RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 TICAM2Q86XR7 235 aa17.52■□□□□ 0.4
SGCE-202ENST00000415788 CNTROBQ8N137 903 aa17.52■□□□□ 0.4
SGCE-202ENST00000415788 OGFOD1Q8N543 542 aa17.52■□□□□ 0.4
SGCE-202ENST00000415788 L3MBTL3Q96JM7 780 aaPredicted RBP17.52■□□□□ 0.4
SGCE-202ENST00000415788 MXD3Q9BW11 206 aa17.52■□□□□ 0.4
SGCE-202ENST00000415788 ANTXR1Q9H6X2 564 aa17.52■□□□□ 0.4
SGCE-202ENST00000415788 HDAC9Q9UKV0 1011 aa17.52■□□□□ 0.4
SGCE-202ENST00000415788 ZBTB12Q9Y330 459 aaPredicted RBP17.52■□□□□ 0.4
SGCE-202ENST00000415788 NDUFB9Q9Y6M9 179 aa17.52■□□□□ 0.4
SGCE-202ENST00000415788 UTRNP46939 3433 aa17.52■□□□□ 0.39
SGCE-202ENST00000415788 USP17L8P0C7I0 530 aa17.52■□□□□ 0.39
SGCE-202ENST00000415788 PRDX5P30044 214 aa17.52■□□□□ 0.39
SGCE-202ENST00000415788 GMPSP49915 693 aaPredicted RBP17.52■□□□□ 0.39
SGCE-202ENST00000415788 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.52■□□□□ 0.39
SGCE-202ENST00000415788 PIH1D3Q9NQM4 214 aaKnown RBP17.52■□□□□ 0.39
SGCE-202ENST00000415788 RAI14Q9P0K7 980 aa17.52■□□□□ 0.39
SGCE-202ENST00000415788 IDH1O75874 414 aaKnown RBP17.51■□□□□ 0.39
SGCE-202ENST00000415788 L1TD1Q5T7N2 865 aaKnown RBP17.51■□□□□ 0.39
SGCE-202ENST00000415788 DZIP1Q86YF9 867 aaKnown RBP17.51■□□□□ 0.39
SGCE-202ENST00000415788 KIAA0825Q8IV33 1275 aa17.51■□□□□ 0.39
SGCE-202ENST00000415788 SLF2Q8IX21 1173 aa17.51■□□□□ 0.39
SGCE-202ENST00000415788 KBTBD3Q8NAB2 608 aa17.51■□□□□ 0.39
SGCE-202ENST00000415788 EDC3Q96F86 508 aaKnown RBP17.51■□□□□ 0.39
SGCE-202ENST00000415788 MRIQ9BWK5 157 aa17.51■□□□□ 0.39
SGCE-202ENST00000415788 TTF2Q9UNY4 1162 aaKnown RBP17.51■□□□□ 0.39
SGCE-202ENST00000415788 LMOD1P29536 600 aaPredicted RBP17.5■□□□□ 0.39
SGCE-202ENST00000415788 HDLBPQ00341 1268 aaKnown RBP17.5■□□□□ 0.39
SGCE-202ENST00000415788 ZSCAN25Q6NSZ9 544 aa17.5■□□□□ 0.39
SGCE-202ENST00000415788 ZNF646O15015 1829 aaPredicted RBP17.5■□□□□ 0.39
SGCE-202ENST00000415788 TRIM6-TRIM34B2RNG4 842 aa17.5■□□□□ 0.39
SGCE-202ENST00000415788 SCNN1DP51172 638 aa17.5■□□□□ 0.39
SGCE-202ENST00000415788 GSTO1P78417 241 aa17.5■□□□□ 0.39
SGCE-202ENST00000415788 UBE2Q2Q8WVN8 375 aa17.5■□□□□ 0.39
SGCE-202ENST00000415788 GPRC5DQ9NZD1 345 aa17.5■□□□□ 0.39
SGCE-202ENST00000415788 F8W031 263 aaPredicted RBP17.49■□□□□ 0.39
SGCE-202ENST00000415788 H7C1D1 291 aa17.49■□□□□ 0.39
SGCE-202ENST00000415788 MAP4K4O95819 1239 aaPredicted RBP17.49■□□□□ 0.39
SGCE-202ENST00000415788 GSPT1P15170 499 aaKnown RBP17.49■□□□□ 0.39
SGCE-202ENST00000415788 ZNF280AP59817 542 aaPredicted RBP17.49■□□□□ 0.39
SGCE-202ENST00000415788 GRIK5Q16478 980 aa17.49■□□□□ 0.39
SGCE-202ENST00000415788 BMP2KLQ5H9B9 411 aa17.49■□□□□ 0.39
SGCE-202ENST00000415788 SERPINA10Q9UK55 444 aa17.49■□□□□ 0.39
SGCE-202ENST00000415788 RFX7Q2KHR2 1363 aa17.49■□□□□ 0.39
SGCE-202ENST00000415788 IQCA1LA6NCM1 817 aa17.48■□□□□ 0.39
SGCE-202ENST00000415788 ZFYP08048 801 aaPredicted RBP17.48■□□□□ 0.39
SGCE-202ENST00000415788 MECOMQ03112 1051 aa17.48■□□□□ 0.39
SGCE-202ENST00000415788 MICALL2Q8IY33 904 aa17.48■□□□□ 0.39
SGCE-202ENST00000415788 TEKT1Q969V4 418 aa17.48■□□□□ 0.39
SGCE-202ENST00000415788 RILPL2Q969X0 211 aa17.48■□□□□ 0.39
SGCE-202ENST00000415788 NSUN4Q96CB9 384 aaKnown RBP17.48■□□□□ 0.39
SGCE-202ENST00000415788 FSD1Q9BTV5 496 aa17.48■□□□□ 0.39
SGCE-202ENST00000415788 CNOT7Q9UIV1 285 aaKnown RBP17.48■□□□□ 0.39
SGCE-202ENST00000415788 LDHCP07864 332 aa17.48■□□□□ 0.39
SGCE-202ENST00000415788 HHIPL2Q6UWX4 724 aa17.48■□□□□ 0.39
SGCE-202ENST00000415788 SLC9C2Q5TAH2 1124 aa17.47■□□□□ 0.39
SGCE-202ENST00000415788 NAA16Q6N069 864 aaPredicted RBP17.47■□□□□ 0.39
SGCE-202ENST00000415788 FAM163AQ96GL9 167 aaPredicted RBP17.47■□□□□ 0.39
SGCE-202ENST00000415788 SDSP20132 328 aa17.46■□□□□ 0.39
SGCE-202ENST00000415788 UBE3CQ15386 1083 aa17.46■□□□□ 0.39
SGCE-202ENST00000415788 HACL1Q9UJ83 578 aa17.46■□□□□ 0.39
SGCE-202ENST00000415788 PDE6AP16499 860 aa17.46■□□□□ 0.38
SGCE-202ENST00000415788 ADD2P35612 726 aa17.46■□□□□ 0.38
SGCE-202ENST00000415788 MAGEB6Q8N7X4 407 aa17.46■□□□□ 0.38
SGCE-202ENST00000415788 MTMR14Q8NCE2 650 aa17.46■□□□□ 0.38
SGCE-202ENST00000415788 ZDHHC15Q96MV8 337 aa17.46■□□□□ 0.38
SGCE-202ENST00000415788 MYOZ2Q9NPC6 264 aa17.46■□□□□ 0.38
SGCE-202ENST00000415788 GAKO14976 1311 aa17.45■□□□□ 0.38
SGCE-202ENST00000415788 WDR90Q96KV7 1748 aa17.45■□□□□ 0.38
SGCE-202ENST00000415788 HIP1O00291 1037 aa17.45■□□□□ 0.38
SGCE-202ENST00000415788 CRKP46108 304 aa17.45■□□□□ 0.38
SGCE-202ENST00000415788 UPF2Q9HAU5 1272 aaKnown RBP17.45■□□□□ 0.38
SGCE-202ENST00000415788 ADARB2Q9NS39 739 aaKnown RBP17.45■□□□□ 0.38
SGCE-202ENST00000415788 MROH7-TTC4A0A0A0MT08 1334 aa17.44■□□□□ 0.38
SGCE-202ENST00000415788 DOCK2Q92608 1830 aa17.44■□□□□ 0.38
SGCE-202ENST00000415788 RNF113AO15541 343 aaKnown RBP17.44■□□□□ 0.38
SGCE-202ENST00000415788 CYP7A1P22680 504 aa17.44■□□□□ 0.38
SGCE-202ENST00000415788 EPS15P42566 896 aa17.44■□□□□ 0.38
SGCE-202ENST00000415788 DLGAP5Q15398 846 aa17.44■□□□□ 0.38
SGCE-202ENST00000415788 DIXDC1Q155Q3 683 aa17.44■□□□□ 0.38
SGCE-202ENST00000415788 CFAP100Q494V2 611 aa17.44■□□□□ 0.38
SGCE-202ENST00000415788 CERS3Q8IU89 383 aa17.44■□□□□ 0.38
SGCE-202ENST00000415788 ZNF384Q8TF68 577 aa17.44■□□□□ 0.38
SGCE-202ENST00000415788 MAST2Q6P0Q8 1798 aa17.44■□□□□ 0.38
SGCE-202ENST00000415788 RBM5P52756 815 aaKnown RBP eCLIP17.44■□□□□ 0.38
SGCE-202ENST00000415788 NOL10Q9BSC4 688 aaKnown RBP17.44■□□□□ 0.38
SGCE-202ENST00000415788 DAGLAQ9Y4D2 1042 aa17.44■□□□□ 0.38
SGCE-202ENST00000415788 ZNF532Q9HCE3 1301 aa17.43■□□□□ 0.38
SGCE-202ENST00000415788 TCRBV5S4A2TA0A5A2 114 aa17.43■□□□□ 0.38
SGCE-202ENST00000415788 VEGFAP15692 232 aaPredicted RBP17.43■□□□□ 0.38
SGCE-202ENST00000415788 EPHX2P34913 555 aa17.43■□□□□ 0.38
SGCE-202ENST00000415788 KIF4BQ2VIQ3 1234 aa17.43■□□□□ 0.38
SGCE-202ENST00000415788 APPBP2Q92624 585 aa17.43■□□□□ 0.38
SGCE-202ENST00000415788 GPR75-ASB3A0A0A6YYF3 556 aa17.42■□□□□ 0.38
SGCE-202ENST00000415788 SHTN1A0MZ66 631 aa17.42■□□□□ 0.38
SGCE-202ENST00000415788 SPDYE2BA6NHP3 402 aa17.42■□□□□ 0.38
SGCE-202ENST00000415788 BAG3O95817 575 aa17.42■□□□□ 0.38
SGCE-202ENST00000415788 SPDYE6P0CI01 402 aa17.42■□□□□ 0.38
SGCE-202ENST00000415788 USP50Q70EL3 339 aaPredicted RBP17.42■□□□□ 0.38
SGCE-202ENST00000415788 PNMA8AQ86V59 439 aaPredicted RBP17.42■□□□□ 0.38
SGCE-202ENST00000415788 MYO1BO43795 1136 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms