RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 MED23Q9ULK4 1368 aa16.04■□□□□ 0.16
HLA-DMB-258ENST00000418107 AK9Q5TCS8 1911 aa16.04■□□□□ 0.16
HLA-DMB-258ENST00000418107 ANKRD18BA2A2Z9 1011 aa16.04■□□□□ 0.16
HLA-DMB-258ENST00000418107 SASH1O94885 1247 aa16.04■□□□□ 0.16
HLA-DMB-258ENST00000418107 CSF1RP07333 972 aa16.04■□□□□ 0.16
HLA-DMB-258ENST00000418107 DACT2Q5SW24 774 aa16.04■□□□□ 0.16
HLA-DMB-258ENST00000418107 ZNF296Q8WUU4 475 aaPredicted RBP16.04■□□□□ 0.16
HLA-DMB-258ENST00000418107 ZNF594Q96JF6 807 aaPredicted RBP16.04■□□□□ 0.16
HLA-DMB-258ENST00000418107 OSBPL3Q9H4L5 887 aa16.04■□□□□ 0.16
HLA-DMB-258ENST00000418107 GREM2Q9H772 168 aa16.04■□□□□ 0.16
HLA-DMB-258ENST00000418107 HDAC9Q9UKV0 1011 aa16.04■□□□□ 0.16
HLA-DMB-258ENST00000418107 MINPP1Q9UNW1 487 aa16.04■□□□□ 0.16
HLA-DMB-258ENST00000418107 AOX1Q06278 1338 aa16.03■□□□□ 0.16
HLA-DMB-258ENST00000418107 TRIM6-TRIM34B2RNG4 842 aa16.03■□□□□ 0.16
HLA-DMB-258ENST00000418107 CDC45O75419 566 aa16.03■□□□□ 0.16
HLA-DMB-258ENST00000418107 ANP32AP39687 249 aaKnown RBP16.03■□□□□ 0.16
HLA-DMB-258ENST00000418107 IL15P40933 162 aaPredicted RBP16.03■□□□□ 0.16
HLA-DMB-258ENST00000418107 TFCP2Q12800 502 aa16.03■□□□□ 0.16
HLA-DMB-258ENST00000418107 MKRN3Q13064 507 aaKnown RBP16.03■□□□□ 0.16
HLA-DMB-258ENST00000418107 TSHZ3Q63HK5 1081 aa16.03■□□□□ 0.16
HLA-DMB-258ENST00000418107 TTLL11Q8NHH1 800 aa16.03■□□□□ 0.16
HLA-DMB-258ENST00000418107 BSDC1Q9NW68 430 aaPredicted RBP16.03■□□□□ 0.16
HLA-DMB-258ENST00000418107 PCDH10Q9P2E7 1040 aa16.03■□□□□ 0.16
HLA-DMB-258ENST00000418107 STAP2Q9UGK3 403 aa16.03■□□□□ 0.16
HLA-DMB-258ENST00000418107 EYA2O00167 538 aa16.02■□□□□ 0.16
HLA-DMB-258ENST00000418107 WNT10BO00744 389 aa16.02■□□□□ 0.16
HLA-DMB-258ENST00000418107 ERC2O15083 957 aa16.02■□□□□ 0.16
HLA-DMB-258ENST00000418107 GSPT1P15170 499 aaKnown RBP16.02■□□□□ 0.16
HLA-DMB-258ENST00000418107 CASC1Q6TDU7 716 aa16.02■□□□□ 0.16
HLA-DMB-258ENST00000418107 OGFOD1Q8N543 542 aa16.02■□□□□ 0.16
HLA-DMB-258ENST00000418107 CCDC8Q9H0W5 538 aaPredicted RBP16.02■□□□□ 0.16
HLA-DMB-258ENST00000418107 SALL3Q9BXA9 1300 aa16.02■□□□□ 0.15
HLA-DMB-258ENST00000418107 ITGA6P23229 1130 aa16.01■□□□□ 0.15
HLA-DMB-258ENST00000418107 PKN2Q16513 984 aaKnown RBP16.01■□□□□ 0.15
HLA-DMB-258ENST00000418107 TXNRD3Q86VQ6 643 aa16.01■□□□□ 0.15
HLA-DMB-258ENST00000418107 RILPL2Q969X0 211 aa16.01■□□□□ 0.15
HLA-DMB-258ENST00000418107 CEP126Q9P2H0 1117 aa16.01■□□□□ 0.15
HLA-DMB-258ENST00000418107 ZNF646O15015 1829 aaPredicted RBP16.01■□□□□ 0.15
HLA-DMB-258ENST00000418107 TTC41PQ6P2S7 1318 aa16.01■□□□□ 0.15
HLA-DMB-258ENST00000418107 MYO3BQ8WXR4 1341 aa16.01■□□□□ 0.15
HLA-DMB-258ENST00000418107 EIF5BO60841 1220 aaKnown RBP16■□□□□ 0.15
HLA-DMB-258ENST00000418107 SDSP20132 328 aa16■□□□□ 0.15
HLA-DMB-258ENST00000418107 NF2P35240 595 aa16■□□□□ 0.15
HLA-DMB-258ENST00000418107 TM4SF4P48230 202 aa16■□□□□ 0.15
HLA-DMB-258ENST00000418107 PRKG1Q13976 671 aa16■□□□□ 0.15
HLA-DMB-258ENST00000418107 LRRC24Q50LG9 513 aa16■□□□□ 0.15
HLA-DMB-258ENST00000418107 STRIP1Q5VSL9 837 aa16■□□□□ 0.15
HLA-DMB-258ENST00000418107 PRPF38BQ5VTL8 546 aaKnown RBP16■□□□□ 0.15
HLA-DMB-258ENST00000418107 COA1Q9GZY4 146 aa16■□□□□ 0.15
HLA-DMB-258ENST00000418107 CNNM1Q9NRU3 951 aa16■□□□□ 0.15
HLA-DMB-258ENST00000418107 GPR25O00155 361 aa16■□□□□ 0.15
HLA-DMB-258ENST00000418107 GLRX3O76003 335 aaKnown RBP16■□□□□ 0.15
HLA-DMB-258ENST00000418107 CIAO1O76071 339 aa16■□□□□ 0.15
HLA-DMB-258ENST00000418107 MFAP1P55081 439 aaKnown RBP16■□□□□ 0.15
HLA-DMB-258ENST00000418107 TNNI3KQ59H18 835 aa16■□□□□ 0.15
HLA-DMB-258ENST00000418107 LDHAL6AQ6ZMR3 332 aa16■□□□□ 0.15
HLA-DMB-258ENST00000418107 EAF2Q96CJ1 260 aaPredicted RBP16■□□□□ 0.15
HLA-DMB-258ENST00000418107 NEUROD6Q96NK8 337 aa16■□□□□ 0.15
HLA-DMB-258ENST00000418107 ECHDC1Q9NTX5 307 aa16■□□□□ 0.15
HLA-DMB-258ENST00000418107 FBXO3Q9UK99 471 aa16■□□□□ 0.15
HLA-DMB-258ENST00000418107 FPGT-TNNI3KV9GXZ4 949 aa16■□□□□ 0.15
HLA-DMB-258ENST00000418107 SEC24BO95487 1268 aa15.99■□□□□ 0.15
HLA-DMB-258ENST00000418107 KLRK1P26718 216 aa15.99■□□□□ 0.15
HLA-DMB-258ENST00000418107 TBC1D9Q6ZT07 1266 aa15.99■□□□□ 0.15
HLA-DMB-258ENST00000418107 ATG9AQ7Z3C6 839 aa15.99■□□□□ 0.15
HLA-DMB-258ENST00000418107 KIAA0825Q8IV33 1275 aa15.99■□□□□ 0.15
HLA-DMB-258ENST00000418107 PUS3Q9BZE2 481 aaKnown RBP15.99■□□□□ 0.15
HLA-DMB-258ENST00000418107 MAP4K4O95819 1239 aaPredicted RBP15.98■□□□□ 0.15
HLA-DMB-258ENST00000418107 IGHMBP2P38935 993 aaKnown RBP15.98■□□□□ 0.15
HLA-DMB-258ENST00000418107 SREBF2Q12772 1141 aa15.98■□□□□ 0.15
HLA-DMB-258ENST00000418107 METTL24Q5JXM2 366 aa15.98■□□□□ 0.15
HLA-DMB-258ENST00000418107 TTLL5Q6EMB2 1281 aa15.98■□□□□ 0.15
HLA-DMB-258ENST00000418107 ARMC9Q7Z3E5 817 aa15.98■□□□□ 0.15
HLA-DMB-258ENST00000418107 R3HDMLQ9H3Y0 253 aa15.98■□□□□ 0.15
HLA-DMB-258ENST00000418107 AKAP2Q9Y2D5 859 aa15.98■□□□□ 0.15
HLA-DMB-258ENST00000418107 LEMD3Q9Y2U8 911 aa15.98■□□□□ 0.15
HLA-DMB-258ENST00000418107 ZNF804BA4D1E1 1349 aa15.97■□□□□ 0.15
HLA-DMB-258ENST00000418107 NOM1Q5C9Z4 860 aaKnown RBP15.97■□□□□ 0.15
HLA-DMB-258ENST00000418107 FBXO46Q6PJ61 603 aaPredicted RBP15.97■□□□□ 0.15
HLA-DMB-258ENST00000418107 APOBEC3FQ8IUX4 373 aaKnown RBP15.97■□□□□ 0.15
HLA-DMB-258ENST00000418107 MPHOSPH8Q99549 860 aa15.97■□□□□ 0.15
HLA-DMB-258ENST00000418107 GPR108Q9NPR9 543 aa15.97■□□□□ 0.15
HLA-DMB-258ENST00000418107 FZD1Q9UP38 647 aa15.97■□□□□ 0.15
HLA-DMB-258ENST00000418107 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.97■□□□□ 0.15
HLA-DMB-258ENST00000418107 A0A1B0GUL6 1792 aa15.97■□□□□ 0.15
HLA-DMB-258ENST00000418107 FKTNO75072 461 aa15.96■□□□□ 0.15
HLA-DMB-258ENST00000418107 GTF2IP78347 998 aa15.96■□□□□ 0.15
HLA-DMB-258ENST00000418107 GORABQ5T7V8 394 aa15.96■□□□□ 0.15
HLA-DMB-258ENST00000418107 PI4K2BQ8TCG2 481 aa15.96■□□□□ 0.15
HLA-DMB-258ENST00000418107 ZBED3Q96IU2 234 aaPredicted RBP15.96■□□□□ 0.15
HLA-DMB-258ENST00000418107 ANGEL1Q9UNK9 670 aaKnown RBP15.96■□□□□ 0.15
HLA-DMB-258ENST00000418107 MMP14P50281 582 aa15.95■□□□□ 0.14
HLA-DMB-258ENST00000418107 LDLRAD1Q5T700 205 aa15.95■□□□□ 0.14
HLA-DMB-258ENST00000418107 SPRYD7Q5W111 196 aa15.95■□□□□ 0.14
HLA-DMB-258ENST00000418107 ANKRD2Q9GZV1 360 aa15.95■□□□□ 0.14
HLA-DMB-258ENST00000418107 TLR7Q9NYK1 1049 aaKnown RBP15.95■□□□□ 0.14
HLA-DMB-258ENST00000418107 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.95■□□□□ 0.14
HLA-DMB-258ENST00000418107 KCNJ4P48050 445 aa15.94■□□□□ 0.14
HLA-DMB-258ENST00000418107 DBNDD2Q9BQY9 259 aa15.94■□□□□ 0.14
HLA-DMB-258ENST00000418107 CFHR5Q9BXR6 569 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms