RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 DBNDD2Q9BQY9 259 aa11.21□□□□□ -0.61
CHRNA1-206ENST00000416004 ECHDC1Q9NTX5 307 aa11.21□□□□□ -0.61
CHRNA1-206ENST00000416004 TTC41PQ6P2S7 1318 aa11.21□□□□□ -0.62
CHRNA1-206ENST00000416004 PITPNM2Q9BZ72 1349 aa11.21□□□□□ -0.62
CHRNA1-206ENST00000416004 PDE8BO95263 885 aa11.21□□□□□ -0.62
CHRNA1-206ENST00000416004 IL1R1P14778 569 aa11.21□□□□□ -0.62
CHRNA1-206ENST00000416004 TIMM10P62072 90 aa11.21□□□□□ -0.62
CHRNA1-206ENST00000416004 FKBP1AP62942 108 aaKnown RBP11.21□□□□□ -0.62
CHRNA1-206ENST00000416004 GRM1Q13255 1194 aa11.21□□□□□ -0.62
CHRNA1-206ENST00000416004 PUM3Q15397 648 aaKnown RBP11.21□□□□□ -0.62
CHRNA1-206ENST00000416004 DLGAP5Q15398 846 aa11.21□□□□□ -0.62
CHRNA1-206ENST00000416004 ANGEL2Q5VTE6 544 aaKnown RBP11.21□□□□□ -0.62
CHRNA1-206ENST00000416004 KIAA0825Q8IV33 1275 aa11.21□□□□□ -0.62
CHRNA1-206ENST00000416004 VGLL2Q8N8G2 317 aa11.21□□□□□ -0.62
CHRNA1-206ENST00000416004 GPR108Q9NPR9 543 aa11.21□□□□□ -0.62
CHRNA1-206ENST00000416004 CEP126Q9P2H0 1117 aa11.21□□□□□ -0.62
CHRNA1-206ENST00000416004 MYH13Q9UKX3 1938 aa11.21□□□□□ -0.62
CHRNA1-206ENST00000416004 WTIPA6NIX2 430 aaPredicted RBP11.2□□□□□ -0.62
CHRNA1-206ENST00000416004 CDC45O75419 566 aa11.2□□□□□ -0.62
CHRNA1-206ENST00000416004 KLRK1P26718 216 aa11.2□□□□□ -0.62
CHRNA1-206ENST00000416004 RBM5P52756 815 aaKnown RBP eCLIP11.2□□□□□ -0.62
CHRNA1-206ENST00000416004 MAP2K1Q02750 393 aaPredicted RBP11.2□□□□□ -0.62
CHRNA1-206ENST00000416004 TBC1D22AQ8WUA7 517 aa11.2□□□□□ -0.62
CHRNA1-206ENST00000416004 GMLQ99445 158 aa11.2□□□□□ -0.62
CHRNA1-206ENST00000416004 TLL2Q9Y6L7 1015 aa11.2□□□□□ -0.62
CHRNA1-206ENST00000416004 CEP350Q5VT06 3117 aa11.2□□□□□ -0.62
CHRNA1-206ENST00000416004 WDR33Q9C0J8 1336 aaKnown RBP11.2□□□□□ -0.62
CHRNA1-206ENST00000416004 A0A1B0GUL7 405 aa11.19□□□□□ -0.62
CHRNA1-206ENST00000416004 GLRX3O76003 335 aaKnown RBP11.19□□□□□ -0.62
CHRNA1-206ENST00000416004 ADORA1P30542 326 aa11.19□□□□□ -0.62
CHRNA1-206ENST00000416004 VEGFBP49765 207 aa11.19□□□□□ -0.62
CHRNA1-206ENST00000416004 APOBEC3FQ8IUX4 373 aaKnown RBP11.19□□□□□ -0.62
CHRNA1-206ENST00000416004 HHIPL1Q96JK4 782 aa11.19□□□□□ -0.62
CHRNA1-206ENST00000416004 NEUROD6Q96NK8 337 aa11.19□□□□□ -0.62
CHRNA1-206ENST00000416004 GNL3LQ9NVN8 582 aaKnown RBP11.19□□□□□ -0.62
CHRNA1-206ENST00000416004 ECM29Q5VYK3 1845 aa11.19□□□□□ -0.62
CHRNA1-206ENST00000416004 TRIM6-TRIM34B2RNG4 842 aa11.19□□□□□ -0.62
CHRNA1-206ENST00000416004 SNAP23O00161 211 aa11.19□□□□□ -0.62
CHRNA1-206ENST00000416004 GYG1P46976 350 aa11.19□□□□□ -0.62
CHRNA1-206ENST00000416004 LPIN2Q92539 896 aa11.19□□□□□ -0.62
CHRNA1-206ENST00000416004 RILPL2Q969X0 211 aa11.19□□□□□ -0.62
CHRNA1-206ENST00000416004 GPATCH3Q96I76 525 aa11.19□□□□□ -0.62
CHRNA1-206ENST00000416004 CAPNS2Q96L46 248 aa11.19□□□□□ -0.62
CHRNA1-206ENST00000416004 GBA2Q9HCG7 927 aaPredicted RBP11.19□□□□□ -0.62
CHRNA1-206ENST00000416004 F8W031 263 aaPredicted RBP11.18□□□□□ -0.62
CHRNA1-206ENST00000416004 EGFRP00533 1210 aa11.18□□□□□ -0.62
CHRNA1-206ENST00000416004 HSPA1AP0DMV8 641 aaKnown RBP11.18□□□□□ -0.62
CHRNA1-206ENST00000416004 HSPA1BP0DMV9 641 aaKnown RBP11.18□□□□□ -0.62
CHRNA1-206ENST00000416004 HUNKP57058 714 aa11.18□□□□□ -0.62
CHRNA1-206ENST00000416004 MFSD14BQ5SR56 506 aa11.18□□□□□ -0.62
CHRNA1-206ENST00000416004 CST9Q5W186 159 aa11.18□□□□□ -0.62
CHRNA1-206ENST00000416004 BOLA2Q9H3K6 86 aa11.18□□□□□ -0.62
CHRNA1-206ENST00000416004 MAST3O60307 1309 aa11.18□□□□□ -0.62
CHRNA1-206ENST00000416004 ZNF646O15015 1829 aaPredicted RBP11.17□□□□□ -0.62
CHRNA1-206ENST00000416004 ARAP2Q8WZ64 1704 aa11.17□□□□□ -0.62
CHRNA1-206ENST00000416004 ADM5C9JUS6 153 aa11.17□□□□□ -0.62
CHRNA1-206ENST00000416004 ERC2O15083 957 aa11.17□□□□□ -0.62
CHRNA1-206ENST00000416004 MFAP1P55081 439 aaKnown RBP11.17□□□□□ -0.62
CHRNA1-206ENST00000416004 FKBP1BP68106 108 aa11.17□□□□□ -0.62
CHRNA1-206ENST00000416004 TTLL12Q14166 644 aaPredicted RBP11.17□□□□□ -0.62
CHRNA1-206ENST00000416004 ATP2B3Q16720 1220 aa11.17□□□□□ -0.62
CHRNA1-206ENST00000416004 SAPCD2Q86UD0 394 aa11.17□□□□□ -0.62
CHRNA1-206ENST00000416004 TDRD7Q8NHU6 1098 aaKnown RBP11.17□□□□□ -0.62
CHRNA1-206ENST00000416004 FAM84BQ96KN1 310 aaPredicted RBP11.17□□□□□ -0.62
CHRNA1-206ENST00000416004 MXD3Q9BW11 206 aa11.17□□□□□ -0.62
CHRNA1-206ENST00000416004 AKAP2Q9Y2D5 859 aa11.17□□□□□ -0.62
CHRNA1-206ENST00000416004 NDUFB9Q9Y6M9 179 aa11.17□□□□□ -0.62
CHRNA1-206ENST00000416004 FAM205AQ6ZU69 1335 aa11.17□□□□□ -0.62
CHRNA1-206ENST00000416004 WNT10BO00744 389 aa11.17□□□□□ -0.62
CHRNA1-206ENST00000416004 ATP5JP18859 108 aa11.17□□□□□ -0.62
CHRNA1-206ENST00000416004 FMR1Q06787 632 aaKnown RBP eCLIP11.17□□□□□ -0.62
CHRNA1-206ENST00000416004 CHAF1AQ13111 956 aaPredicted RBP11.17□□□□□ -0.62
CHRNA1-206ENST00000416004 EDC3Q96F86 508 aaKnown RBP11.17□□□□□ -0.62
CHRNA1-206ENST00000416004 CDCA5Q96FF9 252 aa11.17□□□□□ -0.62
CHRNA1-206ENST00000416004 XAGE2Q96GT9 111 aa11.17□□□□□ -0.62
CHRNA1-206ENST00000416004 FGFR2P21802 821 aa11.16□□□□□ -0.62
CHRNA1-206ENST00000416004 MAP2K2P36507 400 aa11.16□□□□□ -0.62
CHRNA1-206ENST00000416004 TNFAIP1Q13829 316 aa11.16□□□□□ -0.62
CHRNA1-206ENST00000416004 NBPF9Q3BBW0 867 aa11.16□□□□□ -0.62
CHRNA1-206ENST00000416004 CFAP100Q494V2 611 aa11.16□□□□□ -0.62
CHRNA1-206ENST00000416004 CYP4F22Q6NT55 531 aa11.16□□□□□ -0.62
CHRNA1-206ENST00000416004 CCDC102AQ96A19 550 aa11.16□□□□□ -0.62
CHRNA1-206ENST00000416004 TTF2Q9UNY4 1162 aaKnown RBP11.16□□□□□ -0.62
CHRNA1-206ENST00000416004 IRS2Q9Y4H2 1338 aa11.16□□□□□ -0.62
CHRNA1-206ENST00000416004 COL1A1P02452 1464 aaPredicted RBP11.16□□□□□ -0.62
CHRNA1-206ENST00000416004 CHMLP26374 656 aa11.15□□□□□ -0.62
CHRNA1-206ENST00000416004 TNNI2P48788 182 aa11.15□□□□□ -0.62
CHRNA1-206ENST00000416004 NOGQ13253 232 aa11.15□□□□□ -0.62
CHRNA1-206ENST00000416004 FBXO33Q7Z6M2 555 aa11.15□□□□□ -0.62
CHRNA1-206ENST00000416004 MTMR14Q8NCE2 650 aa11.15□□□□□ -0.62
CHRNA1-206ENST00000416004 WDR66Q8TBY9 1149 aa11.15□□□□□ -0.62
CHRNA1-206ENST00000416004 TMOD2Q9NZR1 351 aa11.15□□□□□ -0.62
CHRNA1-206ENST00000416004 JAG2Q9Y219 1238 aa11.15□□□□□ -0.62
CHRNA1-206ENST00000416004 PPP2R3BQ9Y5P8 575 aa11.15□□□□□ -0.62
CHRNA1-206ENST00000416004 CTCFP49711 727 aaPredicted RBP11.15□□□□□ -0.63
CHRNA1-206ENST00000416004 ZNF157P51786 506 aaPredicted RBP11.15□□□□□ -0.63
CHRNA1-206ENST00000416004 GORABQ5T7V8 394 aa11.15□□□□□ -0.63
CHRNA1-206ENST00000416004 RGMBQ6NW40 437 aa11.15□□□□□ -0.63
CHRNA1-206ENST00000416004 ARMC9Q7Z3E5 817 aa11.15□□□□□ -0.63
CHRNA1-206ENST00000416004 IPO9Q96P70 1041 aaKnown RBP11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms