RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 G3V3G9 751 aa15.52■□□□□ 0.08
SMARCB1-203ENST00000407082 HIP1O00291 1037 aa15.52■□□□□ 0.08
SMARCB1-203ENST00000407082 G3BP1Q13283 466 aaKnown RBP eCLIP15.52■□□□□ 0.084e-6■■□□□ 12.1
SMARCB1-203ENST00000407082 DCAF8Q5TAQ9 597 aa15.52■□□□□ 0.08
SMARCB1-203ENST00000407082 REM2Q8IYK8 340 aaPredicted RBP15.52■□□□□ 0.08
SMARCB1-203ENST00000407082 ZNF296Q8WUU4 475 aaPredicted RBP15.52■□□□□ 0.08
SMARCB1-203ENST00000407082 GREM2Q9H772 168 aa15.52■□□□□ 0.08
SMARCB1-203ENST00000407082 CHMP3Q9Y3E7 222 aa15.52■□□□□ 0.08
SMARCB1-203ENST00000407082 ASTN2O75129 1339 aaPredicted RBP15.51■□□□□ 0.07
SMARCB1-203ENST00000407082 ECE2O60344 883 aa15.51■□□□□ 0.07
SMARCB1-203ENST00000407082 CLEC17AQ6ZS10 378 aa15.51■□□□□ 0.07
SMARCB1-203ENST00000407082 KIAA1211Q6ZU35 1233 aa15.51■□□□□ 0.07
SMARCB1-203ENST00000407082 RASAL3Q86YV0 1011 aa15.51■□□□□ 0.07
SMARCB1-203ENST00000407082 IL17RAQ96F46 866 aa15.51■□□□□ 0.07
SMARCB1-203ENST00000407082 SEC31BQ9NQW1 1179 aa15.51■□□□□ 0.07
SMARCB1-203ENST00000407082 LAMB2P55268 1798 aa15.51■□□□□ 0.07
SMARCB1-203ENST00000407082 IFIT2P09913 472 aaKnown RBP15.5■□□□□ 0.07
SMARCB1-203ENST00000407082 ITGA6P23229 1130 aa15.5■□□□□ 0.07
SMARCB1-203ENST00000407082 RPS12P25398 132 aaKnown RBP15.5■□□□□ 0.07
SMARCB1-203ENST00000407082 CCDC57Q2TAC2 916 aa15.5■□□□□ 0.07
SMARCB1-203ENST00000407082 RABL6Q3YEC7 729 aaPredicted RBP15.5■□□□□ 0.07
SMARCB1-203ENST00000407082 MYH3P11055 1940 aa15.49■□□□□ 0.07
SMARCB1-203ENST00000407082 TRAK2O60296 914 aa15.49■□□□□ 0.07
SMARCB1-203ENST00000407082 MKRN3Q13064 507 aaKnown RBP15.49■□□□□ 0.07
SMARCB1-203ENST00000407082 IFIT5Q13325 482 aaKnown RBP15.49■□□□□ 0.07
SMARCB1-203ENST00000407082 TTLL12Q14166 644 aaPredicted RBP15.49■□□□□ 0.07
SMARCB1-203ENST00000407082 HABP4Q5JVS0 413 aaKnown RBP15.49■□□□□ 0.07
SMARCB1-203ENST00000407082 ANGEL2Q5VTE6 544 aaKnown RBP15.49■□□□□ 0.07
SMARCB1-203ENST00000407082 MOB2Q70IA6 237 aa15.49■□□□□ 0.07
SMARCB1-203ENST00000407082 TMC4Q7Z404 712 aa15.49■□□□□ 0.07
SMARCB1-203ENST00000407082 ANKRD18BA2A2Z9 1011 aa15.48■□□□□ 0.07
SMARCB1-203ENST00000407082 UBE2Q2LH0YL09 131 aa15.48■□□□□ 0.07
SMARCB1-203ENST00000407082 RPS8P62241 208 aaKnown RBP15.48■□□□□ 0.07
SMARCB1-203ENST00000407082 GPSM2P81274 684 aa15.48■□□□□ 0.07
SMARCB1-203ENST00000407082 SCARF1Q14162 830 aa15.48■□□□□ 0.07
SMARCB1-203ENST00000407082 POTEDQ86YR6 584 aa15.48■□□□□ 0.07
SMARCB1-203ENST00000407082 CELF1Q92879 486 aaKnown RBP15.48■□□□□ 0.07
SMARCB1-203ENST00000407082 TNPO1Q92973 898 aaKnown RBP15.48■□□□□ 0.07
SMARCB1-203ENST00000407082 CDC5LQ99459 802 aaKnown RBP15.48■□□□□ 0.07
SMARCB1-203ENST00000407082 EYA3Q99504 573 aa15.48■□□□□ 0.07
SMARCB1-203ENST00000407082 IL1RAPL2Q9NP60 686 aa15.48■□□□□ 0.07
SMARCB1-203ENST00000407082 ANO2Q9NQ90 1003 aa15.48■□□□□ 0.07
SMARCB1-203ENST00000407082 ECHDC1Q9NTX5 307 aa15.48■□□□□ 0.07
SMARCB1-203ENST00000407082 POLLQ9UGP5 575 aa15.48■□□□□ 0.07
SMARCB1-203ENST00000407082 SCAF8Q9UPN6 1271 aaKnown RBP15.48■□□□□ 0.07
SMARCB1-203ENST00000407082 TAF1P21675 1872 aa15.48■□□□□ 0.07
SMARCB1-203ENST00000407082 RTL9Q8NET4 1388 aa15.48■□□□□ 0.07
SMARCB1-203ENST00000407082 TAF7LQ5H9L4 462 aa15.47■□□□□ 0.07
SMARCB1-203ENST00000407082 FBXO46Q6PJ61 603 aaPredicted RBP15.47■□□□□ 0.07
SMARCB1-203ENST00000407082 ANKRD18AQ8IVF6 992 aa15.47■□□□□ 0.07
SMARCB1-203ENST00000407082 ZC3H12CQ9C0D7 883 aaKnown RBP15.47■□□□□ 0.07
SMARCB1-203ENST00000407082 GPR25O00155 361 aa15.46■□□□□ 0.07
SMARCB1-203ENST00000407082 PI4K2BQ8TCG2 481 aa15.46■□□□□ 0.07
SMARCB1-203ENST00000407082 EVI5LQ96CN4 794 aa15.46■□□□□ 0.07
SMARCB1-203ENST00000407082 GOLGA6L3A6NEY3 463 aa15.45■□□□□ 0.06
SMARCB1-203ENST00000407082 IGHMBP2P38935 993 aaKnown RBP15.45■□□□□ 0.06
SMARCB1-203ENST00000407082 NEK4P51957 841 aa15.45■□□□□ 0.06
SMARCB1-203ENST00000407082 PRAMEF18Q5VWM3 479 aa15.45■□□□□ 0.06
SMARCB1-203ENST00000407082 INTS4Q96HW7 963 aaKnown RBP15.45■□□□□ 0.06
SMARCB1-203ENST00000407082 ZNF594Q96JF6 807 aaPredicted RBP15.45■□□□□ 0.06
SMARCB1-203ENST00000407082 MPHOSPH8Q99549 860 aa15.45■□□□□ 0.06
SMARCB1-203ENST00000407082 DIAPH3Q9NSV4 1193 aa15.45■□□□□ 0.06
SMARCB1-203ENST00000407082 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.45■□□□□ 0.06
SMARCB1-203ENST00000407082 VIL1P09327 827 aaKnown RBP15.44■□□□□ 0.06
SMARCB1-203ENST00000407082 FKBP1BP68106 108 aa15.44■□□□□ 0.06
SMARCB1-203ENST00000407082 TICAM2Q86XR7 235 aa15.44■□□□□ 0.06
SMARCB1-203ENST00000407082 BSDC1Q9NW68 430 aaPredicted RBP15.44■□□□□ 0.06
SMARCB1-203ENST00000407082 DUOX1Q9NRD9 1551 aa15.44■□□□□ 0.06
SMARCB1-203ENST00000407082 SGSM2O43147 1006 aa15.43■□□□□ 0.06
SMARCB1-203ENST00000407082 FKTNO75072 461 aa15.43■□□□□ 0.06
SMARCB1-203ENST00000407082 CD2BP2O95400 341 aaKnown RBP15.43■□□□□ 0.06
SMARCB1-203ENST00000407082 HSPA4P34932 840 aa15.43■□□□□ 0.06
SMARCB1-203ENST00000407082 LDHAL6AQ6ZMR3 332 aa15.43■□□□□ 0.06
SMARCB1-203ENST00000407082 KLHDC4Q8TBB5 520 aa15.43■□□□□ 0.06
SMARCB1-203ENST00000407082 TBC1D16Q8TBP0 767 aa15.43■□□□□ 0.06
SMARCB1-203ENST00000407082 ANKIB1Q9P2G1 1089 aa15.43■□□□□ 0.06
SMARCB1-203ENST00000407082 RAD50Q92878 1312 aa15.43■□□□□ 0.06
SMARCB1-203ENST00000407082 PDIA4P13667 645 aaKnown RBP15.42■□□□□ 0.06
SMARCB1-203ENST00000407082 RFX5P48382 616 aaPredicted RBP15.42■□□□□ 0.06
SMARCB1-203ENST00000407082 COL4A1P02462 1669 aa15.41■□□□□ 0.06
SMARCB1-203ENST00000407082 UFL1O94874 794 aa15.41■□□□□ 0.06
SMARCB1-203ENST00000407082 TM4SF4P48230 202 aa15.41■□□□□ 0.06
SMARCB1-203ENST00000407082 PTPN12Q05209 780 aaKnown RBP15.41■□□□□ 0.06
SMARCB1-203ENST00000407082 PRKG1Q13976 671 aa15.41■□□□□ 0.06
SMARCB1-203ENST00000407082 RSBN1LQ6PCB5 846 aaPredicted RBP15.41■□□□□ 0.06
SMARCB1-203ENST00000407082 AACSQ86V21 672 aa15.41■□□□□ 0.06
SMARCB1-203ENST00000407082 PUS3Q9BZE2 481 aaKnown RBP15.41■□□□□ 0.06
SMARCB1-203ENST00000407082 R3HDMLQ9H3Y0 253 aa15.41■□□□□ 0.06
SMARCB1-203ENST00000407082 MYOZ2Q9NPC6 264 aa15.41■□□□□ 0.06
SMARCB1-203ENST00000407082 COPRSQ9NQ92 184 aa15.41■□□□□ 0.06
SMARCB1-203ENST00000407082 CNNM1Q9NRU3 951 aa15.41■□□□□ 0.06
SMARCB1-203ENST00000407082 MINPP1Q9UNW1 487 aa15.41■□□□□ 0.06
SMARCB1-203ENST00000407082 USP17L8P0C7I0 530 aa15.4■□□□□ 0.06
SMARCB1-203ENST00000407082 NF2P35240 595 aa15.4■□□□□ 0.06
SMARCB1-203ENST00000407082 MRE11P49959 708 aa15.4■□□□□ 0.06
SMARCB1-203ENST00000407082 SREBF2Q12772 1141 aa15.4■□□□□ 0.06
SMARCB1-203ENST00000407082 CUL4AQ13619 759 aa15.4■□□□□ 0.06
SMARCB1-203ENST00000407082 TSHZ3Q63HK5 1081 aa15.4■□□□□ 0.06
SMARCB1-203ENST00000407082 SIL1Q9H173 461 aa15.4■□□□□ 0.06
SMARCB1-203ENST00000407082 FOXD4L1Q9NU39 408 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms