RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 GPRC5DQ9NZD1 345 aa25.02■■□□□ 1.6
C4orf48-202ENST00000409860 ZNF646O15015 1829 aaPredicted RBP25.01■■□□□ 1.59
C4orf48-202ENST00000409860 TRIM6-TRIM34B2RNG4 842 aa25.01■■□□□ 1.59
C4orf48-202ENST00000409860 H7C1D1 291 aa25.01■■□□□ 1.59
C4orf48-202ENST00000409860 CNTROBQ8N137 903 aa25.01■■□□□ 1.59
C4orf48-202ENST00000409860 EVI5LQ96CN4 794 aa25.01■■□□□ 1.59
C4orf48-202ENST00000409860 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.01■■□□□ 1.59
C4orf48-202ENST00000409860 CNOT7Q9UIV1 285 aaKnown RBP25.01■■□□□ 1.59
C4orf48-202ENST00000409860 IQCA1LA6NCM1 817 aa25■■□□□ 1.59
C4orf48-202ENST00000409860 SLF2Q8IX21 1173 aa25■■□□□ 1.59
C4orf48-202ENST00000409860 KBTBD3Q8NAB2 608 aa25■■□□□ 1.59
C4orf48-202ENST00000409860 ZNF280AP59817 542 aaPredicted RBP24.99■■□□□ 1.59
C4orf48-202ENST00000409860 GSTO1P78417 241 aa24.99■■□□□ 1.59
C4orf48-202ENST00000409860 MECOMQ03112 1051 aa24.99■■□□□ 1.59
C4orf48-202ENST00000409860 LRRFIP1Q32MZ4 808 aaKnown RBP24.99■■□□□ 1.59
C4orf48-202ENST00000409860 FSD1Q9BTV5 496 aa24.99■■□□□ 1.59
C4orf48-202ENST00000409860 HACL1Q9UJ83 578 aa24.99■■□□□ 1.59
C4orf48-202ENST00000409860 HDLBPQ00341 1268 aaKnown RBP24.98■■□□□ 1.59
C4orf48-202ENST00000409860 TMED8Q6PL24 325 aaPredicted RBP24.98■■□□□ 1.59
C4orf48-202ENST00000409860 TEKT1Q969V4 418 aa24.98■■□□□ 1.59
C4orf48-202ENST00000409860 RILPL2Q969X0 211 aa24.98■■□□□ 1.59
C4orf48-202ENST00000409860 NSUN4Q96CB9 384 aaKnown RBP24.98■■□□□ 1.59
C4orf48-202ENST00000409860 SERPINA10Q9UK55 444 aa24.98■■□□□ 1.59
C4orf48-202ENST00000409860 GSPT1P15170 499 aaKnown RBP24.97■■□□□ 1.59
C4orf48-202ENST00000409860 EPS15P42566 896 aa24.97■■□□□ 1.59
C4orf48-202ENST00000409860 NAA16Q6N069 864 aaPredicted RBP24.97■■□□□ 1.59
C4orf48-202ENST00000409860 ZSCAN25Q6NSZ9 544 aa24.97■■□□□ 1.59
C4orf48-202ENST00000409860 ZNF526Q8TF50 670 aaPredicted RBP24.97■■□□□ 1.59
C4orf48-202ENST00000409860 MRIQ9BWK5 157 aa24.97■■□□□ 1.59
C4orf48-202ENST00000409860 SHTN1A0MZ66 631 aa24.96■■□□□ 1.59
C4orf48-202ENST00000409860 LDHCP07864 332 aa24.96■■□□□ 1.59
C4orf48-202ENST00000409860 YY1P25490 414 aa24.96■■□□□ 1.59
C4orf48-202ENST00000409860 CRKP46108 304 aa24.96■■□□□ 1.59
C4orf48-202ENST00000409860 RBM5P52756 815 aaKnown RBP eCLIP24.96■■□□□ 1.59
C4orf48-202ENST00000409860 DIXDC1Q155Q3 683 aa24.96■■□□□ 1.59
C4orf48-202ENST00000409860 SLC9C2Q5TAH2 1124 aa24.96■■□□□ 1.59
C4orf48-202ENST00000409860 MAGEB6Q8N7X4 407 aa24.96■■□□□ 1.59
C4orf48-202ENST00000409860 MYOZ2Q9NPC6 264 aa24.96■■□□□ 1.59
C4orf48-202ENST00000409860 ADARB2Q9NS39 739 aaKnown RBP24.96■■□□□ 1.59
C4orf48-202ENST00000409860 WDR90Q96KV7 1748 aa24.95■■□□□ 1.59
C4orf48-202ENST00000409860 CFAP100Q494V2 611 aa24.95■■□□□ 1.58
C4orf48-202ENST00000409860 HHIPL2Q6UWX4 724 aa24.95■■□□□ 1.58
C4orf48-202ENST00000409860 PDE6AP16499 860 aa24.94■■□□□ 1.58
C4orf48-202ENST00000409860 EPHX2P34913 555 aa24.94■■□□□ 1.58
C4orf48-202ENST00000409860 DLGAP5Q15398 846 aa24.94■■□□□ 1.58
C4orf48-202ENST00000409860 KIF4BQ2VIQ3 1234 aa24.94■■□□□ 1.58
C4orf48-202ENST00000409860 MROH7-TTC4A0A0A0MT08 1334 aa24.93■■□□□ 1.58
C4orf48-202ENST00000409860 ZFYP08048 801 aaPredicted RBP24.93■■□□□ 1.58
C4orf48-202ENST00000409860 VEGFAP15692 232 aaPredicted RBP24.93■■□□□ 1.58
C4orf48-202ENST00000409860 SDSP20132 328 aa24.93■■□□□ 1.58
C4orf48-202ENST00000409860 CYP7A1P22680 504 aa24.93■■□□□ 1.58
C4orf48-202ENST00000409860 TBC1D10BQ4KMP7 808 aaPredicted RBP24.93■■□□□ 1.58
C4orf48-202ENST00000409860 BMP2KLQ5H9B9 411 aa24.93■■□□□ 1.58
C4orf48-202ENST00000409860 RBM26Q5T8P6 1007 aaKnown RBP24.93■■□□□ 1.58
C4orf48-202ENST00000409860 SAMD7Q7Z3H4 446 aa24.93■■□□□ 1.58
C4orf48-202ENST00000409860 TICAM2Q86XR7 235 aa24.93■■□□□ 1.58
C4orf48-202ENST00000409860 MTMR14Q8NCE2 650 aa24.93■■□□□ 1.58
C4orf48-202ENST00000409860 RRAGCQ9HB90 399 aa24.93■■□□□ 1.58
C4orf48-202ENST00000409860 RFX7Q2KHR2 1363 aa24.93■■□□□ 1.58
C4orf48-202ENST00000409860 GAKO14976 1311 aa24.92■■□□□ 1.58
C4orf48-202ENST00000409860 ADD2P35612 726 aa24.92■■□□□ 1.58
C4orf48-202ENST00000409860 UBE3CQ15386 1083 aa24.92■■□□□ 1.58
C4orf48-202ENST00000409860 ZNF384Q8TF68 577 aa24.92■■□□□ 1.58
C4orf48-202ENST00000409860 FAM163AQ96GL9 167 aaPredicted RBP24.92■■□□□ 1.58
C4orf48-202ENST00000409860 ZDHHC15Q96MV8 337 aa24.92■■□□□ 1.58
C4orf48-202ENST00000409860 NOL10Q9BSC4 688 aaKnown RBP24.92■■□□□ 1.58
C4orf48-202ENST00000409860 TAF1DQ9H5J8 278 aaPredicted RBP24.92■■□□□ 1.58
C4orf48-202ENST00000409860 GPBP1L1Q9HC44 474 aaPredicted RBP24.92■■□□□ 1.58
C4orf48-202ENST00000409860 DAGLAQ9Y4D2 1042 aa24.92■■□□□ 1.58
C4orf48-202ENST00000409860 MAST2Q6P0Q8 1798 aa24.92■■□□□ 1.58
C4orf48-202ENST00000409860 ZNF532Q9HCE3 1301 aa24.91■■□□□ 1.58
C4orf48-202ENST00000409860 POTECB2RU33 542 aa24.91■■□□□ 1.58
C4orf48-202ENST00000409860 RNF113AO15541 343 aaKnown RBP24.91■■□□□ 1.58
C4orf48-202ENST00000409860 USP50Q70EL3 339 aaPredicted RBP24.91■■□□□ 1.58
C4orf48-202ENST00000409860 TRPM4Q8TD43 1214 aa24.91■■□□□ 1.58
C4orf48-202ENST00000409860 NMRK2Q9NPI5 230 aa24.91■■□□□ 1.58
C4orf48-202ENST00000409860 DOCK2Q92608 1830 aa24.91■■□□□ 1.58
C4orf48-202ENST00000409860 SPDYE2BA6NHP3 402 aa24.9■■□□□ 1.58
C4orf48-202ENST00000409860 SPDYE6P0CI01 402 aa24.9■■□□□ 1.58
C4orf48-202ENST00000409860 PNMA8AQ86V59 439 aaPredicted RBP24.9■■□□□ 1.58
C4orf48-202ENST00000409860 SCN4AP35499 1836 aa24.89■■□□□ 1.58
C4orf48-202ENST00000409860 TCRBV5S4A2TA0A5A2 114 aa24.89■■□□□ 1.58
C4orf48-202ENST00000409860 HIP1O00291 1037 aa24.89■■□□□ 1.58
C4orf48-202ENST00000409860 BTDP43251 543 aa24.89■■□□□ 1.58
C4orf48-202ENST00000409860 ZBED3Q96IU2 234 aaPredicted RBP24.89■■□□□ 1.58
C4orf48-202ENST00000409860 GPR75-ASB3A0A0A6YYF3 556 aa24.88■■□□□ 1.57
C4orf48-202ENST00000409860 WNT10BO00744 389 aa24.88■■□□□ 1.57
C4orf48-202ENST00000409860 MYO1BO43795 1136 aa24.88■■□□□ 1.57
C4orf48-202ENST00000409860 BAG3O95817 575 aa24.88■■□□□ 1.57
C4orf48-202ENST00000409860 EGFRP00533 1210 aa24.88■■□□□ 1.57
C4orf48-202ENST00000409860 APOBEC3HQ6NTF7 200 aaKnown RBP24.88■■□□□ 1.57
C4orf48-202ENST00000409860 APPBP2Q92624 585 aa24.88■■□□□ 1.57
C4orf48-202ENST00000409860 PCDHAC2Q9Y5I4 1007 aa24.88■■□□□ 1.57
C4orf48-202ENST00000409860 EAPPQ56P03 285 aaPredicted RBP24.87■■□□□ 1.57
C4orf48-202ENST00000409860 ADGRA1Q86SQ6 560 aa24.87■■□□□ 1.57
C4orf48-202ENST00000409860 CERS3Q8IU89 383 aa24.87■■□□□ 1.57
C4orf48-202ENST00000409860 PRMT6Q96LA8 375 aaPredicted RBP24.87■■□□□ 1.57
C4orf48-202ENST00000409860 DIAPH3Q9NSV4 1193 aa24.87■■□□□ 1.57
C4orf48-202ENST00000409860 NBPF9Q3BBW0 867 aa24.86■■□□□ 1.57
C4orf48-202ENST00000409860 MIGA1Q8NAN2 632 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms