RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 THSD7BQ9C0I4 1608 aa10.24□□□□□ -0.77
GPC3-203ENST00000406757 YDJCA8MPS7 323 aa10.23□□□□□ -0.77
GPC3-203ENST00000406757 C6orf229H3BNL8 230 aa10.23□□□□□ -0.77
GPC3-203ENST00000406757 RIMBP2O15034 1052 aa10.23□□□□□ -0.77
GPC3-203ENST00000406757 MAP4K4O95819 1239 aaPredicted RBP10.23□□□□□ -0.77
GPC3-203ENST00000406757 FGFR2P21802 821 aa10.23□□□□□ -0.77
GPC3-203ENST00000406757 TNIP1Q15025 636 aa10.23□□□□□ -0.77
GPC3-203ENST00000406757 SAPCD2Q86UD0 394 aa10.23□□□□□ -0.77
GPC3-203ENST00000406757 TXNRD3Q86VQ6 643 aa10.23□□□□□ -0.77
GPC3-203ENST00000406757 TRPM4Q8TD43 1214 aa10.23□□□□□ -0.77
GPC3-203ENST00000406757 FAM163AQ96GL9 167 aaPredicted RBP10.23□□□□□ -0.77
GPC3-203ENST00000406757 XAGE2Q96GT9 111 aa10.23□□□□□ -0.77
GPC3-203ENST00000406757 ANKRD2Q9GZV1 360 aa10.23□□□□□ -0.77
GPC3-203ENST00000406757 POLLQ9UGP5 575 aa10.23□□□□□ -0.77
GPC3-203ENST00000406757 AKAP2Q9Y2D5 859 aa10.23□□□□□ -0.77
GPC3-203ENST00000406757 NDUFB9Q9Y6M9 179 aa10.23□□□□□ -0.77
GPC3-203ENST00000406757 UFL1O94874 794 aa10.22□□□□□ -0.77
GPC3-203ENST00000406757 SLC5A1P13866 664 aa10.22□□□□□ -0.77
GPC3-203ENST00000406757 GYG1P46976 350 aa10.22□□□□□ -0.77
GPC3-203ENST00000406757 BCAMP50895 628 aa10.22□□□□□ -0.77
GPC3-203ENST00000406757 PUM3Q15397 648 aaKnown RBP10.22□□□□□ -0.77
GPC3-203ENST00000406757 GORABQ5T7V8 394 aa10.22□□□□□ -0.77
GPC3-203ENST00000406757 TBC1D16Q8TBP0 767 aa10.22□□□□□ -0.77
GPC3-203ENST00000406757 GPR108Q9NPR9 543 aa10.22□□□□□ -0.77
GPC3-203ENST00000406757 PGAP2Q9UHJ9 254 aa10.22□□□□□ -0.77
GPC3-203ENST00000406757 CNOT7Q9UIV1 285 aaKnown RBP10.22□□□□□ -0.77
GPC3-203ENST00000406757 IQSEC3Q9UPP2 1182 aaPredicted RBP10.22□□□□□ -0.77
GPC3-203ENST00000406757 COLQQ9Y215 455 aaPredicted RBP10.22□□□□□ -0.77
GPC3-203ENST00000406757 ZNF804BA4D1E1 1349 aa10.22□□□□□ -0.77
GPC3-203ENST00000406757 ZNF609O15014 1411 aa10.22□□□□□ -0.77
GPC3-203ENST00000406757 DUOX1Q9NRD9 1551 aa10.22□□□□□ -0.77
GPC3-203ENST00000406757 TRPM7Q96QT4 1865 aa10.21□□□□□ -0.77
GPC3-203ENST00000406757 CCDC85CA6NKD9 419 aa10.21□□□□□ -0.77
GPC3-203ENST00000406757 H7C1D1 291 aa10.21□□□□□ -0.77
GPC3-203ENST00000406757 IFIT1P09914 478 aaKnown RBP10.21□□□□□ -0.77
GPC3-203ENST00000406757 MX1P20591 662 aa10.21□□□□□ -0.77
GPC3-203ENST00000406757 ATP2B4P23634 1241 aa10.21□□□□□ -0.77
GPC3-203ENST00000406757 MAP2K2P36507 400 aa10.21□□□□□ -0.77
GPC3-203ENST00000406757 PHKA1P46020 1223 aa10.21□□□□□ -0.77
GPC3-203ENST00000406757 PDE1AP54750 535 aa10.21□□□□□ -0.77
GPC3-203ENST00000406757 DLK2Q6UY11 383 aa10.21□□□□□ -0.77
GPC3-203ENST00000406757 CDC37L1Q7L3B6 337 aa10.21□□□□□ -0.77
GPC3-203ENST00000406757 MICALL2Q8IY33 904 aa10.21□□□□□ -0.77
GPC3-203ENST00000406757 PLCD3Q8N3E9 789 aa10.21□□□□□ -0.77
GPC3-203ENST00000406757 LPIN2Q92539 896 aa10.21□□□□□ -0.77
GPC3-203ENST00000406757 BOLA2Q9H3K6 86 aa10.21□□□□□ -0.77
GPC3-203ENST00000406757 DBNDD1Q9H9R9 158 aa10.21□□□□□ -0.77
GPC3-203ENST00000406757 SNRKQ9NRH2 765 aa10.21□□□□□ -0.77
GPC3-203ENST00000406757 GGA1Q9UJY5 639 aa10.21□□□□□ -0.77
GPC3-203ENST00000406757 XDHP47989 1333 aa10.21□□□□□ -0.78
GPC3-203ENST00000406757 SALL3Q9BXA9 1300 aa10.21□□□□□ -0.78
GPC3-203ENST00000406757 A0A1B0GUL6 1792 aa10.2□□□□□ -0.78
GPC3-203ENST00000406757 PSMD14O00487 310 aa10.2□□□□□ -0.78
GPC3-203ENST00000406757 UBE4AQ14139 1066 aa10.2□□□□□ -0.78
GPC3-203ENST00000406757 SCARF1Q14162 830 aa10.2□□□□□ -0.78
GPC3-203ENST00000406757 DOK7Q18PE1 504 aa10.2□□□□□ -0.78
GPC3-203ENST00000406757 WASHC4Q2M389 1173 aa10.2□□□□□ -0.78
GPC3-203ENST00000406757 TTC39AQ5SRH9 613 aa10.2□□□□□ -0.78
GPC3-203ENST00000406757 SAMD7Q7Z3H4 446 aa10.2□□□□□ -0.78
GPC3-203ENST00000406757 TMC4Q7Z404 712 aa10.2□□□□□ -0.78
GPC3-203ENST00000406757 USP48Q86UV5 1035 aa10.2□□□□□ -0.78
GPC3-203ENST00000406757 ZC3H15Q8WU90 426 aaKnown RBP10.2□□□□□ -0.78
GPC3-203ENST00000406757 ECHDC1Q9NTX5 307 aa10.2□□□□□ -0.78
GPC3-203ENST00000406757 JAG2Q9Y219 1238 aa10.2□□□□□ -0.78
GPC3-203ENST00000406757 LEMD3Q9Y2U8 911 aa10.2□□□□□ -0.78
GPC3-203ENST00000406757 EGFRP00533 1210 aa10.19□□□□□ -0.78
GPC3-203ENST00000406757 TBC1D10BQ4KMP7 808 aaPredicted RBP10.19□□□□□ -0.78
GPC3-203ENST00000406757 CCDC158Q5M9N0 1113 aa10.19□□□□□ -0.78
GPC3-203ENST00000406757 CCDC102BQ68D86 513 aa10.19□□□□□ -0.78
GPC3-203ENST00000406757 PI16Q6UXB8 463 aa10.19□□□□□ -0.78
GPC3-203ENST00000406757 PI4K2BQ8TCG2 481 aa10.19□□□□□ -0.78
GPC3-203ENST00000406757 EDC3Q96F86 508 aaKnown RBP10.19□□□□□ -0.78
GPC3-203ENST00000406757 HHIPL1Q96JK4 782 aa10.19□□□□□ -0.78
GPC3-203ENST00000406757 FAM84BQ96KN1 310 aaPredicted RBP10.19□□□□□ -0.78
GPC3-203ENST00000406757 ZIC5Q96T25 663 aa10.19□□□□□ -0.78
GPC3-203ENST00000406757 KCNQ5Q9NR82 932 aa10.19□□□□□ -0.78
GPC3-203ENST00000406757 PODXL2Q9NZ53 605 aa10.19□□□□□ -0.78
GPC3-203ENST00000406757 STAP2Q9UGK3 403 aa10.19□□□□□ -0.78
GPC3-203ENST00000406757 LRRC37AA6NMS7 1700 aa10.19□□□□□ -0.78
GPC3-203ENST00000406757 IRS2Q9Y4H2 1338 aa10.18□□□□□ -0.78
GPC3-203ENST00000406757 ECE2O60344 883 aa10.18□□□□□ -0.78
GPC3-203ENST00000406757 SEC24BO95487 1268 aa10.18□□□□□ -0.78
GPC3-203ENST00000406757 GSPT1P15170 499 aaKnown RBP10.18□□□□□ -0.78
GPC3-203ENST00000406757 HIBADHP31937 336 aaKnown RBP10.18□□□□□ -0.78
GPC3-203ENST00000406757 NUBP1P53384 320 aa10.18□□□□□ -0.78
GPC3-203ENST00000406757 HUNKP57058 714 aa10.18□□□□□ -0.78
GPC3-203ENST00000406757 RBM26Q5T8P6 1007 aaKnown RBP10.18□□□□□ -0.78
GPC3-203ENST00000406757 IER5LQ5T953 404 aa10.18□□□□□ -0.78
GPC3-203ENST00000406757 TTC22Q5TAA0 569 aa10.18□□□□□ -0.78
GPC3-203ENST00000406757 VPS37DQ86XT2 251 aa10.18□□□□□ -0.78
GPC3-203ENST00000406757 DNAJC2Q99543 621 aaKnown RBP10.18□□□□□ -0.78
GPC3-203ENST00000406757 PCDHB13Q9Y5F0 798 aa10.18□□□□□ -0.78
GPC3-203ENST00000406757 TRIM6-TRIM34B2RNG4 842 aa10.17□□□□□ -0.78
GPC3-203ENST00000406757 ADM5C9JUS6 153 aa10.17□□□□□ -0.78
GPC3-203ENST00000406757 CA12O43570 354 aa10.17□□□□□ -0.78
GPC3-203ENST00000406757 ATP5JP18859 108 aa10.17□□□□□ -0.78
GPC3-203ENST00000406757 MCAMP43121 646 aa10.17□□□□□ -0.78
GPC3-203ENST00000406757 CHAF1AQ13111 956 aaPredicted RBP10.17□□□□□ -0.78
GPC3-203ENST00000406757 CAVIN4Q5BKX8 364 aa10.17□□□□□ -0.78
GPC3-203ENST00000406757 KRT26Q7Z3Y9 468 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms