RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 TNFAIP1Q13829 316 aa20.91■□□□□ 0.94
SCAMP4-204ENST00000414057 SUPT20HL1Q3ZLR7 823 aa20.91■□□□□ 0.94
SCAMP4-204ENST00000414057 MOB2Q70IA6 237 aa20.91■□□□□ 0.94
SCAMP4-204ENST00000414057 VGLL2Q8N8G2 317 aa20.91■□□□□ 0.94
SCAMP4-204ENST00000414057 KLHDC4Q8TBB5 520 aa20.91■□□□□ 0.94
SCAMP4-204ENST00000414057 PRMT6Q96LA8 375 aaPredicted RBP20.91■□□□□ 0.94
SCAMP4-204ENST00000414057 CSRNP1Q96S65 589 aa20.91■□□□□ 0.94
SCAMP4-204ENST00000414057 PPP1R12BO60237 982 aaPredicted RBP20.9■□□□□ 0.94
SCAMP4-204ENST00000414057 VEZTQ9HBM0 779 aa20.9■□□□□ 0.94
SCAMP4-204ENST00000414057 PCDHB15Q9Y5E8 787 aa20.9■□□□□ 0.94
SCAMP4-204ENST00000414057 HDAC1Q13547 482 aaPredicted RBP20.89■□□□□ 0.94
SCAMP4-204ENST00000414057 RNF186Q9NXI6 227 aa20.89■□□□□ 0.94
SCAMP4-204ENST00000414057 CLRN2A0PK11 232 aa20.88■□□□□ 0.93
SCAMP4-204ENST00000414057 GNAI3P08754 354 aa20.88■□□□□ 0.93
SCAMP4-204ENST00000414057 SLC5A1P13866 664 aa20.88■□□□□ 0.93
SCAMP4-204ENST00000414057 RFX5P48382 616 aaPredicted RBP20.88■□□□□ 0.93
SCAMP4-204ENST00000414057 PTPN12Q05209 780 aaKnown RBP20.88■□□□□ 0.93
SCAMP4-204ENST00000414057 LPIN2Q92539 896 aa20.88■□□□□ 0.93
SCAMP4-204ENST00000414057 ANGEL1Q9UNK9 670 aaKnown RBP20.88■□□□□ 0.93
SCAMP4-204ENST00000414057 UNCXA6NJT0 531 aa20.88■□□□□ 0.93
SCAMP4-204ENST00000414057 TRPA1O75762 1119 aa20.88■□□□□ 0.93
SCAMP4-204ENST00000414057 CIAO1O76071 339 aa20.88■□□□□ 0.93
SCAMP4-204ENST00000414057 HDLBPQ00341 1268 aaKnown RBP20.88■□□□□ 0.93
SCAMP4-204ENST00000414057 CHAF1AQ13111 956 aaPredicted RBP20.88■□□□□ 0.93
SCAMP4-204ENST00000414057 ABHD8Q96I13 439 aa20.88■□□□□ 0.93
SCAMP4-204ENST00000414057 FGFR2P21802 821 aa20.87■□□□□ 0.93
SCAMP4-204ENST00000414057 PRKG1Q13976 671 aa20.87■□□□□ 0.93
SCAMP4-204ENST00000414057 CEP126Q9P2H0 1117 aa20.87■□□□□ 0.93
SCAMP4-204ENST00000414057 IQSEC3Q9UPP2 1182 aaPredicted RBP20.87■□□□□ 0.93
SCAMP4-204ENST00000414057 SUGT1Q9Y2Z0 365 aa20.87■□□□□ 0.93
SCAMP4-204ENST00000414057 PCDHAC2Q9Y5I4 1007 aa20.87■□□□□ 0.93
SCAMP4-204ENST00000414057 LRRFIP2Q9Y608 721 aaKnown RBP20.87■□□□□ 0.93
SCAMP4-204ENST00000414057 TNNI2P48788 182 aa20.86■□□□□ 0.93
SCAMP4-204ENST00000414057 BCAMP50895 628 aa20.86■□□□□ 0.93
SCAMP4-204ENST00000414057 SREBF2Q12772 1141 aa20.86■□□□□ 0.93
SCAMP4-204ENST00000414057 MAP3K11Q16584 847 aa20.86■□□□□ 0.93
SCAMP4-204ENST00000414057 SPDYE2Q495Y8 402 aa20.86■□□□□ 0.93
SCAMP4-204ENST00000414057 LDLRAD1Q5T700 205 aa20.86■□□□□ 0.93
SCAMP4-204ENST00000414057 MAST3O60307 1309 aa20.85■□□□□ 0.93
SCAMP4-204ENST00000414057 IL15P40933 162 aaPredicted RBP20.85■□□□□ 0.93
SCAMP4-204ENST00000414057 CRKP46108 304 aa20.85■□□□□ 0.93
SCAMP4-204ENST00000414057 RASA3Q14644 834 aa20.85■□□□□ 0.93
SCAMP4-204ENST00000414057 MRIQ9BWK5 157 aa20.85■□□□□ 0.93
SCAMP4-204ENST00000414057 GNL3LQ9NVN8 582 aaKnown RBP20.85■□□□□ 0.93
SCAMP4-204ENST00000414057 RPAP2Q8IXW5 612 aaPredicted RBP20.84■□□□□ 0.93
SCAMP4-204ENST00000414057 WDR66Q8TBY9 1149 aa20.84■□□□□ 0.93
SCAMP4-204ENST00000414057 TEKT1Q969V4 418 aa20.84■□□□□ 0.93
SCAMP4-204ENST00000414057 SLC10A4Q96EP9 437 aa20.84■□□□□ 0.93
SCAMP4-204ENST00000414057 SIL1Q9H173 461 aa20.84■□□□□ 0.93
SCAMP4-204ENST00000414057 ZNF70Q9UC06 446 aaPredicted RBP20.84■□□□□ 0.93
SCAMP4-204ENST00000414057 IGHDP01880 384 aa20.83■□□□□ 0.93
SCAMP4-204ENST00000414057 IREB2P48200 963 aaKnown RBP20.83■□□□□ 0.93
SCAMP4-204ENST00000414057 TM4SF4P48230 202 aa20.83■□□□□ 0.93
SCAMP4-204ENST00000414057 ATG9AQ7Z3C6 839 aa20.83■□□□□ 0.93
SCAMP4-204ENST00000414057 MEIS3Q99687 375 aa20.83■□□□□ 0.93
SCAMP4-204ENST00000414057 TDRD3Q9H7E2 651 aaKnown RBP20.83■□□□□ 0.93
SCAMP4-204ENST00000414057 DGKZQ13574 1117 aa20.82■□□□□ 0.92
SCAMP4-204ENST00000414057 ATP2B3Q16720 1220 aa20.82■□□□□ 0.92
SCAMP4-204ENST00000414057 COPRSQ9NQ92 184 aa20.82■□□□□ 0.92
SCAMP4-204ENST00000414057 GNAI2P04899 355 aa20.81■□□□□ 0.92
SCAMP4-204ENST00000414057 INHBEP58166 350 aa20.81■□□□□ 0.92
SCAMP4-204ENST00000414057 NBPF12Q5TAG4 269 aaPredicted RBP20.81■□□□□ 0.92
SCAMP4-204ENST00000414057 SPRYD7Q5W111 196 aa20.81■□□□□ 0.92
SCAMP4-204ENST00000414057 MCOLN1Q9GZU1 580 aa20.81■□□□□ 0.92
SCAMP4-204ENST00000414057 TMOD2Q9NZR1 351 aa20.81■□□□□ 0.92
SCAMP4-204ENST00000414057 ECM29Q5VYK3 1845 aa20.81■□□□□ 0.92
SCAMP4-204ENST00000414057 ZBTB48P10074 688 aaPredicted RBP20.81■□□□□ 0.92
SCAMP4-204ENST00000414057 MANSC4A6NHS7 340 aaPredicted RBP20.8■□□□□ 0.92
SCAMP4-204ENST00000414057 MKRN3Q13064 507 aaKnown RBP20.8■□□□□ 0.92
SCAMP4-204ENST00000414057 ANKRD13AQ8IZ07 590 aa20.8■□□□□ 0.92
SCAMP4-204ENST00000414057 ZDHHC15Q96MV8 337 aa20.8■□□□□ 0.92
SCAMP4-204ENST00000414057 TCP10L2B9ZVM9 353 aa20.79■□□□□ 0.92
SCAMP4-204ENST00000414057 SEMA3EO15041 775 aa20.79■□□□□ 0.92
SCAMP4-204ENST00000414057 SRGAP3O43295 1099 aa20.79■□□□□ 0.92
SCAMP4-204ENST00000414057 ALDH1A1P00352 501 aa20.79■□□□□ 0.92
SCAMP4-204ENST00000414057 FZD1Q9UP38 647 aa20.79■□□□□ 0.92
SCAMP4-204ENST00000414057 AKAP11Q9UKA4 1901 aa20.79■□□□□ 0.92
SCAMP4-204ENST00000414057 AOX1Q06278 1338 aa20.79■□□□□ 0.92
SCAMP4-204ENST00000414057 ARAP2Q8WZ64 1704 aa20.78■□□□□ 0.92
SCAMP4-204ENST00000414057 CCDC85CA6NKD9 419 aa20.78■□□□□ 0.92
SCAMP4-204ENST00000414057 HMMRO75330 724 aa20.78■□□□□ 0.92
SCAMP4-204ENST00000414057 USP2O75604 605 aaPredicted RBP20.78■□□□□ 0.92
SCAMP4-204ENST00000414057 MTX1Q13505 466 aa20.78■□□□□ 0.92
SCAMP4-204ENST00000414057 GRIK5Q16478 980 aa20.78■□□□□ 0.92
SCAMP4-204ENST00000414057 HHIPL2Q6UWX4 724 aa20.78■□□□□ 0.92
SCAMP4-204ENST00000414057 SMC5Q8IY18 1101 aa20.78■□□□□ 0.92
SCAMP4-204ENST00000414057 GCC1Q96CN9 775 aa20.78■□□□□ 0.92
SCAMP4-204ENST00000414057 C1orf115Q9H7X2 142 aa20.78■□□□□ 0.92
SCAMP4-204ENST00000414057 DENND2AQ9ULE3 1009 aa20.78■□□□□ 0.92
SCAMP4-204ENST00000414057 AKAP2Q9Y2D5 859 aa20.78■□□□□ 0.92
SCAMP4-204ENST00000414057 SSC5DA1L4H1 1573 aa20.78■□□□□ 0.92
SCAMP4-204ENST00000414057 CEP85Q6P2H3 762 aa20.77■□□□□ 0.92
SCAMP4-204ENST00000414057 HOOK2Q96ED9 719 aa20.77■□□□□ 0.92
SCAMP4-204ENST00000414057 PA2G4Q9UQ80 394 aaKnown RBP20.77■□□□□ 0.92
SCAMP4-204ENST00000414057 NOM1Q5C9Z4 860 aaKnown RBP20.76■□□□□ 0.91
SCAMP4-204ENST00000414057 FKBP1CQ5VVH2 108 aa20.76■□□□□ 0.91
SCAMP4-204ENST00000414057 FAM83AQ86UY5 434 aa20.76■□□□□ 0.91
SCAMP4-204ENST00000414057 ZGPATQ8N5A5 531 aaKnown RBP20.76■□□□□ 0.91
SCAMP4-204ENST00000414057 WNK4Q96J92 1243 aa20.76■□□□□ 0.91
SCAMP4-204ENST00000414057 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms