RNA–Protein interactions for RNA: ENST00000409889.1

CCDC148-203, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 1,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-203ENST00000409889 SRRDQ9UH36 339 aa13.62□□□□□ -0.23
CCDC148-203ENST00000409889 RIPOR2Q9Y4F9 1068 aa13.62□□□□□ -0.23
CCDC148-203ENST00000409889 CSADQ9Y600 493 aa13.62□□□□□ -0.23
CCDC148-203ENST00000409889 BTBD19C9JJ37 291 aa13.61□□□□□ -0.23
CCDC148-203ENST00000409889 CTGFP29279 349 aa13.61□□□□□ -0.23
CCDC148-203ENST00000409889 MAP3K9P80192 1104 aa13.61□□□□□ -0.23
CCDC148-203ENST00000409889 DEFB123Q8N688 67 aa13.61□□□□□ -0.23
CCDC148-203ENST00000409889 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.61□□□□□ -0.23
CCDC148-203ENST00000409889 ZCCHC17Q9NP64 241 aaKnown RBP13.61□□□□□ -0.23
CCDC148-203ENST00000409889 TRIM35Q9UPQ4 493 aa13.61□□□□□ -0.23
CCDC148-203ENST00000409889 SPDYE5A6NIY4 337 aa13.6□□□□□ -0.23
CCDC148-203ENST00000409889 DDX58O95786 925 aaKnown RBP13.6□□□□□ -0.23
CCDC148-203ENST00000409889 CETPP11597 493 aa13.6□□□□□ -0.23
CCDC148-203ENST00000409889 OSBPP22059 807 aa13.6□□□□□ -0.23
CCDC148-203ENST00000409889 PSMC4P43686 418 aa13.6□□□□□ -0.23
CCDC148-203ENST00000409889 FKBP1AP62942 108 aaKnown RBP13.6□□□□□ -0.23
CCDC148-203ENST00000409889 CHRNDQ07001 517 aa13.6□□□□□ -0.23
CCDC148-203ENST00000409889 SPDYE2Q495Y8 402 aa13.6□□□□□ -0.23
CCDC148-203ENST00000409889 U2AF1L4Q8WU68 220 aaKnown RBP13.6□□□□□ -0.23
CCDC148-203ENST00000409889 TRIM47Q96LD4 638 aa13.6□□□□□ -0.23
CCDC148-203ENST00000409889 TEPSINQ96N21 525 aa13.6□□□□□ -0.23
CCDC148-203ENST00000409889 MPHOSPH8Q99549 860 aa13.6□□□□□ -0.23
CCDC148-203ENST00000409889 COL25A1Q9BXS0 654 aaPredicted RBP13.6□□□□□ -0.23
CCDC148-203ENST00000409889 BIN2Q9UBW5 565 aaPredicted RBP13.6□□□□□ -0.23
CCDC148-203ENST00000409889 STAP2Q9UGK3 403 aa13.6□□□□□ -0.23
CCDC148-203ENST00000409889 JAG2Q9Y219 1238 aa13.6□□□□□ -0.23
CCDC148-203ENST00000409889 LAMA2P24043 3122 aaKnown RBP13.6□□□□□ -0.23
CCDC148-203ENST00000409889 MYPNQ86TC9 1320 aa13.6□□□□□ -0.23
CCDC148-203ENST00000409889 IRS2Q9Y4H2 1338 aa13.6□□□□□ -0.23
CCDC148-203ENST00000409889 SNAP23O00161 211 aa13.59□□□□□ -0.23
CCDC148-203ENST00000409889 IGKV5-2P06315 115 aa13.59□□□□□ -0.23
CCDC148-203ENST00000409889 ITGA6P23229 1130 aa13.59□□□□□ -0.23
CCDC148-203ENST00000409889 HOXD10P28358 340 aa13.59□□□□□ -0.23
CCDC148-203ENST00000409889 UBXN2AP68543 259 aa13.59□□□□□ -0.23
CCDC148-203ENST00000409889 GPR153Q6NV75 609 aa13.59□□□□□ -0.23
CCDC148-203ENST00000409889 C17orf99Q6UX52 265 aa13.59□□□□□ -0.23
CCDC148-203ENST00000409889 Q7L0L9 218 aa13.59□□□□□ -0.23
CCDC148-203ENST00000409889 CCDC146Q8IYE0 955 aa13.59□□□□□ -0.23
CCDC148-203ENST00000409889 TMEM39BQ9GZU3 492 aa13.59□□□□□ -0.23
CCDC148-203ENST00000409889 MBIPQ9NS73 344 aa13.59□□□□□ -0.23
CCDC148-203ENST00000409889 ZNF70Q9UC06 446 aaPredicted RBP13.59□□□□□ -0.23
CCDC148-203ENST00000409889 CPA4Q9UI42 421 aa13.59□□□□□ -0.23
CCDC148-203ENST00000409889 STXBP5LQ9Y2K9 1186 aa13.59□□□□□ -0.23
CCDC148-203ENST00000409889 MAP3K2Q9Y2U5 619 aa13.59□□□□□ -0.23
CCDC148-203ENST00000409889 IRF6O14896 467 aa13.58□□□□□ -0.24
CCDC148-203ENST00000409889 FMNL1O95466 1100 aaPredicted RBP13.58□□□□□ -0.24
CCDC148-203ENST00000409889 ATXN8OSP0DMR3 200 aa13.58□□□□□ -0.24
CCDC148-203ENST00000409889 IL1R1P14778 569 aa13.58□□□□□ -0.24
CCDC148-203ENST00000409889 SNAPC2Q13487 334 aa13.58□□□□□ -0.24
CCDC148-203ENST00000409889 ZNF804AQ7Z570 1209 aa13.58□□□□□ -0.24
CCDC148-203ENST00000409889 HELBQ8NG08 1087 aaPredicted RBP13.58□□□□□ -0.24
CCDC148-203ENST00000409889 TDRD3Q9H7E2 651 aaKnown RBP13.58□□□□□ -0.24
CCDC148-203ENST00000409889 SNCAIPQ9Y6H5 919 aa13.58□□□□□ -0.24
CCDC148-203ENST00000409889 TCP10L2B9ZVM9 353 aa13.57□□□□□ -0.24
CCDC148-203ENST00000409889 CWF19L2Q2TBE0 894 aaKnown RBP13.57□□□□□ -0.24
CCDC148-203ENST00000409889 C15orf52Q6ZUT6 534 aaKnown RBP13.57□□□□□ -0.24
CCDC148-203ENST00000409889 UBE3BQ7Z3V4 1068 aa13.57□□□□□ -0.24
CCDC148-203ENST00000409889 ERO1BQ86YB8 467 aa13.57□□□□□ -0.24
CCDC148-203ENST00000409889 UNC93B1Q9H1C4 597 aa13.57□□□□□ -0.24
CCDC148-203ENST00000409889 ELL2O00472 640 aaPredicted RBP13.56□□□□□ -0.24
CCDC148-203ENST00000409889 TAF5LO75529 589 aa13.56□□□□□ -0.24
CCDC148-203ENST00000409889 SGPL1O95470 568 aa13.56□□□□□ -0.24
CCDC148-203ENST00000409889 TNNI2P48788 182 aa13.56□□□□□ -0.24
CCDC148-203ENST00000409889 PRKCZQ05513 592 aa13.56□□□□□ -0.24
CCDC148-203ENST00000409889 SERPINA10Q9UK55 444 aa13.56□□□□□ -0.24
CCDC148-203ENST00000409889 PI4KAP2A4QPH2 592 aa13.55□□□□□ -0.24
CCDC148-203ENST00000409889 NEXNQ0ZGT2 675 aa13.55□□□□□ -0.24
CCDC148-203ENST00000409889 PPIL2Q13356 520 aa13.55□□□□□ -0.24
CCDC148-203ENST00000409889 PI4KAP1Q8N8J0 262 aa13.55□□□□□ -0.24
CCDC148-203ENST00000409889 SLAIN1Q8ND83 568 aa13.55□□□□□ -0.24
CCDC148-203ENST00000409889 ZKSCAN4Q969J2 545 aaPredicted RBP13.55□□□□□ -0.24
CCDC148-203ENST00000409889 WRNIP1Q96S55 665 aa13.55□□□□□ -0.24
CCDC148-203ENST00000409889 GDF15Q99988 308 aa13.55□□□□□ -0.24
CCDC148-203ENST00000409889 TTF2Q9UNY4 1162 aaKnown RBP13.55□□□□□ -0.24
CCDC148-203ENST00000409889 ADGRA2Q96PE1 1338 aa13.55□□□□□ -0.24
CCDC148-203ENST00000409889 NEURL1BA8MQ27 555 aa13.54□□□□□ -0.24
CCDC148-203ENST00000409889 BMP8BP34820 402 aa13.54□□□□□ -0.24
CCDC148-203ENST00000409889 MFSD14BQ5SR56 506 aa13.54□□□□□ -0.24
CCDC148-203ENST00000409889 KSR2Q6VAB6 950 aa13.54□□□□□ -0.24
CCDC148-203ENST00000409889 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.54□□□□□ -0.24
CCDC148-203ENST00000409889 DZIP1LQ8IYY4 767 aaKnown RBP13.54□□□□□ -0.24
CCDC148-203ENST00000409889 MTMR10Q9NXD2 777 aa13.54□□□□□ -0.24
CCDC148-203ENST00000409889 H7C1W4 665 aa13.53□□□□□ -0.24
CCDC148-203ENST00000409889 PDHXO00330 501 aa13.53□□□□□ -0.24
CCDC148-203ENST00000409889 TFRCP02786 760 aaKnown RBP13.53□□□□□ -0.24
CCDC148-203ENST00000409889 BCAMP50895 628 aa13.53□□□□□ -0.24
CCDC148-203ENST00000409889 ANKRD23Q86SG2 305 aa13.53□□□□□ -0.24
CCDC148-203ENST00000409889 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.53□□□□□ -0.24
CCDC148-203ENST00000409889 PLA2G12BQ9BX93 195 aa13.53□□□□□ -0.24
CCDC148-203ENST00000409889 PRUNE2Q8WUY3 3088 aa13.53□□□□□ -0.24
CCDC148-203ENST00000409889 MUC3AQ02505 3323 aa13.53□□□□□ -0.24
CCDC148-203ENST00000409889 ANKRD18BA2A2Z9 1011 aa13.52□□□□□ -0.25
CCDC148-203ENST00000409889 CSF1RP07333 972 aa13.52□□□□□ -0.25
CCDC148-203ENST00000409889 CRKP46108 304 aa13.52□□□□□ -0.25
CCDC148-203ENST00000409889 FCGRTP55899 365 aa13.52□□□□□ -0.25
CCDC148-203ENST00000409889 LRIT3Q3SXY7 679 aa13.52□□□□□ -0.25
CCDC148-203ENST00000409889 CCDC30Q5VVM6 783 aa13.52□□□□□ -0.25
CCDC148-203ENST00000409889 C7orf61Q8IZ16 206 aa13.52□□□□□ -0.25
CCDC148-203ENST00000409889 RUNDC1Q96C34 613 aa13.52□□□□□ -0.25
CCDC148-203ENST00000409889 PAWRQ96IZ0 340 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms