RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 PGAP2Q9UHJ9 254 aa12.03□□□□□ -0.48
LINC01090-201ENST00000415357 JAG2Q9Y219 1238 aa12.03□□□□□ -0.48
LINC01090-201ENST00000415357 RIPOR2Q9Y4F9 1068 aa12.03□□□□□ -0.48
LINC01090-201ENST00000415357 LRRFIP2Q9Y608 721 aaKnown RBP12.03□□□□□ -0.48
LINC01090-201ENST00000415357 RFX5P48382 616 aaPredicted RBP12.02□□□□□ -0.49
LINC01090-201ENST00000415357 ZNF280AP59817 542 aaPredicted RBP12.02□□□□□ -0.49
LINC01090-201ENST00000415357 METTL24Q5JXM2 366 aa12.02□□□□□ -0.49
LINC01090-201ENST00000415357 ATF7IPQ6VMQ6 1270 aa12.02□□□□□ -0.49
LINC01090-201ENST00000415357 C15orf52Q6ZUT6 534 aaKnown RBP12.02□□□□□ -0.49
LINC01090-201ENST00000415357 ZC3H15Q8WU90 426 aaKnown RBP12.02□□□□□ -0.49
LINC01090-201ENST00000415357 ARHGAP45Q92619 1136 aa12.02□□□□□ -0.49
LINC01090-201ENST00000415357 LHX6Q9UPM6 363 aa12.02□□□□□ -0.49
LINC01090-201ENST00000415357 CNTNAP1P78357 1384 aa12.02□□□□□ -0.49
LINC01090-201ENST00000415357 ADM5C9JUS6 153 aa12.01□□□□□ -0.49
LINC01090-201ENST00000415357 USP17L8P0C7I0 530 aa12.01□□□□□ -0.49
LINC01090-201ENST00000415357 GYG1P46976 350 aa12.01□□□□□ -0.49
LINC01090-201ENST00000415357 STRIP1Q5VSL9 837 aa12.01□□□□□ -0.49
LINC01090-201ENST00000415357 CST9Q5W186 159 aa12.01□□□□□ -0.49
LINC01090-201ENST00000415357 INTS3Q68E01 1043 aaKnown RBP12.01□□□□□ -0.49
LINC01090-201ENST00000415357 TTLL5Q6EMB2 1281 aa12.01□□□□□ -0.49
LINC01090-201ENST00000415357 ZNF804AQ7Z570 1209 aa12.01□□□□□ -0.49
LINC01090-201ENST00000415357 USP48Q86UV5 1035 aa12.01□□□□□ -0.49
LINC01090-201ENST00000415357 JMYQ8N9B5 988 aa12.01□□□□□ -0.49
LINC01090-201ENST00000415357 ZNF408Q9H9D4 720 aa12.01□□□□□ -0.49
LINC01090-201ENST00000415357 MYOZ2Q9NPC6 264 aa12.01□□□□□ -0.49
LINC01090-201ENST00000415357 GGA3Q9NZ52 723 aa12.01□□□□□ -0.49
LINC01090-201ENST00000415357 MROH5Q6ZUA9 1318 aa12.01□□□□□ -0.49
LINC01090-201ENST00000415357 TRPM7Q96QT4 1865 aa12.01□□□□□ -0.49
LINC01090-201ENST00000415357 SPDYE16A6NNV3 312 aaPredicted RBP12□□□□□ -0.49
LINC01090-201ENST00000415357 IPO8O15397 1037 aaKnown RBP12□□□□□ -0.49
LINC01090-201ENST00000415357 CELF2O95319 508 aaKnown RBP12□□□□□ -0.49
LINC01090-201ENST00000415357 PTPN12Q05209 780 aaKnown RBP12□□□□□ -0.49
LINC01090-201ENST00000415357 UBE4AQ14139 1066 aa12□□□□□ -0.49
LINC01090-201ENST00000415357 CDC37L1Q7L3B6 337 aa12□□□□□ -0.49
LINC01090-201ENST00000415357 KIAA0825Q8IV33 1275 aa12□□□□□ -0.49
LINC01090-201ENST00000415357 CERS5Q8N5B7 392 aa12□□□□□ -0.49
LINC01090-201ENST00000415357 VGLL2Q8N8G2 317 aa12□□□□□ -0.49
LINC01090-201ENST00000415357 SIL1Q9H173 461 aa12□□□□□ -0.49
LINC01090-201ENST00000415357 ABT1Q9ULW3 272 aaKnown RBP12□□□□□ -0.49
LINC01090-201ENST00000415357 SCAF8Q9UPN6 1271 aaKnown RBP12□□□□□ -0.49
LINC01090-201ENST00000415357 FAM205CA6NFA0 338 aa11.99□□□□□ -0.49
LINC01090-201ENST00000415357 EYA2O00167 538 aa11.99□□□□□ -0.49
LINC01090-201ENST00000415357 SASH1O94885 1247 aa11.99□□□□□ -0.49
LINC01090-201ENST00000415357 IL1R1P14778 569 aa11.99□□□□□ -0.49
LINC01090-201ENST00000415357 VEGFBP49765 207 aa11.99□□□□□ -0.49
LINC01090-201ENST00000415357 SCARF1Q14162 830 aa11.99□□□□□ -0.49
LINC01090-201ENST00000415357 ANGEL2Q5VTE6 544 aaKnown RBP11.99□□□□□ -0.49
LINC01090-201ENST00000415357 ZKSCAN2Q63HK3 967 aa11.99□□□□□ -0.49
LINC01090-201ENST00000415357 KRT26Q7Z3Y9 468 aa11.99□□□□□ -0.49
LINC01090-201ENST00000415357 TMEM57Q8N5G2 664 aa11.99□□□□□ -0.49
LINC01090-201ENST00000415357 FAM84BQ96KN1 310 aaPredicted RBP11.99□□□□□ -0.49
LINC01090-201ENST00000415357 PA2G4Q9UQ80 394 aaKnown RBP11.99□□□□□ -0.49
LINC01090-201ENST00000415357 MYO3BQ8WXR4 1341 aa11.99□□□□□ -0.49
LINC01090-201ENST00000415357 RASSF10A6NK89 507 aa11.98□□□□□ -0.49
LINC01090-201ENST00000415357 F8W031 263 aaPredicted RBP11.98□□□□□ -0.49
LINC01090-201ENST00000415357 PDE8BO95263 885 aa11.98□□□□□ -0.49
LINC01090-201ENST00000415357 GNAI3P08754 354 aa11.98□□□□□ -0.49
LINC01090-201ENST00000415357 HIBADHP31937 336 aaKnown RBP11.98□□□□□ -0.49
LINC01090-201ENST00000415357 NBPF9Q3BBW0 867 aa11.98□□□□□ -0.49
LINC01090-201ENST00000415357 ATG9AQ7Z3C6 839 aa11.98□□□□□ -0.49
LINC01090-201ENST00000415357 DCPSQ96C86 337 aaKnown RBP11.98□□□□□ -0.49
LINC01090-201ENST00000415357 IQSEC3Q9UPP2 1182 aaPredicted RBP11.98□□□□□ -0.49
LINC01090-201ENST00000415357 RLBP1P12271 317 aa11.97□□□□□ -0.49
LINC01090-201ENST00000415357 GRM1Q13255 1194 aa11.97□□□□□ -0.49
LINC01090-201ENST00000415357 DEFB115Q30KQ5 88 aa11.97□□□□□ -0.49
LINC01090-201ENST00000415357 VARS2Q5ST30 1063 aaKnown RBP11.97□□□□□ -0.49
LINC01090-201ENST00000415357 SULF1Q8IWU6 871 aa11.97□□□□□ -0.49
LINC01090-201ENST00000415357 OGFOD1Q8N543 542 aa11.97□□□□□ -0.49
LINC01090-201ENST00000415357 TDRD7Q8NHU6 1098 aaKnown RBP11.97□□□□□ -0.49
LINC01090-201ENST00000415357 PCDHAC2Q9Y5I4 1007 aa11.97□□□□□ -0.49
LINC01090-201ENST00000415357 TLL2Q9Y6L7 1015 aa11.97□□□□□ -0.49
LINC01090-201ENST00000415357 POLR2AP24928 1970 aaKnown RBP11.97□□□□□ -0.49
LINC01090-201ENST00000415357 WNT10BO00744 389 aa11.96□□□□□ -0.49
LINC01090-201ENST00000415357 HSPA1AP0DMV8 641 aaKnown RBP11.96□□□□□ -0.49
LINC01090-201ENST00000415357 HSPA1BP0DMV9 641 aaKnown RBP11.96□□□□□ -0.49
LINC01090-201ENST00000415357 FGFR2P21802 821 aa11.96□□□□□ -0.49
LINC01090-201ENST00000415357 CHAF1AQ13111 956 aaPredicted RBP11.96□□□□□ -0.49
LINC01090-201ENST00000415357 PUM3Q15397 648 aaKnown RBP11.96□□□□□ -0.49
LINC01090-201ENST00000415357 CYP4F22Q6NT55 531 aa11.96□□□□□ -0.49
LINC01090-201ENST00000415357 FBXO33Q7Z6M2 555 aa11.96□□□□□ -0.49
LINC01090-201ENST00000415357 DDX12PQ92771 950 aa11.96□□□□□ -0.49
LINC01090-201ENST00000415357 ARAP2Q8WZ64 1704 aa11.95□□□□□ -0.5
LINC01090-201ENST00000415357 AOX1Q06278 1338 aa11.95□□□□□ -0.5
LINC01090-201ENST00000415357 FAM205AQ6ZU69 1335 aa11.95□□□□□ -0.5
LINC01090-201ENST00000415357 WDR33Q9C0J8 1336 aaKnown RBP11.95□□□□□ -0.5
LINC01090-201ENST00000415357 SEMA3EO15041 775 aa11.95□□□□□ -0.5
LINC01090-201ENST00000415357 SRGAP3O43295 1099 aa11.95□□□□□ -0.5
LINC01090-201ENST00000415357 GNAI2P04899 355 aa11.95□□□□□ -0.5
LINC01090-201ENST00000415357 BCAMP50895 628 aa11.95□□□□□ -0.5
LINC01090-201ENST00000415357 PRAMEF18Q5VWM3 479 aa11.95□□□□□ -0.5
LINC01090-201ENST00000415357 SAPCD2Q86UD0 394 aa11.95□□□□□ -0.5
LINC01090-201ENST00000415357 VPS37DQ86XT2 251 aa11.95□□□□□ -0.5
LINC01090-201ENST00000415357 FTSJ3Q8IY81 847 aaKnown RBP11.95□□□□□ -0.5
LINC01090-201ENST00000415357 DZIP1LQ8IYY4 767 aaKnown RBP11.95□□□□□ -0.5
LINC01090-201ENST00000415357 CDCA5Q96FF9 252 aa11.95□□□□□ -0.5
LINC01090-201ENST00000415357 C1orf115Q9H7X2 142 aa11.95□□□□□ -0.5
LINC01090-201ENST00000415357 HDAC9Q9UKV0 1011 aa11.95□□□□□ -0.5
LINC01090-201ENST00000415357 HDAC5Q9UQL6 1122 aa11.95□□□□□ -0.5
LINC01090-201ENST00000415357 PITPNM2Q9BZ72 1349 aa11.94□□□□□ -0.5
LINC01090-201ENST00000415357 PNMA6EA0A0J9YXQ4 647 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms