RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 DPF2Q92785 391 aa22.51■■□□□ 1.19
CDC42-204ENST00000411827 EDC3Q96F86 508 aaKnown RBP22.51■■□□□ 1.19
CDC42-204ENST00000411827 FAM163AQ96GL9 167 aaPredicted RBP22.51■■□□□ 1.19
CDC42-204ENST00000411827 HDAC9Q9UKV0 1011 aa22.51■■□□□ 1.19
CDC42-204ENST00000411827 NDUFB9Q9Y6M9 179 aa22.51■■□□□ 1.19
CDC42-204ENST00000411827 PSME4Q14997 1843 aa22.5■■□□□ 1.19
CDC42-204ENST00000411827 SBF1O95248 1867 aa22.5■■□□□ 1.19
CDC42-204ENST00000411827 PSMD14O00487 310 aa22.5■■□□□ 1.19
CDC42-204ENST00000411827 ADD2P35612 726 aa22.5■■□□□ 1.19
CDC42-204ENST00000411827 NAA16Q6N069 864 aaPredicted RBP22.5■■□□□ 1.19
CDC42-204ENST00000411827 DPY19L2Q6NUT2 758 aa22.5■■□□□ 1.19
CDC42-204ENST00000411827 HELLSQ9NRZ9 838 aa22.5■■□□□ 1.19
CDC42-204ENST00000411827 RAD50Q92878 1312 aa22.5■■□□□ 1.19
CDC42-204ENST00000411827 COL4A5P29400 1685 aa22.49■■□□□ 1.19
CDC42-204ENST00000411827 PDE6AP16499 860 aa22.49■■□□□ 1.19
CDC42-204ENST00000411827 CHMLP26374 656 aa22.49■■□□□ 1.19
CDC42-204ENST00000411827 PRDX5P30044 214 aa22.49■■□□□ 1.19
CDC42-204ENST00000411827 MECOMQ03112 1051 aa22.49■■□□□ 1.19
CDC42-204ENST00000411827 HHIPL2Q6UWX4 724 aa22.49■■□□□ 1.19
CDC42-204ENST00000411827 ZNF784Q8NCA9 323 aaPredicted RBP22.49■■□□□ 1.19
CDC42-204ENST00000411827 APPBP2Q92624 585 aa22.49■■□□□ 1.19
CDC42-204ENST00000411827 NSUN4Q96CB9 384 aaKnown RBP22.49■■□□□ 1.19
CDC42-204ENST00000411827 GMLQ99445 158 aa22.49■■□□□ 1.19
CDC42-204ENST00000411827 KCNQ5Q9NR82 932 aa22.49■■□□□ 1.19
CDC42-204ENST00000411827 CERS5Q8N5B7 392 aa22.48■■□□□ 1.19
CDC42-204ENST00000411827 NOL10Q9BSC4 688 aaKnown RBP22.48■■□□□ 1.19
CDC42-204ENST00000411827 SERPINA10Q9UK55 444 aa22.48■■□□□ 1.19
CDC42-204ENST00000411827 DOCK2Q92608 1830 aa22.47■■□□□ 1.19
CDC42-204ENST00000411827 BAG3O95817 575 aa22.47■■□□□ 1.19
CDC42-204ENST00000411827 ZMYM1Q5SVZ6 1142 aa22.47■■□□□ 1.19
CDC42-204ENST00000411827 MAGEB6Q8N7X4 407 aa22.47■■□□□ 1.19
CDC42-204ENST00000411827 TTF2Q9UNY4 1162 aaKnown RBP22.47■■□□□ 1.19
CDC42-204ENST00000411827 JAG2Q9Y219 1238 aa22.47■■□□□ 1.19
CDC42-204ENST00000411827 AK9Q5TCS8 1911 aa22.47■■□□□ 1.19
CDC42-204ENST00000411827 SCN9AQ15858 1988 aa22.47■■□□□ 1.19
CDC42-204ENST00000411827 CCDC88AQ3V6T2 1871 aa22.46■■□□□ 1.19
CDC42-204ENST00000411827 USP17L8P0C7I0 530 aa22.46■■□□□ 1.19
CDC42-204ENST00000411827 PLCG2P16885 1265 aa22.46■■□□□ 1.19
CDC42-204ENST00000411827 CYP7A1P22680 504 aa22.46■■□□□ 1.19
CDC42-204ENST00000411827 TEKT1Q969V4 418 aa22.46■■□□□ 1.19
CDC42-204ENST00000411827 ZNF532Q9HCE3 1301 aa22.46■■□□□ 1.19
CDC42-204ENST00000411827 TCRBV5S4A2TA0A5A2 114 aa22.45■■□□□ 1.18
CDC42-204ENST00000411827 MCMDC2Q4G0Z9 681 aa22.45■■□□□ 1.18
CDC42-204ENST00000411827 GAKO14976 1311 aa22.44■■□□□ 1.18
CDC42-204ENST00000411827 EPB41L2O43491 1005 aaKnown RBP22.44■■□□□ 1.18
CDC42-204ENST00000411827 PPP4CP60510 307 aa22.44■■□□□ 1.18
CDC42-204ENST00000411827 KIAA0825Q8IV33 1275 aa22.44■■□□□ 1.18
CDC42-204ENST00000411827 MAST2Q6P0Q8 1798 aa22.43■■□□□ 1.18
CDC42-204ENST00000411827 MROH7-TTC4A0A0A0MT08 1334 aa22.43■■□□□ 1.18
CDC42-204ENST00000411827 GNAT2P19087 354 aa22.43■■□□□ 1.18
CDC42-204ENST00000411827 ZNF280AP59817 542 aaPredicted RBP22.43■■□□□ 1.18
CDC42-204ENST00000411827 CWC27Q6UX04 472 aaKnown RBP22.43■■□□□ 1.18
CDC42-204ENST00000411827 MTMR14Q8NCE2 650 aa22.43■■□□□ 1.18
CDC42-204ENST00000411827 ZDHHC15Q96MV8 337 aa22.43■■□□□ 1.18
CDC42-204ENST00000411827 GJA3Q9Y6H8 435 aa22.43■■□□□ 1.18
CDC42-204ENST00000411827 RPAP1Q9BWH6 1393 aaPredicted RBP22.42■■□□□ 1.18
CDC42-204ENST00000411827 ZNF541Q9H0D2 1346 aa22.42■■□□□ 1.18
CDC42-204ENST00000411827 GPR75-ASB3A0A0A6YYF3 556 aa22.42■■□□□ 1.18
CDC42-204ENST00000411827 REC8O95072 547 aa22.42■■□□□ 1.18
CDC42-204ENST00000411827 NMIQ13287 307 aaPredicted RBP22.42■■□□□ 1.18
CDC42-204ENST00000411827 AIDAQ96BJ3 306 aa22.42■■□□□ 1.18
CDC42-204ENST00000411827 MYH7P12883 1935 aa22.41■■□□□ 1.18
CDC42-204ENST00000411827 MAGEB6P1A0A0J9YX57 407 aa22.41■■□□□ 1.18
CDC42-204ENST00000411827 GLTPD2A6NH11 291 aa22.41■■□□□ 1.18
CDC42-204ENST00000411827 H7C1D1 291 aa22.41■■□□□ 1.18
CDC42-204ENST00000411827 SGSM2O43147 1006 aa22.41■■□□□ 1.18
CDC42-204ENST00000411827 GMPSP49915 693 aaPredicted RBP22.41■■□□□ 1.18
CDC42-204ENST00000411827 KIAA1211Q6ZU35 1233 aa22.41■■□□□ 1.18
CDC42-204ENST00000411827 L3MBTL3Q96JM7 780 aaPredicted RBP22.41■■□□□ 1.18
CDC42-204ENST00000411827 ESYT1Q9BSJ8 1104 aa22.41■■□□□ 1.18
CDC42-204ENST00000411827 LMOD1P29536 600 aaPredicted RBP22.4■■□□□ 1.18
CDC42-204ENST00000411827 CRKP46108 304 aa22.4■■□□□ 1.18
CDC42-204ENST00000411827 GRIK5Q16478 980 aa22.4■■□□□ 1.18
CDC42-204ENST00000411827 OSBP2Q969R2 916 aa22.4■■□□□ 1.18
CDC42-204ENST00000411827 MXD3Q9BW11 206 aa22.4■■□□□ 1.18
CDC42-204ENST00000411827 ZNF646O15015 1829 aaPredicted RBP22.4■■□□□ 1.18
CDC42-204ENST00000411827 TIAM2Q8IVF5 1701 aa22.4■■□□□ 1.18
CDC42-204ENST00000411827 F8W031 263 aaPredicted RBP22.39■■□□□ 1.17
CDC42-204ENST00000411827 DLGAP5Q15398 846 aa22.39■■□□□ 1.17
CDC42-204ENST00000411827 ZNF384Q8TF68 577 aa22.39■■□□□ 1.17
CDC42-204ENST00000411827 FAM227BQ96M60 508 aa22.39■■□□□ 1.17
CDC42-204ENST00000411827 GPRC5DQ9NZD1 345 aa22.39■■□□□ 1.17
CDC42-204ENST00000411827 ZBTB12Q9Y330 459 aaPredicted RBP22.39■■□□□ 1.17
CDC42-204ENST00000411827 DAGLAQ9Y4D2 1042 aa22.39■■□□□ 1.17
CDC42-204ENST00000411827 CCDC171Q6TFL3 1326 aa22.38■■□□□ 1.17
CDC42-204ENST00000411827 A0A0D9SFI3 127 aa22.38■■□□□ 1.17
CDC42-204ENST00000411827 DIXDC1Q155Q3 683 aa22.38■■□□□ 1.17
CDC42-204ENST00000411827 CRNKL1Q9BZJ0 848 aaKnown RBP22.38■■□□□ 1.17
CDC42-204ENST00000411827 CNOT7Q9UIV1 285 aaKnown RBP22.38■■□□□ 1.17
CDC42-204ENST00000411827 IQCA1LA6NCM1 817 aa22.37■■□□□ 1.17
CDC42-204ENST00000411827 MYO1BO43795 1136 aa22.37■■□□□ 1.17
CDC42-204ENST00000411827 SCNN1DP51172 638 aa22.37■■□□□ 1.17
CDC42-204ENST00000411827 RBM5P52756 815 aaKnown RBP eCLIP22.37■■□□□ 1.17
CDC42-204ENST00000411827 C8orf34Q49A92 452 aa22.37■■□□□ 1.17
CDC42-204ENST00000411827 GIMAP6Q6P9H5 292 aa22.37■■□□□ 1.17
CDC42-204ENST00000411827 DDRGK1Q96HY6 314 aa22.37■■□□□ 1.17
CDC42-204ENST00000411827 STRBPQ96SI9 672 aaKnown RBP22.37■■□□□ 1.17
CDC42-204ENST00000411827 RIOK1Q9BRS2 568 aaKnown RBP22.37■■□□□ 1.17
CDC42-204ENST00000411827 PUS7LQ9H0K6 701 aaKnown RBP22.37■■□□□ 1.17
CDC42-204ENST00000411827 GPAA1O43292 621 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms