RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 SPDYE2Q495Y8 402 aa12.64□□□□□ -0.39
LINC01643-201ENST00000412218 ARMC9Q7Z3E5 817 aa12.64□□□□□ -0.39
LINC01643-201ENST00000412218 FRAT1Q92837 279 aaPredicted RBP12.64□□□□□ -0.39
LINC01643-201ENST00000412218 CSRNP1Q96S65 589 aa12.64□□□□□ -0.39
LINC01643-201ENST00000412218 VEZTQ9HBM0 779 aa12.64□□□□□ -0.39
LINC01643-201ENST00000412218 COPRSQ9NQ92 184 aa12.64□□□□□ -0.39
LINC01643-201ENST00000412218 PA2G4Q9UQ80 394 aaKnown RBP12.64□□□□□ -0.39
LINC01643-201ENST00000412218 IL15P40933 162 aaPredicted RBP12.63□□□□□ -0.39
LINC01643-201ENST00000412218 MTX1Q13505 466 aa12.63□□□□□ -0.39
LINC01643-201ENST00000412218 PRKG1Q13976 671 aa12.63□□□□□ -0.39
LINC01643-201ENST00000412218 ATP2B3Q16720 1220 aa12.63□□□□□ -0.39
LINC01643-201ENST00000412218 LDLRAD1Q5T700 205 aa12.63□□□□□ -0.39
LINC01643-201ENST00000412218 REM2Q8IYK8 340 aaPredicted RBP12.63□□□□□ -0.39
LINC01643-201ENST00000412218 DZIP1LQ8IYY4 767 aaKnown RBP12.63□□□□□ -0.39
LINC01643-201ENST00000412218 CEP126Q9P2H0 1117 aa12.63□□□□□ -0.39
LINC01643-201ENST00000412218 ZNF70Q9UC06 446 aaPredicted RBP12.63□□□□□ -0.39
LINC01643-201ENST00000412218 SRGAP3O43295 1099 aa12.62□□□□□ -0.39
LINC01643-201ENST00000412218 HDLBPQ00341 1268 aaKnown RBP12.62□□□□□ -0.39
LINC01643-201ENST00000412218 TNFAIP1Q13829 316 aa12.62□□□□□ -0.39
LINC01643-201ENST00000412218 RASA3Q14644 834 aa12.62□□□□□ -0.39
LINC01643-201ENST00000412218 MAP3K11Q16584 847 aa12.62□□□□□ -0.39
LINC01643-201ENST00000412218 CLUAP1Q96AJ1 413 aa12.62□□□□□ -0.39
LINC01643-201ENST00000412218 TDRD3Q9H7E2 651 aaKnown RBP12.62□□□□□ -0.39
LINC01643-201ENST00000412218 RNF186Q9NXI6 227 aa12.62□□□□□ -0.39
LINC01643-201ENST00000412218 ANGEL1Q9UNK9 670 aaKnown RBP12.62□□□□□ -0.39
LINC01643-201ENST00000412218 FZD1Q9UP38 647 aa12.62□□□□□ -0.39
LINC01643-201ENST00000412218 SUGT1Q9Y2Z0 365 aa12.62□□□□□ -0.39
LINC01643-201ENST00000412218 SUPT20HL1Q3ZLR7 823 aa12.61□□□□□ -0.39
LINC01643-201ENST00000412218 NBPF12Q5TAG4 269 aaPredicted RBP12.61□□□□□ -0.39
LINC01643-201ENST00000412218 ZKSCAN2Q63HK3 967 aa12.61□□□□□ -0.39
LINC01643-201ENST00000412218 TMEM57Q8N5G2 664 aa12.61□□□□□ -0.39
LINC01643-201ENST00000412218 TEKT1Q969V4 418 aa12.61□□□□□ -0.39
LINC01643-201ENST00000412218 ZDHHC15Q96MV8 337 aa12.61□□□□□ -0.39
LINC01643-201ENST00000412218 MAST3O60307 1309 aa12.61□□□□□ -0.39
LINC01643-201ENST00000412218 ZBTB22O15209 634 aa12.6□□□□□ -0.39
LINC01643-201ENST00000412218 PPP1R12BO60237 982 aaPredicted RBP12.6□□□□□ -0.39
LINC01643-201ENST00000412218 TRPA1O75762 1119 aa12.6□□□□□ -0.39
LINC01643-201ENST00000412218 GNAI2P04899 355 aa12.6□□□□□ -0.39
LINC01643-201ENST00000412218 WDR66Q8TBY9 1149 aa12.6□□□□□ -0.39
LINC01643-201ENST00000412218 TEPSINQ96N21 525 aa12.6□□□□□ -0.39
LINC01643-201ENST00000412218 MRIQ9BWK5 157 aa12.6□□□□□ -0.39
LINC01643-201ENST00000412218 UNCXA6NJT0 531 aa12.59□□□□□ -0.39
LINC01643-201ENST00000412218 TCP10L2B9ZVM9 353 aa12.59□□□□□ -0.39
LINC01643-201ENST00000412218 ADORA1P30542 326 aa12.59□□□□□ -0.39
LINC01643-201ENST00000412218 PHKA1P46020 1223 aa12.59□□□□□ -0.39
LINC01643-201ENST00000412218 MKRN3Q13064 507 aaKnown RBP12.59□□□□□ -0.39
LINC01643-201ENST00000412218 SPRYD7Q5W111 196 aa12.59□□□□□ -0.39
LINC01643-201ENST00000412218 CDAN1Q8IWY9 1227 aa12.59□□□□□ -0.39
LINC01643-201ENST00000412218 ABHD8Q96I13 439 aa12.59□□□□□ -0.39
LINC01643-201ENST00000412218 GNL3LQ9NVN8 582 aaKnown RBP12.59□□□□□ -0.39
LINC01643-201ENST00000412218 SALL1Q9NSC2 1324 aa12.59□□□□□ -0.39
LINC01643-201ENST00000412218 PNMA6EA0A0J9YXQ4 647 aa12.58□□□□□ -0.4
LINC01643-201ENST00000412218 SEMA3EO15041 775 aa12.58□□□□□ -0.4
LINC01643-201ENST00000412218 USP2O75604 605 aaPredicted RBP12.58□□□□□ -0.4
LINC01643-201ENST00000412218 IREB2P48200 963 aaKnown RBP12.58□□□□□ -0.4
LINC01643-201ENST00000412218 TM4SF4P48230 202 aa12.58□□□□□ -0.4
LINC01643-201ENST00000412218 TNNI2P48788 182 aa12.58□□□□□ -0.4
LINC01643-201ENST00000412218 CACNB3P54284 484 aa12.58□□□□□ -0.4
LINC01643-201ENST00000412218 SREBF2Q12772 1141 aa12.58□□□□□ -0.4
LINC01643-201ENST00000412218 TFCP2Q12800 502 aa12.58□□□□□ -0.4
LINC01643-201ENST00000412218 APOBEC3HQ6NTF7 200 aaKnown RBP12.58□□□□□ -0.4
LINC01643-201ENST00000412218 HHIPL2Q6UWX4 724 aa12.58□□□□□ -0.4
LINC01643-201ENST00000412218 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.58□□□□□ -0.4
LINC01643-201ENST00000412218 CLMNQ96JQ2 1002 aa12.58□□□□□ -0.4
LINC01643-201ENST00000412218 TMEM39BQ9GZU3 492 aa12.58□□□□□ -0.4
LINC01643-201ENST00000412218 DENND2AQ9ULE3 1009 aa12.58□□□□□ -0.4
LINC01643-201ENST00000412218 A0A1B0GUL7 405 aa12.57□□□□□ -0.4
LINC01643-201ENST00000412218 ZBTB48P10074 688 aaPredicted RBP12.57□□□□□ -0.4
LINC01643-201ENST00000412218 PRDX5P30044 214 aa12.57□□□□□ -0.4
LINC01643-201ENST00000412218 CCDC102BQ68D86 513 aa12.57□□□□□ -0.4
LINC01643-201ENST00000412218 SLC10A4Q96EP9 437 aa12.57□□□□□ -0.4
LINC01643-201ENST00000412218 WNK4Q96J92 1243 aa12.57□□□□□ -0.4
LINC01643-201ENST00000412218 MCOLN1Q9GZU1 580 aa12.57□□□□□ -0.4
LINC01643-201ENST00000412218 TMOD2Q9NZR1 351 aa12.57□□□□□ -0.4
LINC01643-201ENST00000412218 AKAP2Q9Y2D5 859 aa12.57□□□□□ -0.4
LINC01643-201ENST00000412218 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.57□□□□□ -0.4
LINC01643-201ENST00000412218 PDS5AQ29RF7 1337 aaKnown RBP12.57□□□□□ -0.4
LINC01643-201ENST00000412218 RPAP1Q9BWH6 1393 aaPredicted RBP12.56□□□□□ -0.4
LINC01643-201ENST00000412218 RLBP1P12271 317 aa12.56□□□□□ -0.4
LINC01643-201ENST00000412218 TIMM10P62072 90 aa12.56□□□□□ -0.4
LINC01643-201ENST00000412218 RASGRF1Q13972 1273 aa12.56□□□□□ -0.4
LINC01643-201ENST00000412218 FKBP1CQ5VVH2 108 aa12.56□□□□□ -0.4
LINC01643-201ENST00000412218 FAM83AQ86UY5 434 aa12.56□□□□□ -0.4
LINC01643-201ENST00000412218 FTSJ3Q8IY81 847 aaKnown RBP12.56□□□□□ -0.4
LINC01643-201ENST00000412218 ANKRD13AQ8IZ07 590 aa12.56□□□□□ -0.4
LINC01643-201ENST00000412218 DAGLAQ9Y4D2 1042 aa12.56□□□□□ -0.4
LINC01643-201ENST00000412218 OTOFQ9HC10 1997 aa12.56□□□□□ -0.4
LINC01643-201ENST00000412218 LAMB1P07942 1786 aa12.56□□□□□ -0.4
LINC01643-201ENST00000412218 MYH13Q9UKX3 1938 aa12.55□□□□□ -0.4
LINC01643-201ENST00000412218 MANSC4A6NHS7 340 aaPredicted RBP12.55□□□□□ -0.4
LINC01643-201ENST00000412218 LDHBP07195 334 aaKnown RBP12.55□□□□□ -0.4
LINC01643-201ENST00000412218 GJA5P36382 358 aa12.55□□□□□ -0.4
LINC01643-201ENST00000412218 DGKZQ13574 1117 aa12.55□□□□□ -0.4
LINC01643-201ENST00000412218 POLA2Q14181 598 aa12.55□□□□□ -0.4
LINC01643-201ENST00000412218 MVPQ14764 893 aaKnown RBP12.55□□□□□ -0.4
LINC01643-201ENST00000412218 DIXDC1Q155Q3 683 aa12.55□□□□□ -0.4
LINC01643-201ENST00000412218 XAGE2Q96GT9 111 aa12.55□□□□□ -0.4
LINC01643-201ENST00000412218 CFHR5Q9BXR6 569 aa12.55□□□□□ -0.4
LINC01643-201ENST00000412218 TBC1D8O95759 1140 aa12.54□□□□□ -0.4
LINC01643-201ENST00000412218 B4GALNT3Q6L9W6 998 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms