RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 FAM205AQ6ZU69 1335 aa10.67□□□□□ -0.7
HERPUD2-203ENST00000413517 MYO3BQ8WXR4 1341 aa10.67□□□□□ -0.7
HERPUD2-203ENST00000413517 WNT10BO00744 389 aa10.67□□□□□ -0.7
HERPUD2-203ENST00000413517 IPO8O15397 1037 aaKnown RBP10.67□□□□□ -0.7
HERPUD2-203ENST00000413517 SASH1O94885 1247 aa10.67□□□□□ -0.7
HERPUD2-203ENST00000413517 CELF2O95319 508 aaKnown RBP10.67□□□□□ -0.7
HERPUD2-203ENST00000413517 MTX1Q13505 466 aa10.67□□□□□ -0.7
HERPUD2-203ENST00000413517 GRIK5Q16478 980 aa10.67□□□□□ -0.7
HERPUD2-203ENST00000413517 ANGEL2Q5VTE6 544 aaKnown RBP10.67□□□□□ -0.7
HERPUD2-203ENST00000413517 KRT26Q7Z3Y9 468 aa10.67□□□□□ -0.7
HERPUD2-203ENST00000413517 FBXO33Q7Z6M2 555 aa10.67□□□□□ -0.7
HERPUD2-203ENST00000413517 CRISPLD2Q9H0B8 497 aa10.67□□□□□ -0.7
HERPUD2-203ENST00000413517 IQSEC3Q9UPP2 1182 aaPredicted RBP10.67□□□□□ -0.7
HERPUD2-203ENST00000413517 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.67□□□□□ -0.7
HERPUD2-203ENST00000413517 MYO5AQ9Y4I1 1855 aaKnown RBP10.67□□□□□ -0.7
HERPUD2-203ENST00000413517 PNMA6EA0A0J9YXQ4 647 aa10.66□□□□□ -0.7
HERPUD2-203ENST00000413517 GNAI3P08754 354 aa10.66□□□□□ -0.7
HERPUD2-203ENST00000413517 HIBADHP31937 336 aaKnown RBP10.66□□□□□ -0.7
HERPUD2-203ENST00000413517 BCAMP50895 628 aa10.66□□□□□ -0.7
HERPUD2-203ENST00000413517 REM2Q8IYK8 340 aaPredicted RBP10.66□□□□□ -0.7
HERPUD2-203ENST00000413517 ZNF408Q9H9D4 720 aa10.66□□□□□ -0.7
HERPUD2-203ENST00000413517 COPRSQ9NQ92 184 aa10.66□□□□□ -0.7
HERPUD2-203ENST00000413517 TLL2Q9Y6L7 1015 aa10.66□□□□□ -0.7
HERPUD2-203ENST00000413517 MYH2Q9UKX2 1941 aa10.66□□□□□ -0.7
HERPUD2-203ENST00000413517 PAPPA2Q9BXP8 1791 aa10.65□□□□□ -0.7
HERPUD2-203ENST00000413517 OTOFQ9HC10 1997 aa10.65□□□□□ -0.7
HERPUD2-203ENST00000413517 AKAP11Q9UKA4 1901 aa10.65□□□□□ -0.7
HERPUD2-203ENST00000413517 F8W031 263 aaPredicted RBP10.65□□□□□ -0.7
HERPUD2-203ENST00000413517 APBB1O00213 710 aa10.65□□□□□ -0.7
HERPUD2-203ENST00000413517 CIAO1O76071 339 aa10.65□□□□□ -0.7
HERPUD2-203ENST00000413517 MLLT3P42568 568 aaPredicted RBP10.65□□□□□ -0.7
HERPUD2-203ENST00000413517 PUM3Q15397 648 aaKnown RBP10.65□□□□□ -0.7
HERPUD2-203ENST00000413517 CYP4F22Q6NT55 531 aa10.65□□□□□ -0.7
HERPUD2-203ENST00000413517 SAPCD2Q86UD0 394 aa10.65□□□□□ -0.7
HERPUD2-203ENST00000413517 PANK1Q8TE04 598 aa10.65□□□□□ -0.7
HERPUD2-203ENST00000413517 DCPSQ96C86 337 aaKnown RBP10.65□□□□□ -0.7
HERPUD2-203ENST00000413517 CDCA5Q96FF9 252 aa10.65□□□□□ -0.7
HERPUD2-203ENST00000413517 ABT1Q9ULW3 272 aaKnown RBP10.65□□□□□ -0.7
HERPUD2-203ENST00000413517 PITPNM2Q9BZ72 1349 aa10.64□□□□□ -0.71
HERPUD2-203ENST00000413517 SRGAP3O43295 1099 aa10.64□□□□□ -0.71
HERPUD2-203ENST00000413517 HSPA1AP0DMV8 641 aaKnown RBP10.64□□□□□ -0.71
HERPUD2-203ENST00000413517 HSPA1BP0DMV9 641 aaKnown RBP10.64□□□□□ -0.71
HERPUD2-203ENST00000413517 FKBP1AP62942 108 aaKnown RBP10.64□□□□□ -0.71
HERPUD2-203ENST00000413517 DEFB115Q30KQ5 88 aa10.64□□□□□ -0.71
HERPUD2-203ENST00000413517 PRAMEF18Q5VWM3 479 aa10.64□□□□□ -0.71
HERPUD2-203ENST00000413517 DZIP1LQ8IYY4 767 aaKnown RBP10.64□□□□□ -0.71
HERPUD2-203ENST00000413517 SSC5DA1L4H1 1573 aa10.64□□□□□ -0.71
HERPUD2-203ENST00000413517 WDR33Q9C0J8 1336 aaKnown RBP10.63□□□□□ -0.71
HERPUD2-203ENST00000413517 GNAI2P04899 355 aa10.63□□□□□ -0.71
HERPUD2-203ENST00000413517 PDIA4P13667 645 aaKnown RBP10.63□□□□□ -0.71
HERPUD2-203ENST00000413517 ADORA1P30542 326 aa10.63□□□□□ -0.71
HERPUD2-203ENST00000413517 ATP2B3Q16720 1220 aa10.63□□□□□ -0.71
HERPUD2-203ENST00000413517 MFSD14BQ5SR56 506 aa10.63□□□□□ -0.71
HERPUD2-203ENST00000413517 CHRDL2Q6WN34 429 aa10.63□□□□□ -0.71
HERPUD2-203ENST00000413517 SULF1Q8IWU6 871 aa10.63□□□□□ -0.71
HERPUD2-203ENST00000413517 OGFOD1Q8N543 542 aa10.63□□□□□ -0.71
HERPUD2-203ENST00000413517 CAPNS2Q96L46 248 aa10.63□□□□□ -0.71
HERPUD2-203ENST00000413517 ZIC5Q96T25 663 aa10.63□□□□□ -0.71
HERPUD2-203ENST00000413517 ZBTB7BO15156 539 aaPredicted RBP10.62□□□□□ -0.71
HERPUD2-203ENST00000413517 AOC2O75106 756 aa10.62□□□□□ -0.71
HERPUD2-203ENST00000413517 IFIT1P09914 478 aaKnown RBP10.62□□□□□ -0.71
HERPUD2-203ENST00000413517 IL15P40933 162 aaPredicted RBP10.62□□□□□ -0.71
HERPUD2-203ENST00000413517 PHKA1P46020 1223 aa10.62□□□□□ -0.71
HERPUD2-203ENST00000413517 CHAF1AQ13111 956 aaPredicted RBP10.62□□□□□ -0.71
HERPUD2-203ENST00000413517 CFAP100Q494V2 611 aa10.62□□□□□ -0.71
HERPUD2-203ENST00000413517 MOB2Q70IA6 237 aa10.62□□□□□ -0.71
HERPUD2-203ENST00000413517 ITPRIPQ8IWB1 547 aa10.62□□□□□ -0.71
HERPUD2-203ENST00000413517 MTMR14Q8NCE2 650 aa10.62□□□□□ -0.71
HERPUD2-203ENST00000413517 LPIN2Q92539 896 aa10.62□□□□□ -0.71
HERPUD2-203ENST00000413517 PRMT6Q96LA8 375 aaPredicted RBP10.62□□□□□ -0.71
HERPUD2-203ENST00000413517 FAM117AQ9C073 453 aa10.62□□□□□ -0.71
HERPUD2-203ENST00000413517 GBA2Q9HCG7 927 aaPredicted RBP10.62□□□□□ -0.71
HERPUD2-203ENST00000413517 CEP126Q9P2H0 1117 aa10.62□□□□□ -0.71
HERPUD2-203ENST00000413517 LAMB1P07942 1786 aa10.62□□□□□ -0.71
HERPUD2-203ENST00000413517 CASP8AP2Q9UKL3 1982 aa10.61□□□□□ -0.71
HERPUD2-203ENST00000413517 AK9Q5TCS8 1911 aa10.61□□□□□ -0.71
HERPUD2-203ENST00000413517 CLRN2A0PK11 232 aa10.61□□□□□ -0.71
HERPUD2-203ENST00000413517 FOXN1O15353 648 aa10.61□□□□□ -0.71
HERPUD2-203ENST00000413517 SLC5A1P13866 664 aa10.61□□□□□ -0.71
HERPUD2-203ENST00000413517 HUNKP57058 714 aa10.61□□□□□ -0.71
HERPUD2-203ENST00000413517 TFCP2Q12800 502 aa10.61□□□□□ -0.71
HERPUD2-203ENST00000413517 GRM1Q13255 1194 aa10.61□□□□□ -0.71
HERPUD2-203ENST00000413517 DLGAP5Q15398 846 aa10.61□□□□□ -0.71
HERPUD2-203ENST00000413517 FTSJ3Q8IY81 847 aaKnown RBP10.61□□□□□ -0.71
HERPUD2-203ENST00000413517 HDAC9Q9UKV0 1011 aa10.61□□□□□ -0.71
HERPUD2-203ENST00000413517 TTF2Q9UNY4 1162 aaKnown RBP10.61□□□□□ -0.71
HERPUD2-203ENST00000413517 HDAC5Q9UQL6 1122 aa10.61□□□□□ -0.71
HERPUD2-203ENST00000413517 CDK5RAP2Q96SN8 1893 aa10.6□□□□□ -0.71
HERPUD2-203ENST00000413517 FAM155AB1AL88 458 aaPredicted RBP10.6□□□□□ -0.71
HERPUD2-203ENST00000413517 MMP14P50281 582 aa10.6□□□□□ -0.71
HERPUD2-203ENST00000413517 TIMM10P62072 90 aa10.6□□□□□ -0.71
HERPUD2-203ENST00000413517 CAVIN4Q5BKX8 364 aa10.6□□□□□ -0.71
HERPUD2-203ENST00000413517 VPS37DQ86XT2 251 aa10.6□□□□□ -0.71
HERPUD2-203ENST00000413517 SSH3Q8TE77 659 aa10.6□□□□□ -0.71
HERPUD2-203ENST00000413517 DDRGK1Q96HY6 314 aa10.6□□□□□ -0.71
HERPUD2-203ENST00000413517 HHIPL1Q96JK4 782 aa10.6□□□□□ -0.71
HERPUD2-203ENST00000413517 WBP1LQ9NX94 342 aa10.6□□□□□ -0.71
HERPUD2-203ENST00000413517 RCAN3Q9UKA8 241 aa10.6□□□□□ -0.71
HERPUD2-203ENST00000413517 FZD1Q9UP38 647 aa10.6□□□□□ -0.71
HERPUD2-203ENST00000413517 A0A1B0GUL7 405 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms