RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 MKRN3Q13064 507 aaKnown RBP18.88■□□□□ 0.61
UBXN4-203ENST00000416538 NBPF12Q5TAG4 269 aaPredicted RBP18.88■□□□□ 0.61
UBXN4-203ENST00000416538 VPS37DQ86XT2 251 aa18.88■□□□□ 0.61
UBXN4-203ENST00000416538 DZIP1LQ8IYY4 767 aaKnown RBP18.88■□□□□ 0.61
UBXN4-203ENST00000416538 TDRD3Q9H7E2 651 aaKnown RBP18.88■□□□□ 0.61
UBXN4-203ENST00000416538 SAGE1Q9NXZ1 904 aa18.88■□□□□ 0.61
UBXN4-203ENST00000416538 ZNF70Q9UC06 446 aaPredicted RBP18.88■□□□□ 0.61
UBXN4-203ENST00000416538 SERPINA10Q9UK55 444 aa18.88■□□□□ 0.61
UBXN4-203ENST00000416538 ANGEL1Q9UNK9 670 aaKnown RBP18.88■□□□□ 0.61
UBXN4-203ENST00000416538 CIAO1O76071 339 aa18.87■□□□□ 0.61
UBXN4-203ENST00000416538 HNRNPUQ00839 825 aaKnown RBP eCLIP18.87■□□□□ 0.61
UBXN4-203ENST00000416538 RASA3Q14644 834 aa18.87■□□□□ 0.61
UBXN4-203ENST00000416538 CAVIN4Q5BKX8 364 aa18.87■□□□□ 0.61
UBXN4-203ENST00000416538 CLMNQ96JQ2 1002 aa18.87■□□□□ 0.61
UBXN4-203ENST00000416538 PPP2R3BQ9Y5P8 575 aa18.87■□□□□ 0.61
UBXN4-203ENST00000416538 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.87■□□□□ 0.61
UBXN4-203ENST00000416538 MYO1BO43795 1136 aa18.86■□□□□ 0.61
UBXN4-203ENST00000416538 IFIT1P09914 478 aaKnown RBP18.86■□□□□ 0.61
UBXN4-203ENST00000416538 MAP3K11Q16584 847 aa18.86■□□□□ 0.61
UBXN4-203ENST00000416538 ARMC9Q7Z3E5 817 aa18.86■□□□□ 0.61
UBXN4-203ENST00000416538 LPIN2Q92539 896 aa18.86■□□□□ 0.61
UBXN4-203ENST00000416538 TEPSINQ96N21 525 aa18.86■□□□□ 0.61
UBXN4-203ENST00000416538 COPRSQ9NQ92 184 aa18.86■□□□□ 0.61
UBXN4-203ENST00000416538 SLC5A1P13866 664 aa18.85■□□□□ 0.61
UBXN4-203ENST00000416538 CACNB3P54284 484 aa18.85■□□□□ 0.61
UBXN4-203ENST00000416538 ATP2B3Q16720 1220 aa18.85■□□□□ 0.61
UBXN4-203ENST00000416538 ATF7IPQ6VMQ6 1270 aa18.85■□□□□ 0.61
UBXN4-203ENST00000416538 CLUAP1Q96AJ1 413 aa18.85■□□□□ 0.61
UBXN4-203ENST00000416538 MCOLN1Q9GZU1 580 aa18.85■□□□□ 0.61
UBXN4-203ENST00000416538 DOCK2Q92608 1830 aa18.85■□□□□ 0.61
UBXN4-203ENST00000416538 ADORA1P30542 326 aa18.84■□□□□ 0.61
UBXN4-203ENST00000416538 MTX1Q13505 466 aa18.84■□□□□ 0.61
UBXN4-203ENST00000416538 SAMD1Q6SPF0 538 aaPredicted RBP18.84■□□□□ 0.61
UBXN4-203ENST00000416538 TBC1D22AQ8WUA7 517 aa18.84■□□□□ 0.61
UBXN4-203ENST00000416538 FRAT1Q92837 279 aaPredicted RBP18.84■□□□□ 0.61
UBXN4-203ENST00000416538 FBXO3Q9UK99 471 aa18.84■□□□□ 0.61
UBXN4-203ENST00000416538 AK9Q5TCS8 1911 aa18.84■□□□□ 0.61
UBXN4-203ENST00000416538 TCP10L2B9ZVM9 353 aa18.83■□□□□ 0.6
UBXN4-203ENST00000416538 FRAT2O75474 233 aaPredicted RBP18.83■□□□□ 0.6
UBXN4-203ENST00000416538 GJA5P36382 358 aa18.83■□□□□ 0.6
UBXN4-203ENST00000416538 PHKA1P46020 1223 aa18.83■□□□□ 0.6
UBXN4-203ENST00000416538 SPRYD7Q5W111 196 aa18.83■□□□□ 0.6
UBXN4-203ENST00000416538 TMEM39BQ9GZU3 492 aa18.83■□□□□ 0.6
UBXN4-203ENST00000416538 MYO5AQ9Y4I1 1855 aaKnown RBP18.83■□□□□ 0.6
UBXN4-203ENST00000416538 USP2O75604 605 aaPredicted RBP18.82■□□□□ 0.6
UBXN4-203ENST00000416538 HDLBPQ00341 1268 aaKnown RBP18.82■□□□□ 0.6
UBXN4-203ENST00000416538 APOBEC3HQ6NTF7 200 aaKnown RBP18.82■□□□□ 0.6
UBXN4-203ENST00000416538 SRGAP3O43295 1099 aa18.81■□□□□ 0.6
UBXN4-203ENST00000416538 PRDX5P30044 214 aa18.81■□□□□ 0.6
UBXN4-203ENST00000416538 IL15P40933 162 aaPredicted RBP18.81■□□□□ 0.6
UBXN4-203ENST00000416538 TM4SF4P48230 202 aa18.81■□□□□ 0.6
UBXN4-203ENST00000416538 DGKZQ13574 1117 aa18.81■□□□□ 0.6
UBXN4-203ENST00000416538 TMEM57Q8N5G2 664 aa18.81■□□□□ 0.6
UBXN4-203ENST00000416538 TEKT1Q969V4 418 aa18.81■□□□□ 0.6
UBXN4-203ENST00000416538 WNK4Q96J92 1243 aa18.81■□□□□ 0.6
UBXN4-203ENST00000416538 ZDHHC15Q96MV8 337 aa18.81■□□□□ 0.6
UBXN4-203ENST00000416538 R3HDMLQ9H3Y0 253 aa18.81■□□□□ 0.6
UBXN4-203ENST00000416538 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.81■□□□□ 0.6
UBXN4-203ENST00000416538 CEP126Q9P2H0 1117 aa18.81■□□□□ 0.6
UBXN4-203ENST00000416538 PNMA6EA0A0J9YXQ4 647 aa18.8■□□□□ 0.6
UBXN4-203ENST00000416538 TBC1D8O95759 1140 aa18.8■□□□□ 0.6
UBXN4-203ENST00000416538 GNAI3P08754 354 aa18.8■□□□□ 0.6
UBXN4-203ENST00000416538 DIXDC1Q155Q3 683 aa18.8■□□□□ 0.6
UBXN4-203ENST00000416538 PPP1R12BO60237 982 aaPredicted RBP18.79■□□□□ 0.6
UBXN4-203ENST00000416538 RLBP1P12271 317 aa18.79■□□□□ 0.6
UBXN4-203ENST00000416538 TNFAIP1Q13829 316 aa18.79■□□□□ 0.6
UBXN4-203ENST00000416538 SUPT20HL1Q3ZLR7 823 aa18.79■□□□□ 0.6
UBXN4-203ENST00000416538 REM2Q8IYK8 340 aaPredicted RBP18.79■□□□□ 0.6
UBXN4-203ENST00000416538 SUGT1Q9Y2Z0 365 aa18.79■□□□□ 0.6
UBXN4-203ENST00000416538 DAGLAQ9Y4D2 1042 aa18.79■□□□□ 0.6
UBXN4-203ENST00000416538 MAST2Q6P0Q8 1798 aa18.78■□□□□ 0.6
UBXN4-203ENST00000416538 ZBED9Q6R2W3 1325 aa18.78■□□□□ 0.6
UBXN4-203ENST00000416538 CDK5RAP2Q96SN8 1893 aa18.78■□□□□ 0.6
UBXN4-203ENST00000416538 IPO8O15397 1037 aaKnown RBP18.78■□□□□ 0.6
UBXN4-203ENST00000416538 TFCP2Q12800 502 aa18.78■□□□□ 0.6
UBXN4-203ENST00000416538 CCDC102BQ68D86 513 aa18.78■□□□□ 0.6
UBXN4-203ENST00000416538 WDR66Q8TBY9 1149 aa18.78■□□□□ 0.6
UBXN4-203ENST00000416538 RPAP1Q9BWH6 1393 aaPredicted RBP18.78■□□□□ 0.6
UBXN4-203ENST00000416538 MAST3O60307 1309 aa18.77■□□□□ 0.6
UBXN4-203ENST00000416538 ZSWIM8A7E2V4 1837 aa18.77■□□□□ 0.6
UBXN4-203ENST00000416538 IGF2BP3O00425 579 aaKnown RBP eCLIP18.77■□□□□ 0.6
UBXN4-203ENST00000416538 RASGRF1Q13972 1273 aa18.77■□□□□ 0.6
UBXN4-203ENST00000416538 ZKSCAN2Q63HK3 967 aa18.77■□□□□ 0.6
UBXN4-203ENST00000416538 HHIPL2Q6UWX4 724 aa18.77■□□□□ 0.6
UBXN4-203ENST00000416538 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.77■□□□□ 0.6
UBXN4-203ENST00000416538 RFX7Q2KHR2 1363 aa18.77■□□□□ 0.6
UBXN4-203ENST00000416538 SALL1Q9NSC2 1324 aa18.76■□□□□ 0.59
UBXN4-203ENST00000416538 A0A1B0GUL7 405 aa18.76■□□□□ 0.59
UBXN4-203ENST00000416538 ZBTB48P10074 688 aaPredicted RBP18.76■□□□□ 0.59
UBXN4-203ENST00000416538 IREB2P48200 963 aaKnown RBP18.76■□□□□ 0.59
UBXN4-203ENST00000416538 TIMM10P62072 90 aa18.76■□□□□ 0.59
UBXN4-203ENST00000416538 ZNF296Q8WUU4 475 aaPredicted RBP18.76■□□□□ 0.59
UBXN4-203ENST00000416538 SLC10A4Q96EP9 437 aa18.76■□□□□ 0.59
UBXN4-203ENST00000416538 MRIQ9BWK5 157 aa18.76■□□□□ 0.59
UBXN4-203ENST00000416538 ELP3Q9H9T3 547 aa18.76■□□□□ 0.59
UBXN4-203ENST00000416538 HDAC5Q9UQL6 1122 aa18.76■□□□□ 0.59
UBXN4-203ENST00000416538 PTPRFP10586 1907 aa18.75■□□□□ 0.59
UBXN4-203ENST00000416538 CCDC85CA6NKD9 419 aa18.75■□□□□ 0.59
UBXN4-203ENST00000416538 ZBTB22O15209 634 aa18.75■□□□□ 0.59
UBXN4-203ENST00000416538 GNAI2P04899 355 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms