RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 MEIS3Q99687 375 aa11.27□□□□□ -0.61
SNORD88A-201ENST00000408314 MRIQ9BWK5 157 aa11.27□□□□□ -0.61
SNORD88A-201ENST00000408314 SIL1Q9H173 461 aa11.27□□□□□ -0.61
SNORD88A-201ENST00000408314 AKAP2Q9Y2D5 859 aa11.27□□□□□ -0.61
SNORD88A-201ENST00000408314 AKAP11Q9UKA4 1901 aa11.27□□□□□ -0.61
SNORD88A-201ENST00000408314 MYH13Q9UKX3 1938 aa11.27□□□□□ -0.61
SNORD88A-201ENST00000408314 CLRN2A0PK11 232 aa11.26□□□□□ -0.61
SNORD88A-201ENST00000408314 UBE2Q2LH0YL09 131 aa11.26□□□□□ -0.61
SNORD88A-201ENST00000408314 SRGAP3O43295 1099 aa11.26□□□□□ -0.61
SNORD88A-201ENST00000408314 BCAMP50895 628 aa11.26□□□□□ -0.61
SNORD88A-201ENST00000408314 MAP3K11Q16584 847 aa11.26□□□□□ -0.61
SNORD88A-201ENST00000408314 ATG9AQ7Z3C6 839 aa11.26□□□□□ -0.61
SNORD88A-201ENST00000408314 PRMT6Q96LA8 375 aaPredicted RBP11.26□□□□□ -0.61
SNORD88A-201ENST00000408314 ZNF70Q9UC06 446 aaPredicted RBP11.26□□□□□ -0.61
SNORD88A-201ENST00000408314 DENND2AQ9ULE3 1009 aa11.26□□□□□ -0.61
SNORD88A-201ENST00000408314 ANGEL1Q9UNK9 670 aaKnown RBP11.26□□□□□ -0.61
SNORD88A-201ENST00000408314 IQSEC3Q9UPP2 1182 aaPredicted RBP11.26□□□□□ -0.61
SNORD88A-201ENST00000408314 ALDH1A1P00352 501 aa11.25□□□□□ -0.61
SNORD88A-201ENST00000408314 ZBTB48P10074 688 aaPredicted RBP11.25□□□□□ -0.61
SNORD88A-201ENST00000408314 MS4A1P11836 297 aa11.25□□□□□ -0.61
SNORD88A-201ENST00000408314 INHBEP58166 350 aa11.25□□□□□ -0.61
SNORD88A-201ENST00000408314 RASA3Q14644 834 aa11.25□□□□□ -0.61
SNORD88A-201ENST00000408314 MVPQ14764 893 aaKnown RBP11.25□□□□□ -0.61
SNORD88A-201ENST00000408314 LDLRAD1Q5T700 205 aa11.25□□□□□ -0.61
SNORD88A-201ENST00000408314 FKBP1CQ5VVH2 108 aa11.25□□□□□ -0.61
SNORD88A-201ENST00000408314 PRAMEF18Q5VWM3 479 aa11.25□□□□□ -0.61
SNORD88A-201ENST00000408314 HHIPL2Q6UWX4 724 aa11.25□□□□□ -0.61
SNORD88A-201ENST00000408314 SLF2Q8IX21 1173 aa11.25□□□□□ -0.61
SNORD88A-201ENST00000408314 ZDHHC15Q96MV8 337 aa11.25□□□□□ -0.61
SNORD88A-201ENST00000408314 SCAF8Q9UPN6 1271 aaKnown RBP11.25□□□□□ -0.61
SNORD88A-201ENST00000408314 MANSC4A6NHS7 340 aaPredicted RBP11.24□□□□□ -0.61
SNORD88A-201ENST00000408314 CAPN15O75808 1086 aa11.24□□□□□ -0.61
SNORD88A-201ENST00000408314 BCAR3O75815 825 aa11.24□□□□□ -0.61
SNORD88A-201ENST00000408314 G3BP1Q13283 466 aaKnown RBP eCLIP11.24□□□□□ -0.61
SNORD88A-201ENST00000408314 PRKG1Q13976 671 aa11.24□□□□□ -0.61
SNORD88A-201ENST00000408314 ANKRD13AQ8IZ07 590 aa11.24□□□□□ -0.61
SNORD88A-201ENST00000408314 SLC10A4Q96EP9 437 aa11.24□□□□□ -0.61
SNORD88A-201ENST00000408314 CSRNP1Q96S65 589 aa11.24□□□□□ -0.61
SNORD88A-201ENST00000408314 TDRD3Q9H7E2 651 aaKnown RBP11.24□□□□□ -0.61
SNORD88A-201ENST00000408314 RNF186Q9NXI6 227 aa11.24□□□□□ -0.61
SNORD88A-201ENST00000408314 TSKSQ9UJT2 592 aa11.24□□□□□ -0.61
SNORD88A-201ENST00000408314 PDS5AQ29RF7 1337 aaKnown RBP11.24□□□□□ -0.61
SNORD88A-201ENST00000408314 SALL1Q9NSC2 1324 aa11.24□□□□□ -0.61
SNORD88A-201ENST00000408314 TRPA1O75762 1119 aa11.23□□□□□ -0.61
SNORD88A-201ENST00000408314 LDHBP07195 334 aaKnown RBP11.23□□□□□ -0.61
SNORD88A-201ENST00000408314 SPTY2D1Q68D10 685 aaPredicted RBP11.23□□□□□ -0.61
SNORD88A-201ENST00000408314 OTUD7BQ6GQQ9 843 aa11.23□□□□□ -0.61
SNORD88A-201ENST00000408314 MOB2Q70IA6 237 aa11.23□□□□□ -0.61
SNORD88A-201ENST00000408314 FAM83AQ86UY5 434 aa11.23□□□□□ -0.61
SNORD88A-201ENST00000408314 CLUAP1Q96AJ1 413 aa11.23□□□□□ -0.61
SNORD88A-201ENST00000408314 ZIC5Q96T25 663 aa11.23□□□□□ -0.61
SNORD88A-201ENST00000408314 RPAP1Q9BWH6 1393 aaPredicted RBP11.23□□□□□ -0.61
SNORD88A-201ENST00000408314 SSC5DA1L4H1 1573 aa11.22□□□□□ -0.61
SNORD88A-201ENST00000408314 TM4SF4P48230 202 aa11.22□□□□□ -0.61
SNORD88A-201ENST00000408314 NOM1Q5C9Z4 860 aaKnown RBP11.22□□□□□ -0.61
SNORD88A-201ENST00000408314 GORABQ5T7V8 394 aa11.22□□□□□ -0.61
SNORD88A-201ENST00000408314 NBPF12Q5TAG4 269 aaPredicted RBP11.22□□□□□ -0.61
SNORD88A-201ENST00000408314 SPRYD7Q5W111 196 aa11.22□□□□□ -0.61
SNORD88A-201ENST00000408314 DCAF15Q66K64 600 aa11.22□□□□□ -0.61
SNORD88A-201ENST00000408314 TMEM57Q8N5G2 664 aa11.22□□□□□ -0.61
SNORD88A-201ENST00000408314 PA2G4Q9UQ80 394 aaKnown RBP11.22□□□□□ -0.61
SNORD88A-201ENST00000408314 PCDHAC2Q9Y5I4 1007 aa11.22□□□□□ -0.61
SNORD88A-201ENST00000408314 CSADQ9Y600 493 aa11.22□□□□□ -0.61
SNORD88A-201ENST00000408314 A0A1B0GUL7 405 aa11.21□□□□□ -0.61
SNORD88A-201ENST00000408314 TCP10L2B9ZVM9 353 aa11.21□□□□□ -0.61
SNORD88A-201ENST00000408314 OS9Q13438 667 aaPredicted RBP11.21□□□□□ -0.61
SNORD88A-201ENST00000408314 DGKZQ13574 1117 aa11.21□□□□□ -0.61
SNORD88A-201ENST00000408314 CCDC102BQ68D86 513 aa11.21□□□□□ -0.61
SNORD88A-201ENST00000408314 DZIP1Q86YF9 867 aaKnown RBP11.21□□□□□ -0.61
SNORD88A-201ENST00000408314 ITPRIPQ8IWB1 547 aa11.21□□□□□ -0.61
SNORD88A-201ENST00000408314 ABHD8Q96I13 439 aa11.21□□□□□ -0.61
SNORD88A-201ENST00000408314 CHMP4BQ9H444 224 aaKnown RBP11.21□□□□□ -0.61
SNORD88A-201ENST00000408314 WDHD1O75717 1129 aaPredicted RBP11.2□□□□□ -0.62
SNORD88A-201ENST00000408314 PHKA1P46020 1223 aa11.2□□□□□ -0.62
SNORD88A-201ENST00000408314 TFCP2Q12800 502 aa11.2□□□□□ -0.62
SNORD88A-201ENST00000408314 WNK4Q96J92 1243 aa11.2□□□□□ -0.62
SNORD88A-201ENST00000408314 CFHR5Q9BXR6 569 aa11.2□□□□□ -0.62
SNORD88A-201ENST00000408314 IGSF3O75054 1194 aa11.19□□□□□ -0.62
SNORD88A-201ENST00000408314 USP2O75604 605 aaPredicted RBP11.19□□□□□ -0.62
SNORD88A-201ENST00000408314 UQCRFS1P1P0C7P4 283 aa11.19□□□□□ -0.62
SNORD88A-201ENST00000408314 GSTO1P78417 241 aa11.19□□□□□ -0.62
SNORD88A-201ENST00000408314 MAP3K9P80192 1104 aa11.19□□□□□ -0.62
SNORD88A-201ENST00000408314 MKRN3Q13064 507 aaKnown RBP11.19□□□□□ -0.62
SNORD88A-201ENST00000408314 PKN2Q16513 984 aaKnown RBP11.19□□□□□ -0.62
SNORD88A-201ENST00000408314 APOBEC3HQ6NTF7 200 aaKnown RBP11.19□□□□□ -0.62
SNORD88A-201ENST00000408314 XAGE2Q96GT9 111 aa11.19□□□□□ -0.62
SNORD88A-201ENST00000408314 TEPSINQ96N21 525 aa11.19□□□□□ -0.62
SNORD88A-201ENST00000408314 NEUROD6Q96NK8 337 aa11.19□□□□□ -0.62
SNORD88A-201ENST00000408314 TMEM39BQ9GZU3 492 aa11.19□□□□□ -0.62
SNORD88A-201ENST00000408314 GPR108Q9NPR9 543 aa11.19□□□□□ -0.62
SNORD88A-201ENST00000408314 DAGLAQ9Y4D2 1042 aa11.19□□□□□ -0.62
SNORD88A-201ENST00000408314 CASP8AP2Q9UKL3 1982 aa11.19□□□□□ -0.62
SNORD88A-201ENST00000408314 LAMB1P07942 1786 aa11.18□□□□□ -0.62
SNORD88A-201ENST00000408314 AOX1Q06278 1338 aa11.18□□□□□ -0.62
SNORD88A-201ENST00000408314 MAP4K4O95819 1239 aaPredicted RBP11.18□□□□□ -0.62
SNORD88A-201ENST00000408314 PRDX5P30044 214 aa11.18□□□□□ -0.62
SNORD88A-201ENST00000408314 ADORA1P30542 326 aa11.18□□□□□ -0.62
SNORD88A-201ENST00000408314 TIMM10P62072 90 aa11.18□□□□□ -0.62
SNORD88A-201ENST00000408314 ATP8B2P98198 1209 aa11.18□□□□□ -0.62
SNORD88A-201ENST00000408314 RASGRF1Q13972 1273 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms