RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 LRSAM1Q6UWE0 723 aa12.06□□□□□ -0.48
COL12A1-203ENST00000416123 SBNO1A3KN83 1393 aa12.06□□□□□ -0.48
COL12A1-203ENST00000416123 DDX39AO00148 427 aaKnown RBP12.06□□□□□ -0.48
COL12A1-203ENST00000416123 CALML3P27482 149 aa12.06□□□□□ -0.48
COL12A1-203ENST00000416123 SEC24BO95487 1268 aa12.05□□□□□ -0.48
COL12A1-203ENST00000416123 DCAF17Q5H9S7 520 aaPredicted RBP12.05□□□□□ -0.48
COL12A1-203ENST00000416123 DHX32Q7L7V1 743 aaKnown RBP12.05□□□□□ -0.48
COL12A1-203ENST00000416123 FNBP4Q8N3X1 1017 aaPredicted RBP12.05□□□□□ -0.48
COL12A1-203ENST00000416123 FAM227BQ96M60 508 aa12.05□□□□□ -0.48
COL12A1-203ENST00000416123 PZPP20742 1482 aa12.05□□□□□ -0.48
COL12A1-203ENST00000416123 DPP8Q6V1X1 898 aaPredicted RBP12.05□□□□□ -0.48
COL12A1-203ENST00000416123 MCM3P25205 808 aa12.05□□□□□ -0.48
COL12A1-203ENST00000416123 NAA15Q9BXJ9 866 aaKnown RBP12.05□□□□□ -0.48
COL12A1-203ENST00000416123 NCBP1Q09161 790 aaKnown RBP12.05□□□□□ -0.48
COL12A1-203ENST00000416123 PSMA7O14818 248 aa12.05□□□□□ -0.48
COL12A1-203ENST00000416123 UBXN1Q04323 297 aa12.05□□□□□ -0.48
COL12A1-203ENST00000416123 KRT79Q5XKE5 535 aa12.05□□□□□ -0.48
COL12A1-203ENST00000416123 CTR9Q6PD62 1173 aa12.05□□□□□ -0.48
COL12A1-203ENST00000416123 EEF2P13639 858 aaKnown RBP12.05□□□□□ -0.48
COL12A1-203ENST00000416123 USP19O94966 1318 aa12.04□□□□□ -0.48
COL12A1-203ENST00000416123 DBNDD2Q9BQY9 259 aa12.04□□□□□ -0.48
COL12A1-203ENST00000416123 PODXL2Q9NZ53 605 aa12.04□□□□□ -0.48
COL12A1-203ENST00000416123 HOMER2Q9NSB8 354 aa12.04□□□□□ -0.48
COL12A1-203ENST00000416123 PRDM1O75626 825 aa12.04□□□□□ -0.48
COL12A1-203ENST00000416123 SUCLG2Q96I99 432 aa12.04□□□□□ -0.48
COL12A1-203ENST00000416123 SLAIN2Q9P270 581 aa12.04□□□□□ -0.48
COL12A1-203ENST00000416123 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.04□□□□□ -0.48
COL12A1-203ENST00000416123 SHANK2Q9UPX8 1470 aa12.04□□□□□ -0.48
COL12A1-203ENST00000416123 C8orf34Q49A92 452 aa12.04□□□□□ -0.48
COL12A1-203ENST00000416123 NCOA5Q9HCD5 579 aaKnown RBP12.04□□□□□ -0.48
COL12A1-203ENST00000416123 ZFP91Q96JP5 570 aaPredicted RBP12.04□□□□□ -0.48
COL12A1-203ENST00000416123 BMP15O95972 392 aa12.04□□□□□ -0.48
COL12A1-203ENST00000416123 MYCLP12524 364 aaPredicted RBP12.04□□□□□ -0.48
COL12A1-203ENST00000416123 MAPK8IP2Q13387 824 aaPredicted RBP12.04□□□□□ -0.48
COL12A1-203ENST00000416123 RNF187Q5TA31 235 aaPredicted RBP12.04□□□□□ -0.48
COL12A1-203ENST00000416123 DNAJC10Q8IXB1 793 aa12.04□□□□□ -0.48
COL12A1-203ENST00000416123 LARGE2Q8N3Y3 721 aa12.04□□□□□ -0.48
COL12A1-203ENST00000416123 PAIP2Q9BPZ3 127 aaKnown RBP12.04□□□□□ -0.48
COL12A1-203ENST00000416123 GNA11P29992 359 aa12.03□□□□□ -0.48
COL12A1-203ENST00000416123 RBM28Q9NW13 759 aaKnown RBP12.03□□□□□ -0.48
COL12A1-203ENST00000416123 A0A1B0GVL5 298 aa12.03□□□□□ -0.48
COL12A1-203ENST00000416123 SHTN1A0MZ66 631 aa12.03□□□□□ -0.48
COL12A1-203ENST00000416123 SMC1AQ14683 1233 aaKnown RBP12.03□□□□□ -0.48
COL12A1-203ENST00000416123 TMOD4Q9NZQ9 345 aa12.03□□□□□ -0.48
COL12A1-203ENST00000416123 SH3TC1Q8TE82 1336 aa12.03□□□□□ -0.48
COL12A1-203ENST00000416123 PLXNC1O60486 1568 aa12.03□□□□□ -0.48
COL12A1-203ENST00000416123 ZBTB7BO15156 539 aaPredicted RBP12.03□□□□□ -0.48
COL12A1-203ENST00000416123 TRAF1Q13077 416 aa12.03□□□□□ -0.48
COL12A1-203ENST00000416123 EAPPQ56P03 285 aaPredicted RBP12.03□□□□□ -0.48
COL12A1-203ENST00000416123 CTAGE1Q96RT6 745 aa12.03□□□□□ -0.48
COL12A1-203ENST00000416123 TBX22Q9Y458 520 aa12.03□□□□□ -0.48
COL12A1-203ENST00000416123 MYL10Q9BUA6 226 aa12.03□□□□□ -0.48
COL12A1-203ENST00000416123 IMPG2Q9BZV3 1241 aa12.03□□□□□ -0.48
COL12A1-203ENST00000416123 HELLSQ9NRZ9 838 aa12.03□□□□□ -0.48
COL12A1-203ENST00000416123 hCG_1642624A0A1W2PR95 340 aa12.03□□□□□ -0.48
COL12A1-203ENST00000416123 CCDC172P0C7W6 258 aa12.03□□□□□ -0.48
COL12A1-203ENST00000416123 CCDC50Q8IVM0 306 aa12.03□□□□□ -0.48
COL12A1-203ENST00000416123 ZFYVE16Q7Z3T8 1539 aa12.03□□□□□ -0.48
COL12A1-203ENST00000416123 GPAA1O43292 621 aa12.03□□□□□ -0.48
COL12A1-203ENST00000416123 SLC27A2O14975 620 aa12.03□□□□□ -0.48
COL12A1-203ENST00000416123 CCT6AP40227 531 aaKnown RBP12.03□□□□□ -0.48
COL12A1-203ENST00000416123 KLHL40Q2TBA0 621 aa12.03□□□□□ -0.48
COL12A1-203ENST00000416123 GSTA5Q7RTV2 222 aa12.03□□□□□ -0.48
COL12A1-203ENST00000416123 OTUD6BQ8N6M0 293 aa12.03□□□□□ -0.48
COL12A1-203ENST00000416123 INCENPQ9NQS7 918 aa12.03□□□□□ -0.48
COL12A1-203ENST00000416123 CCDC87Q9NVE4 849 aa12.03□□□□□ -0.48
COL12A1-203ENST00000416123 DISP1Q96F81 1524 aa12.02□□□□□ -0.48
COL12A1-203ENST00000416123 PNMA6EA0A0J9YXQ4 647 aa12.02□□□□□ -0.48
COL12A1-203ENST00000416123 KIAA0753Q2KHM9 967 aa12.02□□□□□ -0.48
COL12A1-203ENST00000416123 TGFBRAP1Q8WUH2 860 aa12.02□□□□□ -0.48
COL12A1-203ENST00000416123 CTNND2Q9UQB3 1225 aa12.02□□□□□ -0.48
COL12A1-203ENST00000416123 PIK3C2GO75747 1445 aa12.02□□□□□ -0.48
COL12A1-203ENST00000416123 SYT1P21579 422 aa12.02□□□□□ -0.48
COL12A1-203ENST00000416123 CAPZA3Q96KX2 299 aa12.02□□□□□ -0.48
COL12A1-203ENST00000416123 MAPK8IP1Q9UQF2 711 aa12.02□□□□□ -0.48
COL12A1-203ENST00000416123 EYA2O00167 538 aa12.02□□□□□ -0.49
COL12A1-203ENST00000416123 IFI16Q16666 785 aaKnown RBP12.02□□□□□ -0.49
COL12A1-203ENST00000416123 TRIM35Q9UPQ4 493 aa12.02□□□□□ -0.49
COL12A1-203ENST00000416123 GINS2Q9Y248 185 aa12.02□□□□□ -0.49
COL12A1-203ENST00000416123 ACTN2P35609 894 aa12.02□□□□□ -0.49
COL12A1-203ENST00000416123 MRPS9P82933 396 aaKnown RBP12.02□□□□□ -0.49
COL12A1-203ENST00000416123 FAM170AA1A519 330 aa12.02□□□□□ -0.49
COL12A1-203ENST00000416123 NEMFO60524 1076 aa12.02□□□□□ -0.49
COL12A1-203ENST00000416123 PIK3AP1Q6ZUJ8 805 aa12.02□□□□□ -0.49
COL12A1-203ENST00000416123 FERMT1Q9BQL6 677 aa12.02□□□□□ -0.49
COL12A1-203ENST00000416123 PROCA1Q8NCQ7 364 aaPredicted RBP12.02□□□□□ -0.49
COL12A1-203ENST00000416123 ARHGEF10LQ9HCE6 1279 aa12.02□□□□□ -0.49
COL12A1-203ENST00000416123 ZMYM4Q5VZL5 1548 aa12.02□□□□□ -0.49
COL12A1-203ENST00000416123 KRT5P13647 590 aa12.02□□□□□ -0.49
COL12A1-203ENST00000416123 RPS6KB1P23443 525 aa12.02□□□□□ -0.49
COL12A1-203ENST00000416123 ARL1P40616 181 aaPredicted RBP12.02□□□□□ -0.49
COL12A1-203ENST00000416123 USP37Q86T82 979 aa12.02□□□□□ -0.49
COL12A1-203ENST00000416123 FAM107BQ9H098 131 aa12.02□□□□□ -0.49
COL12A1-203ENST00000416123 TTC6Q86TZ1 520 aa12.01□□□□□ -0.49
COL12A1-203ENST00000416123 CPXCR1Q8N123 301 aa12.01□□□□□ -0.49
COL12A1-203ENST00000416123 USP26Q9BXU7 913 aa12.01□□□□□ -0.49
COL12A1-203ENST00000416123 FSD2A1L4K1 749 aa12.01□□□□□ -0.49
COL12A1-203ENST00000416123 CYLC1P35663 651 aaPredicted RBP12.01□□□□□ -0.49
COL12A1-203ENST00000416123 TYRO3Q06418 890 aa12.01□□□□□ -0.49
COL12A1-203ENST00000416123 PHKBQ93100 1093 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms