RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 SH2B1Q9NRF2 756 aaPredicted RBP16.78■□□□□ 0.28
LIMS2-206ENST00000409754 CTNNA3Q9UI47 895 aa16.78■□□□□ 0.28
LIMS2-206ENST00000409754 TIAM2Q8IVF5 1701 aa16.77■□□□□ 0.28
LIMS2-206ENST00000409754 DICER1Q9UPY3 1922 aaKnown RBP16.77■□□□□ 0.28
LIMS2-206ENST00000409754 DOCK2Q92608 1830 aa16.77■□□□□ 0.27
LIMS2-206ENST00000409754 CAVIN4Q5BKX8 364 aa16.77■□□□□ 0.27
LIMS2-206ENST00000409754 NEK1Q96PY6 1258 aa16.77■□□□□ 0.27
LIMS2-206ENST00000409754 ATP6V0A2Q9Y487 856 aa16.77■□□□□ 0.27
LIMS2-206ENST00000409754 TCRBV5S4A2TA0A5A2 114 aa16.76■□□□□ 0.27
LIMS2-206ENST00000409754 WTIPA6NIX2 430 aaPredicted RBP16.76■□□□□ 0.27
LIMS2-206ENST00000409754 GPAA1O43292 621 aa16.76■□□□□ 0.27
LIMS2-206ENST00000409754 CLEC17AQ6ZS10 378 aa16.76■□□□□ 0.27
LIMS2-206ENST00000409754 GBP4Q96PP9 640 aa16.76■□□□□ 0.27
LIMS2-206ENST00000409754 ZNF532Q9HCE3 1301 aa16.75■□□□□ 0.27
LIMS2-206ENST00000409754 ZBTB22O15209 634 aa16.75■□□□□ 0.27
LIMS2-206ENST00000409754 FOXP2O15409 715 aa16.75■□□□□ 0.27
LIMS2-206ENST00000409754 HMGB1P09429 215 aaKnown RBP16.75■□□□□ 0.27
LIMS2-206ENST00000409754 SEMA3EO15041 775 aa16.74■□□□□ 0.27
LIMS2-206ENST00000409754 BBOX1O75936 387 aa16.74■□□□□ 0.27
LIMS2-206ENST00000409754 GYG1P46976 350 aa16.74■□□□□ 0.27
LIMS2-206ENST00000409754 FBXO33Q7Z6M2 555 aa16.74■□□□□ 0.27
LIMS2-206ENST00000409754 FAM84BQ96KN1 310 aaPredicted RBP16.74■□□□□ 0.27
LIMS2-206ENST00000409754 MYO5AQ9Y4I1 1855 aaKnown RBP16.74■□□□□ 0.27
LIMS2-206ENST00000409754 DDX11L8A8MPP1 907 aa16.74■□□□□ 0.27
LIMS2-206ENST00000409754 CCDC93Q567U6 631 aa16.74■□□□□ 0.27
LIMS2-206ENST00000409754 ARHGAP27Q6ZUM4 889 aa16.74■□□□□ 0.27
LIMS2-206ENST00000409754 STOX1Q6ZVD7 989 aa16.74■□□□□ 0.27
LIMS2-206ENST00000409754 DENND2AQ9ULE3 1009 aa16.74■□□□□ 0.27
LIMS2-206ENST00000409754 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.74■□□□□ 0.27
LIMS2-206ENST00000409754 GRIN3BO60391 1043 aa16.73■□□□□ 0.27
LIMS2-206ENST00000409754 GPSM2P81274 684 aa16.73■□□□□ 0.27
LIMS2-206ENST00000409754 COL9A3Q14050 684 aaPredicted RBP16.73■□□□□ 0.27
LIMS2-206ENST00000409754 VPS37DQ86XT2 251 aa16.73■□□□□ 0.27
LIMS2-206ENST00000409754 SP8Q8IXZ3 490 aa16.73■□□□□ 0.27
LIMS2-206ENST00000409754 MAGEB6Q8N7X4 407 aa16.73■□□□□ 0.27
LIMS2-206ENST00000409754 PDS5AQ29RF7 1337 aaKnown RBP16.72■□□□□ 0.27
LIMS2-206ENST00000409754 LTBP3Q9NS15 1303 aa16.72■□□□□ 0.27
LIMS2-206ENST00000409754 E7EWF7 191 aa16.72■□□□□ 0.27
LIMS2-206ENST00000409754 LARGE1O95461 756 aa16.72■□□□□ 0.27
LIMS2-206ENST00000409754 FGAP02671 866 aa16.72■□□□□ 0.27
LIMS2-206ENST00000409754 TOB2Q14106 344 aaPredicted RBP16.72■□□□□ 0.27
LIMS2-206ENST00000409754 IMMTQ16891 758 aaKnown RBP16.72■□□□□ 0.27
LIMS2-206ENST00000409754 LARP6Q9BRS8 491 aaKnown RBP16.72■□□□□ 0.27
LIMS2-206ENST00000409754 TPCN1Q9ULQ1 816 aa16.72■□□□□ 0.27
LIMS2-206ENST00000409754 ZNF646O15015 1829 aaPredicted RBP16.71■□□□□ 0.27
LIMS2-206ENST00000409754 PKP1Q13835 747 aa16.71■□□□□ 0.27
LIMS2-206ENST00000409754 ME3Q16798 604 aa16.71■□□□□ 0.27
LIMS2-206ENST00000409754 TTLL5Q6EMB2 1281 aa16.71■□□□□ 0.27
LIMS2-206ENST00000409754 DHX32Q7L7V1 743 aaKnown RBP16.71■□□□□ 0.27
LIMS2-206ENST00000409754 AIDAQ96BJ3 306 aa16.71■□□□□ 0.27
LIMS2-206ENST00000409754 STRBPQ96SI9 672 aaKnown RBP16.71■□□□□ 0.27
LIMS2-206ENST00000409754 LRP2BPQ9P2M1 347 aa16.71■□□□□ 0.27
LIMS2-206ENST00000409754 LEMD3Q9Y2U8 911 aa16.71■□□□□ 0.27
LIMS2-206ENST00000409754 COL1A1P02452 1464 aaPredicted RBP16.71■□□□□ 0.27
LIMS2-206ENST00000409754 IRS2Q9Y4H2 1338 aa16.71■□□□□ 0.27
LIMS2-206ENST00000409754 PTMSP20962 102 aa16.7■□□□□ 0.26
LIMS2-206ENST00000409754 TCEANC2Q96MN5 208 aa16.7■□□□□ 0.26
LIMS2-206ENST00000409754 GPR101Q96P66 508 aaPredicted RBP16.7■□□□□ 0.26
LIMS2-206ENST00000409754 RTFDC1Q9BY42 306 aaPredicted RBP16.7■□□□□ 0.26
LIMS2-206ENST00000409754 ZDHHC9Q9Y397 364 aa16.7■□□□□ 0.26
LIMS2-206ENST00000409754 ZMYM6O95789 1325 aa16.7■□□□□ 0.26
LIMS2-206ENST00000409754 BRD1O95696 1058 aa16.7■□□□□ 0.26
LIMS2-206ENST00000409754 KLRK1P26718 216 aa16.7■□□□□ 0.26
LIMS2-206ENST00000409754 HIBADHP31937 336 aaKnown RBP16.7■□□□□ 0.26
LIMS2-206ENST00000409754 ALX1Q15699 326 aa16.7■□□□□ 0.26
LIMS2-206ENST00000409754 TAOK3Q9H2K8 898 aa16.7■□□□□ 0.26
LIMS2-206ENST00000409754 ZNF277Q9NRM2 450 aaPredicted RBP16.7■□□□□ 0.26
LIMS2-206ENST00000409754 POLLQ9UGP5 575 aa16.7■□□□□ 0.26
LIMS2-206ENST00000409754 IQSEC3Q9UPP2 1182 aaPredicted RBP16.7■□□□□ 0.26
LIMS2-206ENST00000409754 XDHP47989 1333 aa16.69■□□□□ 0.26
LIMS2-206ENST00000409754 SCN9AQ15858 1988 aa16.69■□□□□ 0.26
LIMS2-206ENST00000409754 BAG4O95429 457 aaKnown RBP16.69■□□□□ 0.26
LIMS2-206ENST00000409754 EXOSC10Q01780 885 aaKnown RBP16.69■□□□□ 0.26
LIMS2-206ENST00000409754 ST3GAL1Q11201 340 aa16.69■□□□□ 0.26
LIMS2-206ENST00000409754 Q6ZUG5 572 aa16.69■□□□□ 0.26
LIMS2-206ENST00000409754 TMC4Q7Z404 712 aa16.69■□□□□ 0.26
LIMS2-206ENST00000409754 CCDC83Q8IWF9 413 aa16.69■□□□□ 0.26
LIMS2-206ENST00000409754 PSMD1Q99460 953 aa16.69■□□□□ 0.26
LIMS2-206ENST00000409754 SMC3Q9UQE7 1217 aa16.69■□□□□ 0.26
LIMS2-206ENST00000409754 ZNF213O14771 459 aa16.68■□□□□ 0.26
LIMS2-206ENST00000409754 MBD4O95243 580 aa16.68■□□□□ 0.26
LIMS2-206ENST00000409754 GNAT2P19087 354 aa16.68■□□□□ 0.26
LIMS2-206ENST00000409754 SOGA3Q5TF21 947 aa16.68■□□□□ 0.26
LIMS2-206ENST00000409754 CC2D2BQ6DHV5 1058 aa16.68■□□□□ 0.26
LIMS2-206ENST00000409754 C15orf52Q6ZUT6 534 aaKnown RBP16.68■□□□□ 0.26
LIMS2-206ENST00000409754 AGXT2Q9BYV1 514 aa16.68■□□□□ 0.26
LIMS2-206ENST00000409754 PODXL2Q9NZ53 605 aa16.68■□□□□ 0.26
LIMS2-206ENST00000409754 ANKIB1Q9P2G1 1089 aa16.68■□□□□ 0.26
LIMS2-206ENST00000409754 LAMA4Q16363 1823 aa16.68■□□□□ 0.26
LIMS2-206ENST00000409754 PATL2C9JE40 543 aaKnown RBP16.67■□□□□ 0.26
LIMS2-206ENST00000409754 RTKN2Q8IZC4 609 aa16.67■□□□□ 0.26
LIMS2-206ENST00000409754 FBXL16Q8N461 479 aa16.67■□□□□ 0.26
LIMS2-206ENST00000409754 TBC1D16Q8TBP0 767 aa16.67■□□□□ 0.26
LIMS2-206ENST00000409754 ABCF2Q9UG63 623 aa16.67■□□□□ 0.26
LIMS2-206ENST00000409754 GOLGA6L22H0YM25 854 aa16.67■□□□□ 0.26
LIMS2-206ENST00000409754 APPP05067 770 aa16.67■□□□□ 0.26
LIMS2-206ENST00000409754 HAND2P61296 217 aa16.67■□□□□ 0.26
LIMS2-206ENST00000409754 C9orf131Q5VYM1 1079 aa16.67■□□□□ 0.26
LIMS2-206ENST00000409754 TMED8Q6PL24 325 aaPredicted RBP16.67■□□□□ 0.26
LIMS2-206ENST00000409754 DPP8Q6V1X1 898 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms