RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 GAS6Q14393 721 aa7.15□□□□□ -1.26
HMGB3P31-201ENST00000413333 BMS1Q14692 1282 aaKnown RBP7.15□□□□□ -1.26
HMGB3P31-201ENST00000413333 CCDC81Q6ZN84 652 aa7.15□□□□□ -1.26
HMGB3P31-201ENST00000413333 NOP9Q86U38 636 aaKnown RBP7.15□□□□□ -1.26
HMGB3P31-201ENST00000413333 SULF2Q8IWU5 870 aa7.15□□□□□ -1.26
HMGB3P31-201ENST00000413333 GRIN3AQ8TCU5 1115 aa7.15□□□□□ -1.26
HMGB3P31-201ENST00000413333 STK35Q8TDR2 534 aa7.15□□□□□ -1.26
HMGB3P31-201ENST00000413333 ANAPC16Q96DE5 110 aa7.15□□□□□ -1.26
HMGB3P31-201ENST00000413333 ADAM19Q9H013 955 aa7.15□□□□□ -1.26
HMGB3P31-201ENST00000413333 NSFL1CQ9UNZ2 370 aaKnown RBP7.15□□□□□ -1.26
HMGB3P31-201ENST00000413333 ADARB2-AS1A8MUL3 147 aa7.14□□□□□ -1.27
HMGB3P31-201ENST00000413333 RGS9O75916 674 aaPredicted RBP7.14□□□□□ -1.27
HMGB3P31-201ENST00000413333 ESRRAP11474 423 aaPredicted RBP7.14□□□□□ -1.27
HMGB3P31-201ENST00000413333 SOX9P48436 509 aa7.14□□□□□ -1.27
HMGB3P31-201ENST00000413333 LRRC14Q15048 493 aa7.14□□□□□ -1.27
HMGB3P31-201ENST00000413333 FBXW10Q5XX13 1052 aa7.14□□□□□ -1.27
HMGB3P31-201ENST00000413333 LLGL2Q6P1M3 1020 aa7.14□□□□□ -1.27
HMGB3P31-201ENST00000413333 ANKS3Q6ZW76 656 aa7.14□□□□□ -1.27
HMGB3P31-201ENST00000413333 FCHSD1Q86WN1 690 aa7.14□□□□□ -1.27
HMGB3P31-201ENST00000413333 GATAD2BQ8WXI9 593 aa7.14□□□□□ -1.27
HMGB3P31-201ENST00000413333 SRRTQ9BXP5 876 aaKnown RBP7.14□□□□□ -1.27
HMGB3P31-201ENST00000413333 EMILIN2Q9BXX0 1053 aa7.14□□□□□ -1.27
HMGB3P31-201ENST00000413333 FRRS1LQ9P0K9 344 aa7.14□□□□□ -1.27
HMGB3P31-201ENST00000413333 GGA1Q9UJY5 639 aa7.14□□□□□ -1.27
HMGB3P31-201ENST00000413333 STRIP2Q9ULQ0 834 aa7.14□□□□□ -1.27
HMGB3P31-201ENST00000413333 CYP8B1Q9UNU6 501 aa7.14□□□□□ -1.27
HMGB3P31-201ENST00000413333 ELOA3CA0A087WX78 387 aaPredicted RBP7.13□□□□□ -1.27
HMGB3P31-201ENST00000413333 ELOA3DA6NLF2 546 aaPredicted RBP7.13□□□□□ -1.27
HMGB3P31-201ENST00000413333 EPHA1P21709 976 aa7.13□□□□□ -1.27
HMGB3P31-201ENST00000413333 ALAS2P22557 587 aa7.13□□□□□ -1.27
HMGB3P31-201ENST00000413333 ARNTP27540 789 aa7.13□□□□□ -1.27
HMGB3P31-201ENST00000413333 MAP2K3P46734 347 aa7.13□□□□□ -1.27
HMGB3P31-201ENST00000413333 ELOA3BQ3SY89 546 aa7.13□□□□□ -1.27
HMGB3P31-201ENST00000413333 DIEXFQ68CQ4 756 aaKnown RBP7.13□□□□□ -1.27
HMGB3P31-201ENST00000413333 SLITRK4Q8IW52 837 aa7.13□□□□□ -1.27
HMGB3P31-201ENST00000413333 GPR161Q8N6U8 529 aaKnown RBP7.13□□□□□ -1.27
HMGB3P31-201ENST00000413333 ELOA3Q8NG57 546 aa7.13□□□□□ -1.27
HMGB3P31-201ENST00000413333 DDX54Q8TDD1 881 aaKnown RBP7.13□□□□□ -1.27
HMGB3P31-201ENST00000413333 SLC7A3Q8WY07 619 aa7.13□□□□□ -1.27
HMGB3P31-201ENST00000413333 MBIPQ9NS73 344 aa7.13□□□□□ -1.27
HMGB3P31-201ENST00000413333 PPT2Q9UMR5 302 aa7.13□□□□□ -1.27
HMGB3P31-201ENST00000413333 R3HCC1Q9Y3T6 440 aaKnown RBP7.13□□□□□ -1.27
HMGB3P31-201ENST00000413333 ROBO2Q9HCK4 1378 aa7.12□□□□□ -1.27
HMGB3P31-201ENST00000413333 CADPSQ9ULU8 1353 aa7.12□□□□□ -1.27
HMGB3P31-201ENST00000413333 SOX1O00570 391 aaPredicted RBP7.12□□□□□ -1.27
HMGB3P31-201ENST00000413333 BPNT1O95861 308 aa7.12□□□□□ -1.27
HMGB3P31-201ENST00000413333 MPP2Q14168 576 aa7.12□□□□□ -1.27
HMGB3P31-201ENST00000413333 CWF19L2Q2TBE0 894 aaKnown RBP7.12□□□□□ -1.27
HMGB3P31-201ENST00000413333 TXNDC11Q6PKC3 985 aa7.12□□□□□ -1.27
HMGB3P31-201ENST00000413333 CCDC84Q86UT8 332 aaPredicted RBP7.12□□□□□ -1.27
HMGB3P31-201ENST00000413333 HNRNPLLQ8WVV9 542 aaKnown RBP7.12□□□□□ -1.27
HMGB3P31-201ENST00000413333 KCNB2Q92953 911 aa7.12□□□□□ -1.27
HMGB3P31-201ENST00000413333 TRIM55Q9BYV6 548 aa7.12□□□□□ -1.27
HMGB3P31-201ENST00000413333 ZC3H12CQ9C0D7 883 aaKnown RBP7.12□□□□□ -1.27
HMGB3P31-201ENST00000413333 TMA7Q9Y2S6 64 aaKnown RBP7.12□□□□□ -1.27
HMGB3P31-201ENST00000413333 IGF1RP08069 1367 aa7.11□□□□□ -1.27
HMGB3P31-201ENST00000413333 FAM221AA4D161 298 aa7.11□□□□□ -1.27
HMGB3P31-201ENST00000413333 CANXP27824 592 aaKnown RBP7.11□□□□□ -1.27
HMGB3P31-201ENST00000413333 GSTM4Q03013 218 aa7.11□□□□□ -1.27
HMGB3P31-201ENST00000413333 MAP1SQ66K74 1059 aaPredicted RBP7.11□□□□□ -1.27
HMGB3P31-201ENST00000413333 HGSNATQ68CP4 663 aa7.11□□□□□ -1.27
HMGB3P31-201ENST00000413333 MPRIPQ6WCQ1 1025 aa7.11□□□□□ -1.27
HMGB3P31-201ENST00000413333 GK5Q6ZS86 529 aa7.11□□□□□ -1.27
HMGB3P31-201ENST00000413333 IL22RA1Q8N6P7 574 aa7.11□□□□□ -1.27
HMGB3P31-201ENST00000413333 FERD3LQ96RJ6 166 aa7.11□□□□□ -1.27
HMGB3P31-201ENST00000413333 JPH1Q9HDC5 661 aaPredicted RBP7.11□□□□□ -1.27
HMGB3P31-201ENST00000413333 NXF1Q9UBU9 619 aaKnown RBP7.11□□□□□ -1.27
HMGB3P31-201ENST00000413333 TLDC2A0PJX2 215 aa7.1□□□□□ -1.27
HMGB3P31-201ENST00000413333 H3BRJ5 948 aa7.1□□□□□ -1.27
HMGB3P31-201ENST00000413333 K7ELQ4 463 aaPredicted RBP7.1□□□□□ -1.27
HMGB3P31-201ENST00000413333 U2SURPO15042 1029 aaKnown RBP7.1□□□□□ -1.27
HMGB3P31-201ENST00000413333 ZNF165P49910 485 aa7.1□□□□□ -1.27
HMGB3P31-201ENST00000413333 EIF6P56537 245 aaKnown RBP7.1□□□□□ -1.27
HMGB3P31-201ENST00000413333 PTPN11Q06124 597 aaPredicted RBP7.1□□□□□ -1.27
HMGB3P31-201ENST00000413333 NFE2L2Q16236 605 aa7.1□□□□□ -1.27
HMGB3P31-201ENST00000413333 TTC9Q92623 222 aa7.1□□□□□ -1.27
HMGB3P31-201ENST00000413333 MRFAP1L1Q96HT8 127 aa7.1□□□□□ -1.27
HMGB3P31-201ENST00000413333 PUS7Q96PZ0 661 aaKnown RBP7.1□□□□□ -1.27
HMGB3P31-201ENST00000413333 CRBNQ96SW2 442 aa7.1□□□□□ -1.27
HMGB3P31-201ENST00000413333 BRMS1Q9HCU9 246 aa7.1□□□□□ -1.27
HMGB3P31-201ENST00000413333 CDK11AQ9UQ88 783 aaPredicted RBP7.1□□□□□ -1.27
HMGB3P31-201ENST00000413333 LINC01387J3KSC0 135 aa7.09□□□□□ -1.27
HMGB3P31-201ENST00000413333 SMAD7O15105 426 aaKnown RBP7.09□□□□□ -1.27
HMGB3P31-201ENST00000413333 CILPO75339 1184 aa7.09□□□□□ -1.27
HMGB3P31-201ENST00000413333 ARL4DP49703 201 aa7.09□□□□□ -1.27
HMGB3P31-201ENST00000413333 NBPF6Q5VWK0 638 aa7.09□□□□□ -1.27
HMGB3P31-201ENST00000413333 FAM117BQ6P1L5 589 aa7.09□□□□□ -1.27
HMGB3P31-201ENST00000413333 REC114Q7Z4M0 266 aa7.09□□□□□ -1.27
HMGB3P31-201ENST00000413333 GOLGA6L1Q8N7Z2 621 aa7.09□□□□□ -1.27
HMGB3P31-201ENST00000413333 GAL3ST3Q96A11 431 aa7.09□□□□□ -1.27
HMGB3P31-201ENST00000413333 SHDQ96IW2 340 aa7.09□□□□□ -1.27
HMGB3P31-201ENST00000413333 NBPF4Q96M43 638 aa7.09□□□□□ -1.27
HMGB3P31-201ENST00000413333 MDFIQ99750 246 aa7.09□□□□□ -1.27
HMGB3P31-201ENST00000413333 COL25A1Q9BXS0 654 aaPredicted RBP7.09□□□□□ -1.27
HMGB3P31-201ENST00000413333 LRRC3Q9BY71 257 aa7.09□□□□□ -1.27
HMGB3P31-201ENST00000413333 PRKAG3Q9UGI9 489 aa7.09□□□□□ -1.27
HMGB3P31-201ENST00000413333 LCE2BO14633 110 aa7.08□□□□□ -1.28
HMGB3P31-201ENST00000413333 GSTP1P09211 210 aaKnown RBP7.08□□□□□ -1.28
HMGB3P31-201ENST00000413333 CLCQ05315 142 aa7.08□□□□□ -1.28
HMGB3P31-201ENST00000413333 ZNF252P-AS1Q0IIN9 211 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms