RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	LRP2BP	Q9P2M1	347 aa		16.01	■□□□□ 0.15
SF1-206	ENST00000413725	IGSF3	O75054	1194 aa		16	■□□□□ 0.15
SF1-206	ENST00000413725	CYP2E1	P05181	493 aa	Predicted RBP	16	■□□□□ 0.15
SF1-206	ENST00000413725	PRDX5	P30044	214 aa		16	■□□□□ 0.15
SF1-206	ENST00000413725	EPHX2	P34913	555 aa		16	■□□□□ 0.15
SF1-206	ENST00000413725	EPS15	P42566	896 aa		16	■□□□□ 0.15
SF1-206	ENST00000413725	ZNF280A	P59817	542 aa	Predicted RBP	16	■□□□□ 0.15
SF1-206	ENST00000413725	DZIP1	Q86YF9	867 aa	Known RBP	16	■□□□□ 0.15
SF1-206	ENST00000413725	PI4K2B	Q8TCG2	481 aa		16	■□□□□ 0.15
SF1-206	ENST00000413725	NMRK2	Q9NPI5	230 aa		16	■□□□□ 0.15
SF1-206	ENST00000413725	ADARB2	Q9NS39	739 aa	Known RBP	16	■□□□□ 0.15
SF1-206	ENST00000413725	PAG1	Q9NWQ8	432 aa		16	■□□□□ 0.15
SF1-206	ENST00000413725	GOLIM4	O00461	696 aa		15.99	■□□□□ 0.15
SF1-206	ENST00000413725	TBC1D9	Q6ZT07	1266 aa		15.99	■□□□□ 0.15
SF1-206	ENST00000413725	PLEKHM2	Q8IWE5	1019 aa		15.99	■□□□□ 0.15
SF1-206	ENST00000413725	SLF2	Q8IX21	1173 aa		15.99	■□□□□ 0.15
SF1-206	ENST00000413725	ZNF784	Q8NCA9	323 aa	Predicted RBP	15.99	■□□□□ 0.15
SF1-206	ENST00000413725	TAF1D	Q9H5J8	278 aa	Predicted RBP	15.99	■□□□□ 0.15
SF1-206	ENST00000413725	RAI14	Q9P0K7	980 aa		15.99	■□□□□ 0.15
SF1-206	ENST00000413725	NDUFB9	Q9Y6M9	179 aa		15.99	■□□□□ 0.15
SF1-206	ENST00000413725	CDK5RAP2	Q96SN8	1893 aa		15.99	■□□□□ 0.15
SF1-206	ENST00000413725	SHTN1	A0MZ66	631 aa		15.98	■□□□□ 0.15
SF1-206	ENST00000413725	POTEC	B2RU33	542 aa		15.98	■□□□□ 0.15
SF1-206	ENST00000413725	PDE4A	P27815	886 aa		15.98	■□□□□ 0.15
SF1-206	ENST00000413725	HDLBP	Q00341	1268 aa	Known RBP	15.98	■□□□□ 0.15
SF1-206	ENST00000413725	MAP3K12	Q12852	859 aa		15.98	■□□□□ 0.15
SF1-206	ENST00000413725	GRIK5	Q16478	980 aa		15.98	■□□□□ 0.15
SF1-206	ENST00000413725	KIF4B	Q2VIQ3	1234 aa		15.98	■□□□□ 0.15
SF1-206	ENST00000413725	USP50	Q70EL3	339 aa	Predicted RBP	15.98	■□□□□ 0.15
SF1-206	ENST00000413725	PNMA8A	Q86V59	439 aa	Predicted RBP	15.98	■□□□□ 0.15
SF1-206	ENST00000413725	TEKT1	Q969V4	418 aa		15.98	■□□□□ 0.15
SF1-206	ENST00000413725	OSBPL3	Q9H4L5	887 aa		15.98	■□□□□ 0.15
SF1-206	ENST00000413725	MYOZ2	Q9NPC6	264 aa		15.98	■□□□□ 0.15
SF1-206	ENST00000413725	PIH1D3	Q9NQM4	214 aa	Known RBP	15.98	■□□□□ 0.15
SF1-206	ENST00000413725	SERPINA10	Q9UK55	444 aa		15.98	■□□□□ 0.15
SF1-206	ENST00000413725	IDH1	O75874	414 aa	Known RBP	15.97	■□□□□ 0.15
SF1-206	ENST00000413725	RBM5	P52756	815 aa	Known RBP eCLIP	15.97	■□□□□ 0.15
SF1-206	ENST00000413725	GSTO1	P78417	241 aa		15.97	■□□□□ 0.15
SF1-206	ENST00000413725	DLGAP5	Q15398	846 aa		15.97	■□□□□ 0.15
SF1-206	ENST00000413725	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	15.97	■□□□□ 0.15
SF1-206	ENST00000413725	SAMD7	Q7Z3H4	446 aa		15.97	■□□□□ 0.15
SF1-206	ENST00000413725	MRI	Q9BWK5	157 aa		15.97	■□□□□ 0.15
SF1-206	ENST00000413725	ANTXR1	Q9H6X2	564 aa		15.97	■□□□□ 0.15
SF1-206	ENST00000413725	FOCAD	Q5VW36	1801 aa		15.96	■□□□□ 0.15
SF1-206	ENST00000413725	CRK	P46108	304 aa		15.96	■□□□□ 0.15
SF1-206	ENST00000413725	MECOM	Q03112	1051 aa		15.96	■□□□□ 0.15
SF1-206	ENST00000413725	CFAP100	Q494V2	611 aa		15.96	■□□□□ 0.15
SF1-206	ENST00000413725	EAPP	Q56P03	285 aa	Predicted RBP	15.96	■□□□□ 0.15
SF1-206	ENST00000413725	RBM26	Q5T8P6	1007 aa	Known RBP	15.96	■□□□□ 0.15
SF1-206	ENST00000413725	TMED8	Q6PL24	325 aa	Predicted RBP	15.96	■□□□□ 0.15
SF1-206	ENST00000413725	HHIPL2	Q6UWX4	724 aa		15.96	■□□□□ 0.15
SF1-206	ENST00000413725	EDC3	Q96F86	508 aa	Known RBP	15.96	■□□□□ 0.15
SF1-206	ENST00000413725	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	15.96	■□□□□ 0.15
SF1-206	ENST00000413725	LDHC	P07864	332 aa		15.95	■□□□□ 0.14
SF1-206	ENST00000413725	NAA16	Q6N069	864 aa	Predicted RBP	15.95	■□□□□ 0.14
SF1-206	ENST00000413725	MTMR14	Q8NCE2	650 aa		15.95	■□□□□ 0.14
SF1-206	ENST00000413725	TRPM4	Q8TD43	1214 aa		15.95	■□□□□ 0.14
SF1-206	ENST00000413725	NSUN4	Q96CB9	384 aa	Known RBP	15.95	■□□□□ 0.14
SF1-206	ENST00000413725	MYO1B	O43795	1136 aa		15.94	■□□□□ 0.14
SF1-206	ENST00000413725	MAP4K4	O95819	1239 aa	Predicted RBP	15.94	■□□□□ 0.14
SF1-206	ENST00000413725	DIXDC1	Q155Q3	683 aa		15.94	■□□□□ 0.14
SF1-206	ENST00000413725	LRRFIP1	Q32MZ4	808 aa	Known RBP	15.94	■□□□□ 0.14
SF1-206	ENST00000413725	ZSCAN25	Q6NSZ9	544 aa		15.94	■□□□□ 0.14
SF1-206	ENST00000413725	ZDHHC15	Q96MV8	337 aa		15.94	■□□□□ 0.14
SF1-206	ENST00000413725	NOL10	Q9BSC4	688 aa	Known RBP	15.94	■□□□□ 0.14
SF1-206	ENST00000413725	TRPM7	Q96QT4	1865 aa		15.94	■□□□□ 0.14
SF1-206	ENST00000413725	MROH7-TTC4	A0A0A0MT08	1334 aa		15.94	■□□□□ 0.14
SF1-206	ENST00000413725	SPDYE2B	A6NHP3	402 aa		15.93	■□□□□ 0.14
SF1-206	ENST00000413725	TRIM6-TRIM34	B2RNG4	842 aa		15.93	■□□□□ 0.14
SF1-206	ENST00000413725	WNT10B	O00744	389 aa		15.93	■□□□□ 0.14
SF1-206	ENST00000413725	EGFR	P00533	1210 aa		15.93	■□□□□ 0.14
SF1-206	ENST00000413725	SPDYE6	P0CI01	402 aa		15.93	■□□□□ 0.14
SF1-206	ENST00000413725	LDHD	Q86WU2	507 aa		15.93	■□□□□ 0.14
SF1-206	ENST00000413725	CNTROB	Q8N137	903 aa		15.93	■□□□□ 0.14
SF1-206	ENST00000413725	MAGEB6	Q8N7X4	407 aa		15.93	■□□□□ 0.14
SF1-206	ENST00000413725	KBTBD3	Q8NAB2	608 aa		15.93	■□□□□ 0.14
SF1-206	ENST00000413725	EVI5L	Q96CN4	794 aa		15.93	■□□□□ 0.14
SF1-206	ENST00000413725	FAM163A	Q96GL9	167 aa	Predicted RBP	15.93	■□□□□ 0.14
SF1-206	ENST00000413725	FSD1	Q9BTV5	496 aa		15.93	■□□□□ 0.14
SF1-206	ENST00000413725	CLEC11A	Q9Y240	323 aa		15.93	■□□□□ 0.14
SF1-206	ENST00000413725	DAGLA	Q9Y4D2	1042 aa		15.93	■□□□□ 0.14
SF1-206	ENST00000413725	MYH1	P12882	1939 aa		15.93	■□□□□ 0.14
SF1-206	ENST00000413725	GAK	O14976	1311 aa		15.93	■□□□□ 0.14
SF1-206	ENST00000413725	KIF3C	O14782	793 aa		15.92	■□□□□ 0.14
SF1-206	ENST00000413725	CYP7A1	P22680	504 aa		15.92	■□□□□ 0.14
SF1-206	ENST00000413725	TTC22	Q5TAA0	569 aa		15.92	■□□□□ 0.14
SF1-206	ENST00000413725	SLC9C2	Q5TAH2	1124 aa		15.92	■□□□□ 0.14
SF1-206	ENST00000413725	ZC3H15	Q8WU90	426 aa	Known RBP	15.92	■□□□□ 0.14
SF1-206	ENST00000413725	ZBED3	Q96IU2	234 aa	Predicted RBP	15.92	■□□□□ 0.14
SF1-206	ENST00000413725	ZFY	P08048	801 aa	Predicted RBP	15.91	■□□□□ 0.14
SF1-206	ENST00000413725	PDE6A	P16499	860 aa		15.91	■□□□□ 0.14
SF1-206	ENST00000413725	RGS3	P49796	1198 aa		15.91	■□□□□ 0.14
SF1-206	ENST00000413725	HIRA	P54198	1017 aa	Predicted RBP	15.91	■□□□□ 0.14
SF1-206	ENST00000413725	MAPK8IP2	Q13387	824 aa	Predicted RBP	15.91	■□□□□ 0.14
SF1-206	ENST00000413725	NBPF9	Q3BBW0	867 aa		15.91	■□□□□ 0.14
SF1-206	ENST00000413725	ZNF384	Q8TF68	577 aa		15.91	■□□□□ 0.14
SF1-206	ENST00000413725	RILPL2	Q969X0	211 aa		15.91	■□□□□ 0.14
SF1-206	ENST00000413725	PRMT6	Q96LA8	375 aa	Predicted RBP	15.91	■□□□□ 0.14
SF1-206	ENST00000413725	TMOD2	Q9NZR1	351 aa		15.91	■□□□□ 0.14
SF1-206	ENST00000413725	PCDHAC2	Q9Y5I4	1007 aa		15.91	■□□□□ 0.14

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms