RNA–Protein interactions for RNA: ENST00000404319.1

NIP7P3-201, Transcript of NIP7, nucleolar pre-rRNA processing protein pseudogene 3, humanhuman

BASIC

Gene NIP7P3, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7P3-201ENST00000404319 HTATIP2Q9BUP3 242 aa11.21□□□□□ -0.61
NIP7P3-201ENST00000404319 TTF2Q9UNY4 1162 aaKnown RBP11.21□□□□□ -0.61
NIP7P3-201ENST00000404319 NR2E3Q9Y5X4 410 aa11.21□□□□□ -0.61
NIP7P3-201ENST00000404319 FAM205AQ6ZU69 1335 aa11.2□□□□□ -0.62
NIP7P3-201ENST00000404319 HIBADHP31937 336 aaKnown RBP11.2□□□□□ -0.62
NIP7P3-201ENST00000404319 LACTBP83111 547 aaPredicted RBP11.2□□□□□ -0.62
NIP7P3-201ENST00000404319 SNAPC2Q13487 334 aa11.2□□□□□ -0.62
NIP7P3-201ENST00000404319 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.2□□□□□ -0.62
NIP7P3-201ENST00000404319 VPS37DQ86XT2 251 aa11.2□□□□□ -0.62
NIP7P3-201ENST00000404319 ERO1BQ86YB8 467 aa11.2□□□□□ -0.62
NIP7P3-201ENST00000404319 DZIP1LQ8IYY4 767 aaKnown RBP11.2□□□□□ -0.62
NIP7P3-201ENST00000404319 DNAAF4Q8WXU2 420 aa11.2□□□□□ -0.62
NIP7P3-201ENST00000404319 BRI3BPQ8WY22 251 aa11.2□□□□□ -0.62
NIP7P3-201ENST00000404319 OTUD5Q96G74 571 aa11.2□□□□□ -0.62
NIP7P3-201ENST00000404319 CNNM1Q9NRU3 951 aa11.2□□□□□ -0.62
NIP7P3-201ENST00000404319 TMOD2Q9NZR1 351 aa11.2□□□□□ -0.62
NIP7P3-201ENST00000404319 TCP10L2B9ZVM9 353 aa11.19□□□□□ -0.62
NIP7P3-201ENST00000404319 FRAT2O75474 233 aaPredicted RBP11.19□□□□□ -0.62
NIP7P3-201ENST00000404319 HDLBPQ00341 1268 aaKnown RBP11.19□□□□□ -0.62
NIP7P3-201ENST00000404319 FLIIQ13045 1269 aa11.19□□□□□ -0.62
NIP7P3-201ENST00000404319 VGLL4Q14135 290 aa11.19□□□□□ -0.62
NIP7P3-201ENST00000404319 UBE4AQ14139 1066 aa11.19□□□□□ -0.62
NIP7P3-201ENST00000404319 DCAF15Q66K64 600 aa11.19□□□□□ -0.62
NIP7P3-201ENST00000404319 TSPYL6Q8N831 410 aa11.19□□□□□ -0.62
NIP7P3-201ENST00000404319 RAET1EQ8TD07 263 aa11.19□□□□□ -0.62
NIP7P3-201ENST00000404319 TBC1D22AQ8WUA7 517 aa11.19□□□□□ -0.62
NIP7P3-201ENST00000404319 MRIQ9BWK5 157 aa11.19□□□□□ -0.62
NIP7P3-201ENST00000404319 TDRD3Q9H7E2 651 aaKnown RBP11.19□□□□□ -0.62
NIP7P3-201ENST00000404319 BIN2Q9UBW5 565 aaPredicted RBP11.19□□□□□ -0.62
NIP7P3-201ENST00000404319 MYCP01106 439 aaPredicted RBP11.18□□□□□ -0.62
NIP7P3-201ENST00000404319 CASP7P55210 303 aa11.18□□□□□ -0.62
NIP7P3-201ENST00000404319 UBXN2AP68543 259 aa11.18□□□□□ -0.62
NIP7P3-201ENST00000404319 CAVIN4Q5BKX8 364 aa11.18□□□□□ -0.62
NIP7P3-201ENST00000404319 SLC17A8Q8NDX2 589 aa11.18□□□□□ -0.62
NIP7P3-201ENST00000404319 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.18□□□□□ -0.62
NIP7P3-201ENST00000404319 TDRD7Q8NHU6 1098 aaKnown RBP11.18□□□□□ -0.62
NIP7P3-201ENST00000404319 SH3TC2Q8TF17 1288 aa11.18□□□□□ -0.62
NIP7P3-201ENST00000404319 TRIM47Q96LD4 638 aa11.18□□□□□ -0.62
NIP7P3-201ENST00000404319 PCDHAC2Q9Y5I4 1007 aa11.18□□□□□ -0.62
NIP7P3-201ENST00000404319 ECM29Q5VYK3 1845 aa11.18□□□□□ -0.62
NIP7P3-201ENST00000404319 SPEF2Q9C093 1822 aa11.18□□□□□ -0.62
NIP7P3-201ENST00000404319 SSC5DA1L4H1 1573 aa11.17□□□□□ -0.62
NIP7P3-201ENST00000404319 SPDYE5A6NIY4 337 aa11.17□□□□□ -0.62
NIP7P3-201ENST00000404319 SNAP23O00161 211 aa11.17□□□□□ -0.62
NIP7P3-201ENST00000404319 FMNL1O95466 1100 aaPredicted RBP11.17□□□□□ -0.62
NIP7P3-201ENST00000404319 CRKP46108 304 aa11.17□□□□□ -0.62
NIP7P3-201ENST00000404319 FOXO4P98177 505 aa11.17□□□□□ -0.62
NIP7P3-201ENST00000404319 PPATQ06203 517 aa11.17□□□□□ -0.62
NIP7P3-201ENST00000404319 PPIL2Q13356 520 aa11.17□□□□□ -0.62
NIP7P3-201ENST00000404319 FKBP1CQ5VVH2 108 aa11.17□□□□□ -0.62
NIP7P3-201ENST00000404319 LMBR1LQ6UX01 489 aa11.17□□□□□ -0.62
NIP7P3-201ENST00000404319 CHRDL2Q6WN34 429 aa11.17□□□□□ -0.62
NIP7P3-201ENST00000404319 G2E3Q7L622 706 aa11.17□□□□□ -0.62
NIP7P3-201ENST00000404319 FAM43AQ8N2R8 423 aa11.17□□□□□ -0.62
NIP7P3-201ENST00000404319 TEKT1Q969V4 418 aa11.17□□□□□ -0.62
NIP7P3-201ENST00000404319 TEPSINQ96N21 525 aa11.17□□□□□ -0.62
NIP7P3-201ENST00000404319 TMEM39BQ9GZU3 492 aa11.17□□□□□ -0.62
NIP7P3-201ENST00000404319 C9orf78Q9NZ63 289 aaPredicted RBP11.17□□□□□ -0.62
NIP7P3-201ENST00000404319 JAG2Q9Y219 1238 aa11.17□□□□□ -0.62
NIP7P3-201ENST00000404319 LAMB1P07942 1786 aa11.16□□□□□ -0.62
NIP7P3-201ENST00000404319 IRS2Q9Y4H2 1338 aa11.16□□□□□ -0.62
NIP7P3-201ENST00000404319 BRCA2P51587 3418 aa11.16□□□□□ -0.62
NIP7P3-201ENST00000404319 BTBD19C9JJ37 291 aa11.16□□□□□ -0.62
NIP7P3-201ENST00000404319 GRK4P32298 578 aa11.16□□□□□ -0.62
NIP7P3-201ENST00000404319 PSMC4P43686 418 aa11.16□□□□□ -0.62
NIP7P3-201ENST00000404319 CCDC27Q2M243 656 aa11.16□□□□□ -0.62
NIP7P3-201ENST00000404319 FAM83AQ86UY5 434 aa11.16□□□□□ -0.62
NIP7P3-201ENST00000404319 TSR2Q969E8 191 aaKnown RBP11.16□□□□□ -0.62
NIP7P3-201ENST00000404319 WRNIP1Q96S55 665 aa11.16□□□□□ -0.62
NIP7P3-201ENST00000404319 SRRDQ9UH36 339 aa11.16□□□□□ -0.62
NIP7P3-201ENST00000404319 MAST3O60307 1309 aa11.15□□□□□ -0.62
NIP7P3-201ENST00000404319 IL16Q14005 1332 aa11.15□□□□□ -0.62
NIP7P3-201ENST00000404319 ZNF646O15015 1829 aaPredicted RBP11.15□□□□□ -0.62
NIP7P3-201ENST00000404319 A0A1W2PPC1 479 aa11.15□□□□□ -0.62
NIP7P3-201ENST00000404319 DLL1O00548 723 aa11.15□□□□□ -0.62
NIP7P3-201ENST00000404319 GJB1P08034 283 aa11.15□□□□□ -0.62
NIP7P3-201ENST00000404319 GJA8P48165 433 aa11.15□□□□□ -0.62
NIP7P3-201ENST00000404319 ANKRD23Q86SG2 305 aa11.15□□□□□ -0.62
NIP7P3-201ENST00000404319 FAM84BQ96KN1 310 aaPredicted RBP11.15□□□□□ -0.62
NIP7P3-201ENST00000404319 RNF208Q9H0X6 261 aa11.15□□□□□ -0.62
NIP7P3-201ENST00000404319 RBM27Q9P2N5 1060 aaKnown RBP11.15□□□□□ -0.62
NIP7P3-201ENST00000404319 SUGT1Q9Y2Z0 365 aa11.15□□□□□ -0.62
NIP7P3-201ENST00000404319 MROH5Q6ZUA9 1318 aa11.14□□□□□ -0.63
NIP7P3-201ENST00000404319 CEP290O15078 2479 aa11.14□□□□□ -0.63
NIP7P3-201ENST00000404319 IRF6O14896 467 aa11.14□□□□□ -0.63
NIP7P3-201ENST00000404319 GYG1P46976 350 aa11.14□□□□□ -0.63
NIP7P3-201ENST00000404319 CAP1Q01518 475 aa11.14□□□□□ -0.63
NIP7P3-201ENST00000404319 C17orf99Q6UX52 265 aa11.14□□□□□ -0.63
NIP7P3-201ENST00000404319 ZKSCAN4Q969J2 545 aaPredicted RBP11.14□□□□□ -0.63
NIP7P3-201ENST00000404319 ZDHHC15Q96MV8 337 aa11.14□□□□□ -0.63
NIP7P3-201ENST00000404319 ZNF341Q9BYN7 854 aa11.14□□□□□ -0.63
NIP7P3-201ENST00000404319 PRKRIP1Q9H875 184 aaPredicted RBP11.14□□□□□ -0.63
NIP7P3-201ENST00000404319 RIPOR2Q9Y4F9 1068 aa11.14□□□□□ -0.63
NIP7P3-201ENST00000404319 GRM8O00222 908 aa11.13□□□□□ -0.63
NIP7P3-201ENST00000404319 CCL5P13501 91 aa11.13□□□□□ -0.63
NIP7P3-201ENST00000404319 FCGRTP55899 365 aa11.13□□□□□ -0.63
NIP7P3-201ENST00000404319 WWC1Q8IX03 1113 aa11.13□□□□□ -0.63
NIP7P3-201ENST00000404319 SLAIN1Q8ND83 568 aa11.13□□□□□ -0.63
NIP7P3-201ENST00000404319 ZNF594Q96JF6 807 aaPredicted RBP11.13□□□□□ -0.63
NIP7P3-201ENST00000404319 ARHGAP39Q9C0H5 1083 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms