RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 HDLBPQ00341 1268 aaKnown RBP19.37■□□□□ 0.69
ITGB1-204ENST00000417122 TFCP2Q12800 502 aa19.37■□□□□ 0.69
ITGB1-204ENST00000417122 SPDYE2Q495Y8 402 aa19.37■□□□□ 0.69
ITGB1-204ENST00000417122 WDR66Q8TBY9 1149 aa19.37■□□□□ 0.69
ITGB1-204ENST00000417122 TDRD3Q9H7E2 651 aaKnown RBP19.37■□□□□ 0.69
ITGB1-204ENST00000417122 AKAP2Q9Y2D5 859 aa19.37■□□□□ 0.69
ITGB1-204ENST00000417122 SUGT1Q9Y2Z0 365 aa19.37■□□□□ 0.69
ITGB1-204ENST00000417122 MAST3O60307 1309 aa19.36■□□□□ 0.69
ITGB1-204ENST00000417122 ZBTB7BO15156 539 aaPredicted RBP19.36■□□□□ 0.69
ITGB1-204ENST00000417122 ADORA1P30542 326 aa19.36■□□□□ 0.69
ITGB1-204ENST00000417122 PHKA1P46020 1223 aa19.36■□□□□ 0.69
ITGB1-204ENST00000417122 TIMM10P62072 90 aa19.36■□□□□ 0.69
ITGB1-204ENST00000417122 PRKG1Q13976 671 aa19.36■□□□□ 0.69
ITGB1-204ENST00000417122 RASAL3Q86YV0 1011 aa19.36■□□□□ 0.69
ITGB1-204ENST00000417122 TEKT1Q969V4 418 aa19.36■□□□□ 0.69
ITGB1-204ENST00000417122 ZNF70Q9UC06 446 aaPredicted RBP19.36■□□□□ 0.69
ITGB1-204ENST00000417122 A0A1B0GUL7 405 aa19.35■□□□□ 0.69
ITGB1-204ENST00000417122 KIF23Q02241 960 aaPredicted RBP19.35■□□□□ 0.69
ITGB1-204ENST00000417122 G3BP1Q13283 466 aaKnown RBP eCLIP19.35■□□□□ 0.69
ITGB1-204ENST00000417122 ARMC9Q7Z3E5 817 aa19.35■□□□□ 0.69
ITGB1-204ENST00000417122 TNS4Q8IZW8 715 aa19.35■□□□□ 0.69
ITGB1-204ENST00000417122 MRIQ9BWK5 157 aa19.35■□□□□ 0.69
ITGB1-204ENST00000417122 C1orf115Q9H7X2 142 aa19.35■□□□□ 0.69
ITGB1-204ENST00000417122 DENND2AQ9ULE3 1009 aa19.35■□□□□ 0.69
ITGB1-204ENST00000417122 SEMA3EO15041 775 aa19.34■□□□□ 0.69
ITGB1-204ENST00000417122 CA12O43570 354 aa19.34■□□□□ 0.69
ITGB1-204ENST00000417122 ATP8B2P98198 1209 aa19.34■□□□□ 0.69
ITGB1-204ENST00000417122 TNFAIP1Q13829 316 aa19.34■□□□□ 0.69
ITGB1-204ENST00000417122 RASA3Q14644 834 aa19.34■□□□□ 0.69
ITGB1-204ENST00000417122 CCDC102BQ68D86 513 aa19.34■□□□□ 0.69
ITGB1-204ENST00000417122 PANK1Q8TE04 598 aa19.34■□□□□ 0.69
ITGB1-204ENST00000417122 ANGEL1Q9UNK9 670 aaKnown RBP19.34■□□□□ 0.69
ITGB1-204ENST00000417122 POLA2Q14181 598 aa19.33■□□□□ 0.68
ITGB1-204ENST00000417122 SUPT20HL1Q3ZLR7 823 aa19.33■□□□□ 0.68
ITGB1-204ENST00000417122 SSH3Q8TE77 659 aa19.33■□□□□ 0.68
ITGB1-204ENST00000417122 XAGE2Q96GT9 111 aa19.33■□□□□ 0.68
ITGB1-204ENST00000417122 ZDHHC15Q96MV8 337 aa19.33■□□□□ 0.68
ITGB1-204ENST00000417122 TSKSQ9UJT2 592 aa19.33■□□□□ 0.68
ITGB1-204ENST00000417122 FZD1Q9UP38 647 aa19.33■□□□□ 0.68
ITGB1-204ENST00000417122 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.33■□□□□ 0.68
ITGB1-204ENST00000417122 SSC5DA1L4H1 1573 aa19.32■□□□□ 0.68
ITGB1-204ENST00000417122 TCP10L2B9ZVM9 353 aa19.32■□□□□ 0.68
ITGB1-204ENST00000417122 ZBTB22O15209 634 aa19.32■□□□□ 0.68
ITGB1-204ENST00000417122 PPP1R12BO60237 982 aaPredicted RBP19.32■□□□□ 0.68
ITGB1-204ENST00000417122 MS4A1P11836 297 aa19.32■□□□□ 0.68
ITGB1-204ENST00000417122 NBPF12Q5TAG4 269 aaPredicted RBP19.32■□□□□ 0.68
ITGB1-204ENST00000417122 HHIPL2Q6UWX4 724 aa19.32■□□□□ 0.68
ITGB1-204ENST00000417122 NEUROD6Q96NK8 337 aa19.32■□□□□ 0.68
ITGB1-204ENST00000417122 AKAP11Q9UKA4 1901 aa19.31■□□□□ 0.68
ITGB1-204ENST00000417122 SALL1Q9NSC2 1324 aa19.31■□□□□ 0.68
ITGB1-204ENST00000417122 PRDX5P30044 214 aa19.31■□□□□ 0.68
ITGB1-204ENST00000417122 TNNI2P48788 182 aa19.31■□□□□ 0.68
ITGB1-204ENST00000417122 MVPQ14764 893 aaKnown RBP19.31■□□□□ 0.68
ITGB1-204ENST00000417122 CSRNP1Q96S65 589 aa19.31■□□□□ 0.68
ITGB1-204ENST00000417122 LDHBP07195 334 aaKnown RBP19.3■□□□□ 0.68
ITGB1-204ENST00000417122 MAP3K11Q16584 847 aa19.3■□□□□ 0.68
ITGB1-204ENST00000417122 LDLRAD1Q5T700 205 aa19.3■□□□□ 0.68
ITGB1-204ENST00000417122 APOBEC3HQ6NTF7 200 aaKnown RBP19.3■□□□□ 0.68
ITGB1-204ENST00000417122 REM2Q8IYK8 340 aaPredicted RBP19.3■□□□□ 0.68
ITGB1-204ENST00000417122 ZGPATQ8N5A5 531 aaKnown RBP19.3■□□□□ 0.68
ITGB1-204ENST00000417122 TMOD2Q9NZR1 351 aa19.3■□□□□ 0.68
ITGB1-204ENST00000417122 RCAN3Q9UKA8 241 aa19.3■□□□□ 0.68
ITGB1-204ENST00000417122 RASGRF1Q13972 1273 aa19.29■□□□□ 0.68
ITGB1-204ENST00000417122 PDS5AQ29RF7 1337 aaKnown RBP19.28■□□□□ 0.68
ITGB1-204ENST00000417122 SURF6O75683 361 aaKnown RBP19.28■□□□□ 0.68
ITGB1-204ENST00000417122 CACNB3P54284 484 aa19.28■□□□□ 0.68
ITGB1-204ENST00000417122 OS9Q13438 667 aaPredicted RBP19.28■□□□□ 0.68
ITGB1-204ENST00000417122 DIXDC1Q155Q3 683 aa19.28■□□□□ 0.68
ITGB1-204ENST00000417122 GORABQ5T7V8 394 aa19.28■□□□□ 0.68
ITGB1-204ENST00000417122 TEPSINQ96N21 525 aa19.28■□□□□ 0.68
ITGB1-204ENST00000417122 TMEM39BQ9GZU3 492 aa19.28■□□□□ 0.68
ITGB1-204ENST00000417122 SAGE1Q9NXZ1 904 aa19.28■□□□□ 0.68
ITGB1-204ENST00000417122 USP2O75604 605 aaPredicted RBP19.27■□□□□ 0.68
ITGB1-204ENST00000417122 IREB2P48200 963 aaKnown RBP19.27■□□□□ 0.68
ITGB1-204ENST00000417122 MKRN3Q13064 507 aaKnown RBP19.27■□□□□ 0.68
ITGB1-204ENST00000417122 CEP85Q6P2H3 762 aa19.27■□□□□ 0.68
ITGB1-204ENST00000417122 CDAN1Q8IWY9 1227 aa19.27■□□□□ 0.68
ITGB1-204ENST00000417122 RNF186Q9NXI6 227 aa19.27■□□□□ 0.68
ITGB1-204ENST00000417122 DAGLAQ9Y4D2 1042 aa19.27■□□□□ 0.68
ITGB1-204ENST00000417122 MYH2Q9UKX2 1941 aa19.26■□□□□ 0.67
ITGB1-204ENST00000417122 UNCXA6NJT0 531 aa19.26■□□□□ 0.67
ITGB1-204ENST00000417122 TRPA1O75762 1119 aa19.26■□□□□ 0.67
ITGB1-204ENST00000417122 SLC10A4Q96EP9 437 aa19.26■□□□□ 0.67
ITGB1-204ENST00000417122 GPR108Q9NPR9 543 aa19.26■□□□□ 0.67
ITGB1-204ENST00000417122 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.26■□□□□ 0.67
ITGB1-204ENST00000417122 ABCF2Q9UG63 623 aa19.26■□□□□ 0.67
ITGB1-204ENST00000417122 NOP58Q9Y2X3 529 aaKnown RBP19.26■□□□□ 0.67
ITGB1-204ENST00000417122 TNNI3KQ59H18 835 aa19.25■□□□□ 0.67
ITGB1-204ENST00000417122 FKBP1CQ5VVH2 108 aa19.25■□□□□ 0.67
ITGB1-204ENST00000417122 SPRYD7Q5W111 196 aa19.25■□□□□ 0.67
ITGB1-204ENST00000417122 FAM83AQ86UY5 434 aa19.25■□□□□ 0.67
ITGB1-204ENST00000417122 CLMNQ96JQ2 1002 aa19.25■□□□□ 0.67
ITGB1-204ENST00000417122 DDX19BQ9UMR2 479 aa19.25■□□□□ 0.67
ITGB1-204ENST00000417122 COG6Q9Y2V7 657 aa19.25■□□□□ 0.67
ITGB1-204ENST00000417122 FPGT-TNNI3KV9GXZ4 949 aa19.25■□□□□ 0.67
ITGB1-204ENST00000417122 OTOFQ9HC10 1997 aa19.24■□□□□ 0.67
ITGB1-204ENST00000417122 ARID4AP29374 1257 aaPredicted RBP19.24■□□□□ 0.67
ITGB1-204ENST00000417122 SPTY2D1Q68D10 685 aaPredicted RBP19.24■□□□□ 0.67
ITGB1-204ENST00000417122 DZIP1Q86YF9 867 aaKnown RBP19.24■□□□□ 0.67
ITGB1-204ENST00000417122 ANKRD13AQ8IZ07 590 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms