RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 TBC1D22AQ8WUA7 517 aa24.04■■□□□ 1.44
SMARCB1-204ENST00000407422 ZNF70Q9UC06 446 aaPredicted RBP24.04■■□□□ 1.44
SMARCB1-204ENST00000407422 PPP2R3BQ9Y5P8 575 aa24.04■■□□□ 1.44
SMARCB1-204ENST00000407422 GNAI3P08754 354 aa24.03■■□□□ 1.44
SMARCB1-204ENST00000407422 RASA3Q14644 834 aa24.03■■□□□ 1.44
SMARCB1-204ENST00000407422 NBPF12Q5TAG4 269 aaPredicted RBP24.03■■□□□ 1.44
SMARCB1-204ENST00000407422 CEP126Q9P2H0 1117 aa24.03■■□□□ 1.44
SMARCB1-204ENST00000407422 MKRN3Q13064 507 aaKnown RBP24.02■■□□□ 1.44
SMARCB1-204ENST00000407422 ATP2B3Q16720 1220 aa24.02■■□□□ 1.44
SMARCB1-204ENST00000407422 LDLRAD1Q5T700 205 aa24.02■■□□□ 1.44
SMARCB1-204ENST00000407422 COPRSQ9NQ92 184 aa24.02■■□□□ 1.44
SMARCB1-204ENST00000407422 SAGE1Q9NXZ1 904 aa24.02■■□□□ 1.44
SMARCB1-204ENST00000407422 IL15P40933 162 aaPredicted RBP24.02■■□□□ 1.44
SMARCB1-204ENST00000407422 SRGAP3O43295 1099 aa24.01■■□□□ 1.43
SMARCB1-204ENST00000407422 HDLBPQ00341 1268 aaKnown RBP23.99■■□□□ 1.43
SMARCB1-204ENST00000407422 MAP3K11Q16584 847 aa23.99■■□□□ 1.43
SMARCB1-204ENST00000407422 SUPT20HL1Q3ZLR7 823 aa23.99■■□□□ 1.43
SMARCB1-204ENST00000407422 CDAN1Q8IWY9 1227 aa23.99■■□□□ 1.43
SMARCB1-204ENST00000407422 REM2Q8IYK8 340 aaPredicted RBP23.99■■□□□ 1.43
SMARCB1-204ENST00000407422 ABHD8Q96I13 439 aa23.99■■□□□ 1.43
SMARCB1-204ENST00000407422 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.99■■□□□ 1.43
SMARCB1-204ENST00000407422 TCP10L2B9ZVM9 353 aa23.99■■□□□ 1.43
SMARCB1-204ENST00000407422 PPP1R12BO60237 982 aaPredicted RBP23.99■■□□□ 1.43
SMARCB1-204ENST00000407422 MTX1Q13505 466 aa23.99■■□□□ 1.43
SMARCB1-204ENST00000407422 TEKT1Q969V4 418 aa23.99■■□□□ 1.43
SMARCB1-204ENST00000407422 CLMNQ96JQ2 1002 aa23.99■■□□□ 1.43
SMARCB1-204ENST00000407422 TNFAIP1Q13829 316 aa23.98■■□□□ 1.43
SMARCB1-204ENST00000407422 ZKSCAN2Q63HK3 967 aa23.98■■□□□ 1.43
SMARCB1-204ENST00000407422 TMEM57Q8N5G2 664 aa23.98■■□□□ 1.43
SMARCB1-204ENST00000407422 ADORA1P30542 326 aa23.97■■□□□ 1.43
SMARCB1-204ENST00000407422 CACNB3P54284 484 aa23.97■■□□□ 1.43
SMARCB1-204ENST00000407422 TEPSINQ96N21 525 aa23.97■■□□□ 1.43
SMARCB1-204ENST00000407422 TMEM39BQ9GZU3 492 aa23.97■■□□□ 1.43
SMARCB1-204ENST00000407422 SUGT1Q9Y2Z0 365 aa23.97■■□□□ 1.43
SMARCB1-204ENST00000407422 USP2O75604 605 aaPredicted RBP23.96■■□□□ 1.43
SMARCB1-204ENST00000407422 GNAI2P04899 355 aa23.96■■□□□ 1.43
SMARCB1-204ENST00000407422 PHKA1P46020 1223 aa23.96■■□□□ 1.43
SMARCB1-204ENST00000407422 SPRYD7Q5W111 196 aa23.96■■□□□ 1.43
SMARCB1-204ENST00000407422 WDR66Q8TBY9 1149 aa23.96■■□□□ 1.43
SMARCB1-204ENST00000407422 ZDHHC15Q96MV8 337 aa23.96■■□□□ 1.43
SMARCB1-204ENST00000407422 APOBEC3HQ6NTF7 200 aaKnown RBP23.95■■□□□ 1.43
SMARCB1-204ENST00000407422 SLC10A4Q96EP9 437 aa23.95■■□□□ 1.43
SMARCB1-204ENST00000407422 MRIQ9BWK5 157 aa23.95■■□□□ 1.43
SMARCB1-204ENST00000407422 ZBED9Q6R2W3 1325 aa23.95■■□□□ 1.42
SMARCB1-204ENST00000407422 OTOFQ9HC10 1997 aa23.95■■□□□ 1.42
SMARCB1-204ENST00000407422 TM4SF4P48230 202 aa23.95■■□□□ 1.42
SMARCB1-204ENST00000407422 TIMM10P62072 90 aa23.95■■□□□ 1.42
SMARCB1-204ENST00000407422 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.95■■□□□ 1.42
SMARCB1-204ENST00000407422 MAST3O60307 1309 aa23.94■■□□□ 1.42
SMARCB1-204ENST00000407422 PNMA6EA0A0J9YXQ4 647 aa23.94■■□□□ 1.42
SMARCB1-204ENST00000407422 TFCP2Q12800 502 aa23.94■■□□□ 1.42
SMARCB1-204ENST00000407422 MCOLN1Q9GZU1 580 aa23.94■■□□□ 1.42
SMARCB1-204ENST00000407422 GNL3LQ9NVN8 582 aaKnown RBP23.94■■□□□ 1.42
SMARCB1-204ENST00000407422 IREB2P48200 963 aaKnown RBP23.93■■□□□ 1.42
SMARCB1-204ENST00000407422 CCDC102BQ68D86 513 aa23.93■■□□□ 1.42
SMARCB1-204ENST00000407422 HHIPL2Q6UWX4 724 aa23.93■■□□□ 1.42
SMARCB1-204ENST00000407422 TBC1D8O95759 1140 aa23.92■■□□□ 1.42
SMARCB1-204ENST00000407422 PRDX5P30044 214 aa23.92■■□□□ 1.42
SMARCB1-204ENST00000407422 TNNI2P48788 182 aa23.92■■□□□ 1.42
SMARCB1-204ENST00000407422 DGKZQ13574 1117 aa23.92■■□□□ 1.42
SMARCB1-204ENST00000407422 DIXDC1Q155Q3 683 aa23.92■■□□□ 1.42
SMARCB1-204ENST00000407422 WNK4Q96J92 1243 aa23.92■■□□□ 1.42
SMARCB1-204ENST00000407422 A0A1B0GUL7 405 aa23.91■■□□□ 1.42
SMARCB1-204ENST00000407422 SREBF2Q12772 1141 aa23.91■■□□□ 1.42
SMARCB1-204ENST00000407422 DENND2AQ9ULE3 1009 aa23.91■■□□□ 1.42
SMARCB1-204ENST00000407422 UNCXA6NJT0 531 aa23.9■■□□□ 1.42
SMARCB1-204ENST00000407422 SEMA3EO15041 775 aa23.9■■□□□ 1.42
SMARCB1-204ENST00000407422 RLBP1P12271 317 aa23.9■■□□□ 1.42
SMARCB1-204ENST00000407422 ANKRD13AQ8IZ07 590 aa23.9■■□□□ 1.42
SMARCB1-204ENST00000407422 XAGE2Q96GT9 111 aa23.9■■□□□ 1.42
SMARCB1-204ENST00000407422 DAGLAQ9Y4D2 1042 aa23.9■■□□□ 1.42
SMARCB1-204ENST00000407422 GJA5P36382 358 aa23.89■■□□□ 1.42
SMARCB1-204ENST00000407422 TMOD2Q9NZR1 351 aa23.89■■□□□ 1.42
SMARCB1-204ENST00000407422 LAMB1P07942 1786 aa23.89■■□□□ 1.42
SMARCB1-204ENST00000407422 LDHBP07195 334 aaKnown RBP23.88■■□□□ 1.41
SMARCB1-204ENST00000407422 ZBTB48P10074 688 aaPredicted RBP23.88■■□□□ 1.41
SMARCB1-204ENST00000407422 RASGRF1Q13972 1273 aa23.88■■□□□ 1.41
SMARCB1-204ENST00000407422 FTSJ3Q8IY81 847 aaKnown RBP23.88■■□□□ 1.41
SMARCB1-204ENST00000407422 C1orf115Q9H7X2 142 aa23.88■■□□□ 1.41
SMARCB1-204ENST00000407422 AKAP2Q9Y2D5 859 aa23.88■■□□□ 1.41
SMARCB1-204ENST00000407422 SALL1Q9NSC2 1324 aa23.88■■□□□ 1.41
SMARCB1-204ENST00000407422 CCDC85CA6NKD9 419 aa23.88■■□□□ 1.41
SMARCB1-204ENST00000407422 FKBP1CQ5VVH2 108 aa23.88■■□□□ 1.41
SMARCB1-204ENST00000407422 MYH2Q9UKX2 1941 aa23.87■■□□□ 1.41
SMARCB1-204ENST00000407422 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.87■■□□□ 1.41
SMARCB1-204ENST00000407422 FAM83AQ86UY5 434 aa23.87■■□□□ 1.41
SMARCB1-204ENST00000407422 NEUROD6Q96NK8 337 aa23.87■■□□□ 1.41
SMARCB1-204ENST00000407422 R3HDMLQ9H3Y0 253 aa23.87■■□□□ 1.41
SMARCB1-204ENST00000407422 ELP3Q9H9T3 547 aa23.87■■□□□ 1.41
SMARCB1-204ENST00000407422 MANSC4A6NHS7 340 aaPredicted RBP23.86■■□□□ 1.41
SMARCB1-204ENST00000407422 ZBTB22O15209 634 aa23.86■■□□□ 1.41
SMARCB1-204ENST00000407422 G3BP1Q13283 466 aaKnown RBP eCLIP23.86■■□□□ 1.414e-6■■□□□ 12.1
SMARCB1-204ENST00000407422 ITPRIPQ8IWB1 547 aa23.86■■□□□ 1.41
SMARCB1-204ENST00000407422 AK9Q5TCS8 1911 aa23.85■■□□□ 1.41
SMARCB1-204ENST00000407422 CDC42EP5Q6NZY7 148 aa23.85■■□□□ 1.41
SMARCB1-204ENST00000407422 ZNF296Q8WUU4 475 aaPredicted RBP23.85■■□□□ 1.41
SMARCB1-204ENST00000407422 VGLL4Q14135 290 aa23.84■■□□□ 1.41
SMARCB1-204ENST00000407422 POLA2Q14181 598 aa23.84■■□□□ 1.41
SMARCB1-204ENST00000407422 MVPQ14764 893 aaKnown RBP23.84■■□□□ 1.41
SMARCB1-204ENST00000407422 IFNL1Q8IU54 200 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms