RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 JAG2Q9Y219 1238 aa8.85□□□□□ -0.99
COPS3-202ENST00000417352 LEMD3Q9Y2U8 911 aa8.85□□□□□ -0.99
COPS3-202ENST00000417352 VAMP4O75379 141 aa8.84□□□□□ -0.99
COPS3-202ENST00000417352 KLRK1P26718 216 aa8.84□□□□□ -0.99
COPS3-202ENST00000417352 MLLT1Q03111 559 aaPredicted RBP8.84□□□□□ -0.99
COPS3-202ENST00000417352 CCDC57Q2TAC2 916 aa8.84□□□□□ -0.99
COPS3-202ENST00000417352 WDR63Q8IWG1 891 aa8.84□□□□□ -0.99
COPS3-202ENST00000417352 CNNM1Q9NRU3 951 aa8.84□□□□□ -0.99
COPS3-202ENST00000417352 MED23Q9ULK4 1368 aa8.84□□□□□ -0.99
COPS3-202ENST00000417352 IL16Q14005 1332 aa8.83□□□□□ -1
COPS3-202ENST00000417352 MYO3BQ8WXR4 1341 aa8.83□□□□□ -1
COPS3-202ENST00000417352 FAM155AB1AL88 458 aaPredicted RBP8.83□□□□□ -1
COPS3-202ENST00000417352 SNAP23O00161 211 aa8.83□□□□□ -1
COPS3-202ENST00000417352 MYO1BO43795 1136 aa8.83□□□□□ -1
COPS3-202ENST00000417352 SLC34A2O95436 690 aa8.83□□□□□ -1
COPS3-202ENST00000417352 LSM11P83369 360 aaKnown RBP eCLIP8.83□□□□□ -1
COPS3-202ENST00000417352 DLGAP5Q15398 846 aa8.83□□□□□ -1
COPS3-202ENST00000417352 DACT2Q5SW24 774 aa8.83□□□□□ -1
COPS3-202ENST00000417352 STRIP1Q5VSL9 837 aa8.83□□□□□ -1
COPS3-202ENST00000417352 LMBR1LQ6UX01 489 aa8.83□□□□□ -1
COPS3-202ENST00000417352 LDHAL6AQ6ZMR3 332 aa8.83□□□□□ -1
COPS3-202ENST00000417352 ZNF804AQ7Z570 1209 aa8.83□□□□□ -1
COPS3-202ENST00000417352 ZNF594Q96JF6 807 aaPredicted RBP8.83□□□□□ -1
COPS3-202ENST00000417352 CSRNP1Q96S65 589 aa8.83□□□□□ -1
COPS3-202ENST00000417352 PCDHGA4Q9Y5G9 962 aa8.83□□□□□ -1
COPS3-202ENST00000417352 WNT10BO00744 389 aa8.82□□□□□ -1
COPS3-202ENST00000417352 FRAT2O75474 233 aaPredicted RBP8.82□□□□□ -1
COPS3-202ENST00000417352 PPP1R37O75864 691 aa8.82□□□□□ -1
COPS3-202ENST00000417352 TBC1D8O95759 1140 aa8.82□□□□□ -1
COPS3-202ENST00000417352 SLC10A3P09131 477 aa8.82□□□□□ -1
COPS3-202ENST00000417352 ARMC9Q7Z3E5 817 aa8.82□□□□□ -1
COPS3-202ENST00000417352 RASAL3Q86YV0 1011 aa8.82□□□□□ -1
COPS3-202ENST00000417352 GMLQ99445 158 aa8.82□□□□□ -1
COPS3-202ENST00000417352 VEZTQ9HBM0 779 aa8.82□□□□□ -1
COPS3-202ENST00000417352 ANGEL1Q9UNK9 670 aaKnown RBP8.82□□□□□ -1
COPS3-202ENST00000417352 LHX6Q9UPM6 363 aa8.82□□□□□ -1
COPS3-202ENST00000417352 THSD7BQ9C0I4 1608 aa8.82□□□□□ -1
COPS3-202ENST00000417352 PITPNM2Q9BZ72 1349 aa8.81□□□□□ -1
COPS3-202ENST00000417352 CACNA1FO60840 1977 aa8.81□□□□□ -1
COPS3-202ENST00000417352 CLRN2A0PK11 232 aa8.81□□□□□ -1
COPS3-202ENST00000417352 CSF1RP07333 972 aa8.81□□□□□ -1
COPS3-202ENST00000417352 FKBP1BP68106 108 aa8.81□□□□□ -1
COPS3-202ENST00000417352 FOXO4P98177 505 aa8.81□□□□□ -1
COPS3-202ENST00000417352 VPS37DQ86XT2 251 aa8.81□□□□□ -1
COPS3-202ENST00000417352 APOBEC3FQ8IUX4 373 aaKnown RBP8.81□□□□□ -1
COPS3-202ENST00000417352 SLC10A4Q96EP9 437 aa8.81□□□□□ -1
COPS3-202ENST00000417352 PLA2G12BQ9BX93 195 aa8.81□□□□□ -1
COPS3-202ENST00000417352 CD209Q9NNX6 404 aa8.81□□□□□ -1
COPS3-202ENST00000417352 SAGE1Q9NXZ1 904 aa8.81□□□□□ -1
COPS3-202ENST00000417352 FZD1Q9UP38 647 aa8.81□□□□□ -1
COPS3-202ENST00000417352 PSME4Q14997 1843 aa8.81□□□□□ -1
COPS3-202ENST00000417352 GRM8O00222 908 aa8.8□□□□□ -1
COPS3-202ENST00000417352 SOX10P56693 466 aa8.8□□□□□ -1
COPS3-202ENST00000417352 PTPN12Q05209 780 aaKnown RBP8.8□□□□□ -1
COPS3-202ENST00000417352 BEND3Q5T5X7 828 aa8.8□□□□□ -1
COPS3-202ENST00000417352 SRCIN1Q9C0H9 1055 aa8.8□□□□□ -1
COPS3-202ENST00000417352 PPP1R12BO60237 982 aaPredicted RBP8.79□□□□□ -1
COPS3-202ENST00000417352 PBX2P40425 430 aa8.79□□□□□ -1
COPS3-202ENST00000417352 GYG1P46976 350 aa8.79□□□□□ -1
COPS3-202ENST00000417352 CASP7P55210 303 aa8.79□□□□□ -1
COPS3-202ENST00000417352 CFAP100Q494V2 611 aa8.79□□□□□ -1
COPS3-202ENST00000417352 EPHA10Q5JZY3 1008 aa8.79□□□□□ -1
COPS3-202ENST00000417352 DEFB129Q9H1M3 183 aa8.79□□□□□ -1
COPS3-202ENST00000417352 IQSEC3Q9UPP2 1182 aaPredicted RBP8.79□□□□□ -1
COPS3-202ENST00000417352 PCDHAC2Q9Y5I4 1007 aa8.79□□□□□ -1
COPS3-202ENST00000417352 PAPPA2Q9BXP8 1791 aa8.78□□□□□ -1
COPS3-202ENST00000417352 HIBADHP31937 336 aaKnown RBP8.78□□□□□ -1
COPS3-202ENST00000417352 SREBF2Q12772 1141 aa8.78□□□□□ -1
COPS3-202ENST00000417352 CHAF1AQ13111 956 aaPredicted RBP8.78□□□□□ -1
COPS3-202ENST00000417352 SUPT20HL1Q3ZLR7 823 aa8.78□□□□□ -1
COPS3-202ENST00000417352 MFSD14BQ5SR56 506 aa8.78□□□□□ -1
COPS3-202ENST00000417352 POTEEQ6S8J3 1075 aa8.78□□□□□ -1
COPS3-202ENST00000417352 CTU1Q7Z7A3 348 aaKnown RBP8.78□□□□□ -1
COPS3-202ENST00000417352 CERS5Q8N5B7 392 aa8.78□□□□□ -1
COPS3-202ENST00000417352 ALDH1L1O75891 902 aa8.77□□□□□ -1.01
COPS3-202ENST00000417352 NBPF7P0C2Y1 421 aaPredicted RBP8.77□□□□□ -1.01
COPS3-202ENST00000417352 MMP14P50281 582 aa8.77□□□□□ -1.01
COPS3-202ENST00000417352 CAVIN4Q5BKX8 364 aa8.77□□□□□ -1.01
COPS3-202ENST00000417352 METTL24Q5JXM2 366 aa8.77□□□□□ -1.01
COPS3-202ENST00000417352 ZNF296Q8WUU4 475 aaPredicted RBP8.77□□□□□ -1.01
COPS3-202ENST00000417352 SUCLG2Q96I99 432 aa8.77□□□□□ -1.01
COPS3-202ENST00000417352 PRMT6Q96LA8 375 aaPredicted RBP8.77□□□□□ -1.01
COPS3-202ENST00000417352 PUS3Q9BZE2 481 aaKnown RBP8.77□□□□□ -1.01
COPS3-202ENST00000417352 TTF2Q9UNY4 1162 aaKnown RBP8.77□□□□□ -1.01
COPS3-202ENST00000417352 TCP10L2B9ZVM9 353 aa8.76□□□□□ -1.01
COPS3-202ENST00000417352 IL1R1P14778 569 aa8.76□□□□□ -1.01
COPS3-202ENST00000417352 IREB2P48200 963 aaKnown RBP8.76□□□□□ -1.01
COPS3-202ENST00000417352 NBPF12Q5TAG4 269 aaPredicted RBP8.76□□□□□ -1.01
COPS3-202ENST00000417352 CLMNQ96JQ2 1002 aa8.76□□□□□ -1.01
COPS3-202ENST00000417352 BICC1Q9H694 974 aaKnown RBP8.76□□□□□ -1.01
COPS3-202ENST00000417352 TDRD3Q9H7E2 651 aaKnown RBP8.76□□□□□ -1.01
COPS3-202ENST00000417352 ZNF609O15014 1411 aa8.75□□□□□ -1.01
COPS3-202ENST00000417352 GPR25O00155 361 aa8.75□□□□□ -1.01
COPS3-202ENST00000417352 FKTNO75072 461 aa8.75□□□□□ -1.01
COPS3-202ENST00000417352 TM4SF4P48230 202 aa8.75□□□□□ -1.01
COPS3-202ENST00000417352 TNFAIP1Q13829 316 aa8.75□□□□□ -1.01
COPS3-202ENST00000417352 UBE4AQ14139 1066 aa8.75□□□□□ -1.01
COPS3-202ENST00000417352 RASA3Q14644 834 aa8.75□□□□□ -1.01
COPS3-202ENST00000417352 SPRYD7Q5W111 196 aa8.75□□□□□ -1.01
COPS3-202ENST00000417352 OTUD7BQ6GQQ9 843 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms