RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 SPDYE2Q495Y8 402 aa24.37■■□□□ 1.49
TSPAN4-209ENST00000409543 ARMC9Q7Z3E5 817 aa24.37■■□□□ 1.49
TSPAN4-209ENST00000409543 MRIQ9BWK5 157 aa24.37■■□□□ 1.49
TSPAN4-209ENST00000409543 ZNF70Q9UC06 446 aaPredicted RBP24.37■■□□□ 1.49
TSPAN4-209ENST00000409543 REM2Q8IYK8 340 aaPredicted RBP24.36■■□□□ 1.49
TSPAN4-209ENST00000409543 WDR66Q8TBY9 1149 aa24.36■■□□□ 1.49
TSPAN4-209ENST00000409543 TDRD3Q9H7E2 651 aaKnown RBP24.36■■□□□ 1.49
TSPAN4-209ENST00000409543 TSKSQ9UJT2 592 aa24.36■■□□□ 1.49
TSPAN4-209ENST00000409543 SUPT20HL1Q3ZLR7 823 aa24.35■■□□□ 1.49
TSPAN4-209ENST00000409543 GNL3LQ9NVN8 582 aaKnown RBP24.35■■□□□ 1.49
TSPAN4-209ENST00000409543 MAST3O60307 1309 aa24.35■■□□□ 1.49
TSPAN4-209ENST00000409543 TNFAIP1Q13829 316 aa24.34■■□□□ 1.49
TSPAN4-209ENST00000409543 PRKG1Q13976 671 aa24.34■■□□□ 1.49
TSPAN4-209ENST00000409543 RASA3Q14644 834 aa24.34■■□□□ 1.49
TSPAN4-209ENST00000409543 LDLRAD1Q5T700 205 aa24.34■■□□□ 1.49
TSPAN4-209ENST00000409543 TEKT1Q969V4 418 aa24.34■■□□□ 1.49
TSPAN4-209ENST00000409543 CSRNP1Q96S65 589 aa24.34■■□□□ 1.49
TSPAN4-209ENST00000409543 ZBTB22O15209 634 aa24.33■■□□□ 1.49
TSPAN4-209ENST00000409543 FTSJ3Q8IY81 847 aaKnown RBP24.33■■□□□ 1.49
TSPAN4-209ENST00000409543 SAGE1Q9NXZ1 904 aa24.33■■□□□ 1.49
TSPAN4-209ENST00000409543 ANGEL1Q9UNK9 670 aaKnown RBP24.33■■□□□ 1.49
TSPAN4-209ENST00000409543 MYH13Q9UKX3 1938 aa24.32■■□□□ 1.48
TSPAN4-209ENST00000409543 SEMA3EO15041 775 aa24.32■■□□□ 1.48
TSPAN4-209ENST00000409543 PPP1R12BO60237 982 aaPredicted RBP24.32■■□□□ 1.48
TSPAN4-209ENST00000409543 MAP3K11Q16584 847 aa24.32■■□□□ 1.48
TSPAN4-209ENST00000409543 NBPF12Q5TAG4 269 aaPredicted RBP24.32■■□□□ 1.48
TSPAN4-209ENST00000409543 ZDHHC15Q96MV8 337 aa24.32■■□□□ 1.48
TSPAN4-209ENST00000409543 AKAP2Q9Y2D5 859 aa24.32■■□□□ 1.48
TSPAN4-209ENST00000409543 SSC5DA1L4H1 1573 aa24.32■■□□□ 1.48
TSPAN4-209ENST00000409543 PNMA6EA0A0J9YXQ4 647 aa24.31■■□□□ 1.48
TSPAN4-209ENST00000409543 PHKA1P46020 1223 aa24.31■■□□□ 1.48
TSPAN4-209ENST00000409543 TFCP2Q12800 502 aa24.31■■□□□ 1.48
TSPAN4-209ENST00000409543 ADORA1P30542 326 aa24.3■■□□□ 1.48
TSPAN4-209ENST00000409543 TIMM10P62072 90 aa24.3■■□□□ 1.48
TSPAN4-209ENST00000409543 CCDC102BQ68D86 513 aa24.3■■□□□ 1.48
TSPAN4-209ENST00000409543 HHIPL2Q6UWX4 724 aa24.3■■□□□ 1.48
TSPAN4-209ENST00000409543 RNF186Q9NXI6 227 aa24.3■■□□□ 1.48
TSPAN4-209ENST00000409543 DENND2AQ9ULE3 1009 aa24.3■■□□□ 1.48
TSPAN4-209ENST00000409543 FZD1Q9UP38 647 aa24.3■■□□□ 1.48
TSPAN4-209ENST00000409543 UNCXA6NJT0 531 aa24.29■■□□□ 1.48
TSPAN4-209ENST00000409543 RLBP1P12271 317 aa24.29■■□□□ 1.48
TSPAN4-209ENST00000409543 TNNI2P48788 182 aa24.29■■□□□ 1.48
TSPAN4-209ENST00000409543 SALL1Q9NSC2 1324 aa24.29■■□□□ 1.48
TSPAN4-209ENST00000409543 AKAP11Q9UKA4 1901 aa24.28■■□□□ 1.48
TSPAN4-209ENST00000409543 A0A1B0GUL7 405 aa24.28■■□□□ 1.48
TSPAN4-209ENST00000409543 TCP10L2B9ZVM9 353 aa24.28■■□□□ 1.48
TSPAN4-209ENST00000409543 APOBEC3HQ6NTF7 200 aaKnown RBP24.28■■□□□ 1.48
TSPAN4-209ENST00000409543 ITPRIPQ8IWB1 547 aa24.28■■□□□ 1.48
TSPAN4-209ENST00000409543 ZBTB7BO15156 539 aaPredicted RBP24.27■■□□□ 1.48
TSPAN4-209ENST00000409543 TRPA1O75762 1119 aa24.27■■□□□ 1.48
TSPAN4-209ENST00000409543 ATP8B2P98198 1209 aa24.27■■□□□ 1.48
TSPAN4-209ENST00000409543 G3BP1Q13283 466 aaKnown RBP eCLIP24.27■■□□□ 1.48
TSPAN4-209ENST00000409543 XAGE2Q96GT9 111 aa24.27■■□□□ 1.48
TSPAN4-209ENST00000409543 TEPSINQ96N21 525 aa24.27■■□□□ 1.48
TSPAN4-209ENST00000409543 USP2O75604 605 aaPredicted RBP24.26■■□□□ 1.47
TSPAN4-209ENST00000409543 LDHBP07195 334 aaKnown RBP24.26■■□□□ 1.47
TSPAN4-209ENST00000409543 POLA2Q14181 598 aa24.26■■□□□ 1.47
TSPAN4-209ENST00000409543 FKBP1CQ5VVH2 108 aa24.26■■□□□ 1.47
TSPAN4-209ENST00000409543 SPRYD7Q5W111 196 aa24.26■■□□□ 1.47
TSPAN4-209ENST00000409543 SLC10A4Q96EP9 437 aa24.26■■□□□ 1.47
TSPAN4-209ENST00000409543 TMOD2Q9NZR1 351 aa24.26■■□□□ 1.47
TSPAN4-209ENST00000409543 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.26■■□□□ 1.47
TSPAN4-209ENST00000409543 CAPN15O75808 1086 aa24.25■■□□□ 1.47
TSPAN4-209ENST00000409543 IREB2P48200 963 aaKnown RBP24.25■■□□□ 1.47
TSPAN4-209ENST00000409543 TM4SF4P48230 202 aa24.25■■□□□ 1.47
TSPAN4-209ENST00000409543 MVPQ14764 893 aaKnown RBP24.25■■□□□ 1.47
TSPAN4-209ENST00000409543 SSH3Q8TE77 659 aa24.25■■□□□ 1.47
TSPAN4-209ENST00000409543 TMEM39BQ9GZU3 492 aa24.25■■□□□ 1.47
TSPAN4-209ENST00000409543 PDS5AQ29RF7 1337 aaKnown RBP24.25■■□□□ 1.47
TSPAN4-209ENST00000409543 PRDX5P30044 214 aa24.24■■□□□ 1.47
TSPAN4-209ENST00000409543 RASGRF1Q13972 1273 aa24.24■■□□□ 1.47
TSPAN4-209ENST00000409543 FAM83AQ86UY5 434 aa24.24■■□□□ 1.47
TSPAN4-209ENST00000409543 ZGPATQ8N5A5 531 aaKnown RBP24.24■■□□□ 1.47
TSPAN4-209ENST00000409543 NEUROD6Q96NK8 337 aa24.24■■□□□ 1.47
TSPAN4-209ENST00000409543 CASP8AP2Q9UKL3 1982 aa24.23■■□□□ 1.47
TSPAN4-209ENST00000409543 CACNB3P54284 484 aa24.23■■□□□ 1.47
TSPAN4-209ENST00000409543 MKRN3Q13064 507 aaKnown RBP24.23■■□□□ 1.47
TSPAN4-209ENST00000409543 CDAN1Q8IWY9 1227 aa24.23■■□□□ 1.47
TSPAN4-209ENST00000409543 ANKRD13AQ8IZ07 590 aa24.23■■□□□ 1.47
TSPAN4-209ENST00000409543 CLMNQ96JQ2 1002 aa24.23■■□□□ 1.47
TSPAN4-209ENST00000409543 C1orf115Q9H7X2 142 aa24.23■■□□□ 1.47
TSPAN4-209ENST00000409543 SREBF2Q12772 1141 aa24.22■■□□□ 1.47
TSPAN4-209ENST00000409543 DIXDC1Q155Q3 683 aa24.22■■□□□ 1.47
TSPAN4-209ENST00000409543 DAGLAQ9Y4D2 1042 aa24.22■■□□□ 1.47
TSPAN4-209ENST00000409543 ZBTB48P10074 688 aaPredicted RBP24.21■■□□□ 1.47
TSPAN4-209ENST00000409543 MS4A1P11836 297 aa24.21■■□□□ 1.47
TSPAN4-209ENST00000409543 GORABQ5T7V8 394 aa24.2■■□□□ 1.46
TSPAN4-209ENST00000409543 PANK1Q8TE04 598 aa24.2■■□□□ 1.46
TSPAN4-209ENST00000409543 WNK4Q96J92 1243 aa24.2■■□□□ 1.46
TSPAN4-209ENST00000409543 GPR108Q9NPR9 543 aa24.2■■□□□ 1.46
TSPAN4-209ENST00000409543 MANSC4A6NHS7 340 aaPredicted RBP24.19■■□□□ 1.46
TSPAN4-209ENST00000409543 SURF6O75683 361 aaKnown RBP24.19■■□□□ 1.46
TSPAN4-209ENST00000409543 INHBEP58166 350 aa24.19■■□□□ 1.46
TSPAN4-209ENST00000409543 SPTY2D1Q68D10 685 aaPredicted RBP24.19■■□□□ 1.46
TSPAN4-209ENST00000409543 CDC42EP5Q6NZY7 148 aa24.19■■□□□ 1.46
TSPAN4-209ENST00000409543 HOOK2Q96ED9 719 aa24.19■■□□□ 1.46
TSPAN4-209ENST00000409543 NOP58Q9Y2X3 529 aaKnown RBP24.19■■□□□ 1.46
TSPAN4-209ENST00000409543 ABHD8Q96I13 439 aa24.18■■□□□ 1.46
TSPAN4-209ENST00000409543 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.18■■□□□ 1.46
TSPAN4-209ENST00000409543 ABCF2Q9UG63 623 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms