RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 AOX1Q06278 1338 aa35.73■■■■□ 3.31
USP42-202ENST00000404008 ZNF784Q8NCA9 323 aaPredicted RBP35.72■■■■□ 3.31
USP42-202ENST00000404008 OSBPL3Q9H4L5 887 aa35.72■■■■□ 3.31
USP42-202ENST00000404008 ANTXR1Q9H6X2 564 aa35.72■■■■□ 3.31
USP42-202ENST00000404008 PIH1D3Q9NQM4 214 aaKnown RBP35.72■■■■□ 3.31
USP42-202ENST00000404008 HDAC9Q9UKV0 1011 aa35.72■■■■□ 3.31
USP42-202ENST00000404008 EPHX2P34913 555 aa35.71■■■■□ 3.31
USP42-202ENST00000404008 TAF1DQ9H5J8 278 aaPredicted RBP35.71■■■■□ 3.31
USP42-202ENST00000404008 ADARB2Q9NS39 739 aaKnown RBP35.71■■■■□ 3.31
USP42-202ENST00000404008 PAG1Q9NWQ8 432 aa35.71■■■■□ 3.31
USP42-202ENST00000404008 MAST3O60307 1309 aa35.71■■■■□ 3.31
USP42-202ENST00000404008 MYH2Q9UKX2 1941 aa35.7■■■■□ 3.31
USP42-202ENST00000404008 GOLIM4O00461 696 aa35.7■■■■□ 3.31
USP42-202ENST00000404008 ERICH6Q7L0X2 663 aa35.7■■■■□ 3.31
USP42-202ENST00000404008 TTF1Q15361 905 aaPredicted RBP35.69■■■■□ 3.3
USP42-202ENST00000404008 EDC3Q96F86 508 aaKnown RBP35.69■■■■□ 3.3
USP42-202ENST00000404008 MYOZ2Q9NPC6 264 aa35.69■■■■□ 3.3
USP42-202ENST00000404008 LRP2BPQ9P2M1 347 aa35.69■■■■□ 3.3
USP42-202ENST00000404008 MYH7P12883 1935 aa35.69■■■■□ 3.3
USP42-202ENST00000404008 SAMD7Q7Z3H4 446 aa35.68■■■■□ 3.3
USP42-202ENST00000404008 EGFRP00533 1210 aa35.67■■■■□ 3.3
USP42-202ENST00000404008 SERPINA10Q9UK55 444 aa35.67■■■■□ 3.3
USP42-202ENST00000404008 ECM29Q5VYK3 1845 aa35.67■■■■□ 3.3
USP42-202ENST00000404008 HDLBPQ00341 1268 aaKnown RBP35.66■■■■□ 3.3
USP42-202ENST00000404008 MECOMQ03112 1051 aa35.66■■■■□ 3.3
USP42-202ENST00000404008 TBC1D10BQ4KMP7 808 aaPredicted RBP35.66■■■■□ 3.3
USP42-202ENST00000404008 DZIP1Q86YF9 867 aaKnown RBP35.66■■■■□ 3.3
USP42-202ENST00000404008 RAI14Q9P0K7 980 aa35.66■■■■□ 3.3
USP42-202ENST00000404008 TRPM4Q8TD43 1214 aa35.65■■■■□ 3.3
USP42-202ENST00000404008 ZNF384Q8TF68 577 aa35.65■■■■□ 3.3
USP42-202ENST00000404008 MRIQ9BWK5 157 aa35.65■■■■□ 3.3
USP42-202ENST00000404008 IGSF3O75054 1194 aa35.64■■■■□ 3.3
USP42-202ENST00000404008 CRKP46108 304 aa35.64■■■■□ 3.3
USP42-202ENST00000404008 KIF4BQ2VIQ3 1234 aa35.64■■■■□ 3.3
USP42-202ENST00000404008 USP50Q70EL3 339 aaPredicted RBP35.64■■■■□ 3.3
USP42-202ENST00000404008 MTMR14Q8NCE2 650 aa35.64■■■■□ 3.3
USP42-202ENST00000404008 NSUN4Q96CB9 384 aaKnown RBP35.64■■■■□ 3.3
USP42-202ENST00000404008 IDH1O75874 414 aaKnown RBP35.64■■■■□ 3.3
USP42-202ENST00000404008 MAP4K4O95819 1239 aaPredicted RBP35.64■■■■□ 3.3
USP42-202ENST00000404008 DIXDC1Q155Q3 683 aa35.64■■■■□ 3.3
USP42-202ENST00000404008 CFAP100Q494V2 611 aa35.64■■■■□ 3.3
USP42-202ENST00000404008 TEKT1Q969V4 418 aa35.64■■■■□ 3.3
USP42-202ENST00000404008 RBM26Q5T8P6 1007 aaKnown RBP35.63■■■■□ 3.29
USP42-202ENST00000404008 PNMA8AQ86V59 439 aaPredicted RBP35.63■■■■□ 3.29
USP42-202ENST00000404008 HIRAP54198 1017 aaPredicted RBP35.62■■■■□ 3.29
USP42-202ENST00000404008 HHIPL2Q6UWX4 724 aa35.62■■■■□ 3.29
USP42-202ENST00000404008 SKAP1Q86WV1 359 aa35.62■■■■□ 3.29
USP42-202ENST00000404008 ZBED3Q96IU2 234 aaPredicted RBP35.62■■■■□ 3.29
USP42-202ENST00000404008 PCDHAC2Q9Y5I4 1007 aa35.62■■■■□ 3.29
USP42-202ENST00000404008 AK9Q5TCS8 1911 aa35.62■■■■□ 3.29
USP42-202ENST00000404008 MAP3K12Q12852 859 aa35.61■■■■□ 3.29
USP42-202ENST00000404008 DLGAP5Q15398 846 aa35.61■■■■□ 3.29
USP42-202ENST00000404008 KIF3CO14782 793 aa35.6■■■■□ 3.29
USP42-202ENST00000404008 RBM5P52756 815 aaKnown RBP eCLIP35.6■■■■□ 3.29
USP42-202ENST00000404008 ZDHHC15Q96MV8 337 aa35.6■■■■□ 3.29
USP42-202ENST00000404008 SPDYE2BA6NHP3 402 aa35.59■■■■□ 3.29
USP42-202ENST00000404008 SPDYE6P0CI01 402 aa35.59■■■■□ 3.29
USP42-202ENST00000404008 GSTO1P78417 241 aa35.59■■■■□ 3.29
USP42-202ENST00000404008 EAPPQ56P03 285 aaPredicted RBP35.59■■■■□ 3.29
USP42-202ENST00000404008 SLF2Q8IX21 1173 aa35.59■■■■□ 3.29
USP42-202ENST00000404008 GAKO14976 1311 aa35.58■■■■□ 3.29
USP42-202ENST00000404008 WNT10BO00744 389 aa35.58■■■■□ 3.29
USP42-202ENST00000404008 NAA16Q6N069 864 aaPredicted RBP35.58■■■■□ 3.29
USP42-202ENST00000404008 KBTBD3Q8NAB2 608 aa35.58■■■■□ 3.29
USP42-202ENST00000404008 FAM163AQ96GL9 167 aaPredicted RBP35.58■■■■□ 3.29
USP42-202ENST00000404008 DAGLAQ9Y4D2 1042 aa35.58■■■■□ 3.29
USP42-202ENST00000404008 MROH7-TTC4A0A0A0MT08 1334 aa35.58■■■■□ 3.29
USP42-202ENST00000404008 NBPF9Q3BBW0 867 aa35.57■■■■□ 3.28
USP42-202ENST00000404008 PRMT6Q96LA8 375 aaPredicted RBP35.57■■■■□ 3.28
USP42-202ENST00000404008 POTEIP0CG38 1075 aa35.56■■■■□ 3.28
USP42-202ENST00000404008 POTEJP0CG39 1038 aa35.56■■■■□ 3.28
USP42-202ENST00000404008 TTC22Q5TAA0 569 aa35.56■■■■□ 3.28
USP42-202ENST00000404008 TMED8Q6PL24 325 aaPredicted RBP35.56■■■■□ 3.28
USP42-202ENST00000404008 MAGEB6Q8N7X4 407 aa35.56■■■■□ 3.28
USP42-202ENST00000404008 DDX24Q9GZR7 859 aaKnown RBP eCLIP35.56■■■■□ 3.28
USP42-202ENST00000404008 GTF3C3Q9Y5Q9 886 aa35.56■■■■□ 3.28
USP42-202ENST00000404008 SLC9C2Q5TAH2 1124 aa35.55■■■■□ 3.28
USP42-202ENST00000404008 LDHCP07864 332 aa35.54■■■■□ 3.28
USP42-202ENST00000404008 PDE6AP16499 860 aa35.54■■■■□ 3.28
USP42-202ENST00000404008 APOBEC3HQ6NTF7 200 aaKnown RBP35.54■■■■□ 3.28
USP42-202ENST00000404008 EVI5LQ96CN4 794 aa35.54■■■■□ 3.28
USP42-202ENST00000404008 ZC3H15Q8WU90 426 aaKnown RBP35.53■■■■□ 3.28
USP42-202ENST00000404008 ASTN2O75129 1339 aaPredicted RBP35.53■■■■□ 3.28
USP42-202ENST00000404008 GSPT1P15170 499 aaKnown RBP35.52■■■■□ 3.28
USP42-202ENST00000404008 ADGRA1Q86SQ6 560 aa35.52■■■■□ 3.28
USP42-202ENST00000404008 LDHDQ86WU2 507 aa35.52■■■■□ 3.28
USP42-202ENST00000404008 PGAP2Q9UHJ9 254 aa35.52■■■■□ 3.28
USP42-202ENST00000404008 POLR2AP24928 1970 aaKnown RBP35.52■■■■□ 3.28
USP42-202ENST00000404008 TCRBV5S4A2TA0A5A2 114 aa35.51■■■■□ 3.28
USP42-202ENST00000404008 TRIM6-TRIM34B2RNG4 842 aa35.51■■■■□ 3.28
USP42-202ENST00000404008 CYP7A1P22680 504 aa35.51■■■■□ 3.28
USP42-202ENST00000404008 ADD2P35612 726 aa35.51■■■■□ 3.28
USP42-202ENST00000404008 RGS3P49796 1198 aa35.51■■■■□ 3.28
USP42-202ENST00000404008 FSD1Q9BTV5 496 aa35.51■■■■□ 3.28
USP42-202ENST00000404008 GPR75-ASB3A0A0A6YYF3 556 aa35.51■■■■□ 3.27
USP42-202ENST00000404008 ZSCAN25Q6NSZ9 544 aa35.51■■■■□ 3.27
USP42-202ENST00000404008 CNTROBQ8N137 903 aa35.51■■■■□ 3.27
USP42-202ENST00000404008 ZNF532Q9HCE3 1301 aa35.5■■■■□ 3.27
USP42-202ENST00000404008 MYO1BO43795 1136 aa35.5■■■■□ 3.27
USP42-202ENST00000404008 CLEC11AQ9Y240 323 aa35.5■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms