RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 SF3A1Q15459 793 aaKnown RBP11.64□□□□□ -0.55
LINC00494-201ENST00000416742 FAM200AQ8TCP9 573 aa11.64□□□□□ -0.55
LINC00494-201ENST00000416742 STRBPQ96SI9 672 aaKnown RBP11.64□□□□□ -0.55
LINC00494-201ENST00000416742 NAPBQ9H115 298 aa11.64□□□□□ -0.55
LINC00494-201ENST00000416742 TTC12Q9H892 705 aaPredicted RBP11.64□□□□□ -0.55
LINC00494-201ENST00000416742 RCOR1Q9UKL0 485 aa11.64□□□□□ -0.55
LINC00494-201ENST00000416742 HPS5Q9UPZ3 1129 aa11.64□□□□□ -0.55
LINC00494-201ENST00000416742 AP5Z1O43299 807 aa11.64□□□□□ -0.55
LINC00494-201ENST00000416742 CTDSPL2Q05D32 466 aa11.64□□□□□ -0.55
LINC00494-201ENST00000416742 FAM98CQ17RN3 349 aaKnown RBP11.64□□□□□ -0.55
LINC00494-201ENST00000416742 RRP12Q5JTH9 1297 aaKnown RBP11.64□□□□□ -0.55
LINC00494-201ENST00000416742 CCDC73Q6ZRK6 1079 aa11.64□□□□□ -0.55
LINC00494-201ENST00000416742 LRP2BPQ9P2M1 347 aa11.64□□□□□ -0.55
LINC00494-201ENST00000416742 SALL1Q9NSC2 1324 aa11.64□□□□□ -0.55
LINC00494-201ENST00000416742 OFD1O75665 1012 aa11.64□□□□□ -0.55
LINC00494-201ENST00000416742 AK7Q96M32 723 aa11.64□□□□□ -0.55
LINC00494-201ENST00000416742 NBPF3Q9H094 633 aa11.64□□□□□ -0.55
LINC00494-201ENST00000416742 R3HCC1Q9Y3T6 440 aaKnown RBP11.64□□□□□ -0.55
LINC00494-201ENST00000416742 PRKAB2O43741 272 aa11.63□□□□□ -0.55
LINC00494-201ENST00000416742 ZNF500O60304 480 aaPredicted RBP11.63□□□□□ -0.55
LINC00494-201ENST00000416742 EVCP57679 992 aa11.63□□□□□ -0.55
LINC00494-201ENST00000416742 CHRNDQ07001 517 aa11.63□□□□□ -0.55
LINC00494-201ENST00000416742 KIAA2012Q0VF49 1180 aa11.63□□□□□ -0.55
LINC00494-201ENST00000416742 MICU3Q86XE3 530 aa11.63□□□□□ -0.55
LINC00494-201ENST00000416742 IFNL3Q8IZI9 196 aa11.63□□□□□ -0.55
LINC00494-201ENST00000416742 MIGA1Q8NAN2 632 aa11.63□□□□□ -0.55
LINC00494-201ENST00000416742 DNAJC25Q9H1X3 360 aa11.63□□□□□ -0.55
LINC00494-201ENST00000416742 ABCF2Q9UG63 623 aa11.63□□□□□ -0.55
LINC00494-201ENST00000416742 ANGEL1Q9UNK9 670 aaKnown RBP11.63□□□□□ -0.55
LINC00494-201ENST00000416742 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.63□□□□□ -0.55
LINC00494-201ENST00000416742 TCRBV5S4A2TA0A5A2 114 aa11.63□□□□□ -0.55
LINC00494-201ENST00000416742 NTSR2O95665 410 aa11.63□□□□□ -0.55
LINC00494-201ENST00000416742 METAP2P50579 478 aaKnown RBP eCLIP11.63□□□□□ -0.55
LINC00494-201ENST00000416742 STK38Q15208 465 aa11.63□□□□□ -0.55
LINC00494-201ENST00000416742 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.63□□□□□ -0.55
LINC00494-201ENST00000416742 FSIP1Q8NA03 581 aa11.63□□□□□ -0.55
LINC00494-201ENST00000416742 SENP2Q9HC62 589 aa11.63□□□□□ -0.55
LINC00494-201ENST00000416742 PATL2C9JE40 543 aaKnown RBP11.63□□□□□ -0.55
LINC00494-201ENST00000416742 ILDR1Q86SU0 546 aaPredicted RBP11.63□□□□□ -0.55
LINC00494-201ENST00000416742 FBXL16Q8N461 479 aa11.63□□□□□ -0.55
LINC00494-201ENST00000416742 FBXW7Q969H0 707 aa11.63□□□□□ -0.55
LINC00494-201ENST00000416742 AIFM3Q96NN9 605 aa11.63□□□□□ -0.55
LINC00494-201ENST00000416742 MYL10Q9BUA6 226 aa11.63□□□□□ -0.55
LINC00494-201ENST00000416742 CBX8Q9HC52 389 aa11.63□□□□□ -0.55
LINC00494-201ENST00000416742 ZNF652Q9Y2D9 606 aa11.63□□□□□ -0.55
LINC00494-201ENST00000416742 SPATA31A5Q5VU36 1347 aa11.63□□□□□ -0.55
LINC00494-201ENST00000416742 SPATA31A7Q8IWB4 1347 aa11.63□□□□□ -0.55
LINC00494-201ENST00000416742 AKAP11Q9UKA4 1901 aa11.62□□□□□ -0.55
LINC00494-201ENST00000416742 TDO2P48775 406 aa11.62□□□□□ -0.55
LINC00494-201ENST00000416742 COL16A1Q07092 1604 aaPredicted RBP11.62□□□□□ -0.55
LINC00494-201ENST00000416742 SMARCC1Q92922 1105 aaPredicted RBP11.62□□□□□ -0.55
LINC00494-201ENST00000416742 MYH3P11055 1940 aa11.62□□□□□ -0.55
LINC00494-201ENST00000416742 KINO60870 393 aaKnown RBP11.62□□□□□ -0.55
LINC00494-201ENST00000416742 TMEM67Q5HYA8 995 aa11.62□□□□□ -0.55
LINC00494-201ENST00000416742 SYNE3Q6ZMZ3 975 aa11.62□□□□□ -0.55
LINC00494-201ENST00000416742 FBXO18Q8NFZ0 1043 aa11.62□□□□□ -0.55
LINC00494-201ENST00000416742 PHKBQ93100 1093 aa11.62□□□□□ -0.55
LINC00494-201ENST00000416742 GOLPH3LQ9H4A5 285 aa11.62□□□□□ -0.55
LINC00494-201ENST00000416742 SLC4A4Q9Y6R1 1079 aa11.62□□□□□ -0.55
LINC00494-201ENST00000416742 DOT1LQ8TEK3 1739 aa11.62□□□□□ -0.55
LINC00494-201ENST00000416742 NEDD4P46934 1319 aa11.61□□□□□ -0.55
LINC00494-201ENST00000416742 IFIT3O14879 490 aaKnown RBP11.61□□□□□ -0.55
LINC00494-201ENST00000416742 ZNF165P49910 485 aa11.61□□□□□ -0.55
LINC00494-201ENST00000416742 ERFEQ4G0M1 354 aa11.61□□□□□ -0.55
LINC00494-201ENST00000416742 DNTTIP2Q5QJE6 756 aaKnown RBP11.61□□□□□ -0.55
LINC00494-201ENST00000416742 DRC7Q8IY82 874 aa11.61□□□□□ -0.55
LINC00494-201ENST00000416742 EPB41L4AQ9HCS5 686 aaPredicted RBP11.61□□□□□ -0.55
LINC00494-201ENST00000416742 NWD2Q9ULI1 1742 aa11.61□□□□□ -0.55
LINC00494-201ENST00000416742 SLIT2O94813 1529 aa11.61□□□□□ -0.55
LINC00494-201ENST00000416742 MYO5AQ9Y4I1 1855 aaKnown RBP11.61□□□□□ -0.55
LINC00494-201ENST00000416742 A0A087WWV3 80 aa11.61□□□□□ -0.55
LINC00494-201ENST00000416742 WTIPA6NIX2 430 aaPredicted RBP11.61□□□□□ -0.55
LINC00494-201ENST00000416742 SH2B2O14492 632 aaPredicted RBP11.61□□□□□ -0.55
LINC00494-201ENST00000416742 GNL2Q13823 731 aaKnown RBP11.61□□□□□ -0.55
LINC00494-201ENST00000416742 CPLX2Q6PUV4 134 aaKnown RBP11.61□□□□□ -0.55
LINC00494-201ENST00000416742 ERCC4Q92889 916 aaPredicted RBP11.61□□□□□ -0.55
LINC00494-201ENST00000416742 CDC5LQ99459 802 aaKnown RBP11.61□□□□□ -0.55
LINC00494-201ENST00000416742 ZKSCAN3Q9BRR0 538 aa11.61□□□□□ -0.55
LINC00494-201ENST00000416742 CLIC4Q9Y696 253 aa11.61□□□□□ -0.55
LINC00494-201ENST00000416742 GYG1P46976 350 aa11.61□□□□□ -0.55
LINC00494-201ENST00000416742 LCORLQ8N3X6 602 aa11.61□□□□□ -0.55
LINC00494-201ENST00000416742 NGLY1Q96IV0 654 aa11.61□□□□□ -0.55
LINC00494-201ENST00000416742 C8orf37Q96NL8 207 aa11.61□□□□□ -0.55
LINC00494-201ENST00000416742 ALG1Q9BT22 464 aa11.61□□□□□ -0.55
LINC00494-201ENST00000416742 RAI14Q9P0K7 980 aa11.61□□□□□ -0.55
LINC00494-201ENST00000416742 PCDHA7Q9UN72 937 aa11.61□□□□□ -0.55
LINC00494-201ENST00000416742 A0A1B0GVL5 298 aa11.6□□□□□ -0.55
LINC00494-201ENST00000416742 GOLGA8AA7E2F4 631 aa11.6□□□□□ -0.55
LINC00494-201ENST00000416742 ZBTB43O43298 467 aa11.6□□□□□ -0.55
LINC00494-201ENST00000416742 C17orf53Q8N3J3 647 aaPredicted RBP11.6□□□□□ -0.55
LINC00494-201ENST00000416742 CCDC24Q8N4L8 307 aa11.6□□□□□ -0.55
LINC00494-201ENST00000416742 TRIM5Q9C035 493 aa11.6□□□□□ -0.55
LINC00494-201ENST00000416742 ANKRD36CQ5JPF3 1778 aa11.6□□□□□ -0.55
LINC00494-201ENST00000416742 CYP7A1P22680 504 aa11.6□□□□□ -0.55
LINC00494-201ENST00000416742 ATL3Q6DD88 541 aa11.6□□□□□ -0.55
LINC00494-201ENST00000416742 APOA5Q6Q788 366 aa11.6□□□□□ -0.55
LINC00494-201ENST00000416742 C3orf67Q6ZVT6 689 aa11.6□□□□□ -0.55
LINC00494-201ENST00000416742 VPS37DQ86XT2 251 aa11.6□□□□□ -0.55
LINC00494-201ENST00000416742 ANKRD18AQ8IVF6 992 aa11.6□□□□□ -0.55
LINC00494-201ENST00000416742 SDF4Q9BRK5 362 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms