RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 PIP4K2BP78356 416 aa3.93□□□□□ -1.78
CBX3P9-201ENST00000402326 TRIM28Q13263 835 aaKnown RBP3.93□□□□□ -1.78
CBX3P9-201ENST00000402326 ILDR2Q71H61 639 aa3.93□□□□□ -1.78
CBX3P9-201ENST00000402326 MAP4K3Q8IVH8 894 aa3.93□□□□□ -1.78
CBX3P9-201ENST00000402326 DTWD1Q8N5C7 304 aa3.93□□□□□ -1.78
CBX3P9-201ENST00000402326 TMEM87AQ8NBN3 555 aa3.93□□□□□ -1.78
CBX3P9-201ENST00000402326 DDX54Q8TDD1 881 aaKnown RBP3.93□□□□□ -1.78
CBX3P9-201ENST00000402326 DCAF11Q8TEB1 546 aa3.93□□□□□ -1.78
CBX3P9-201ENST00000402326 ANKRD24Q8TF21 1146 aa3.93□□□□□ -1.78
CBX3P9-201ENST00000402326 WNT8BQ93098 351 aa3.93□□□□□ -1.78
CBX3P9-201ENST00000402326 TRIM11Q96F44 468 aa3.93□□□□□ -1.78
CBX3P9-201ENST00000402326 PLVAPQ9BX97 442 aa3.93□□□□□ -1.78
CBX3P9-201ENST00000402326 CEP44Q9C0F1 390 aa3.93□□□□□ -1.78
CBX3P9-201ENST00000402326 SRA1Q9HD15 236 aaKnown RBP3.93□□□□□ -1.78
CBX3P9-201ENST00000402326 OSGEPQ9NPF4 335 aa3.93□□□□□ -1.78
CBX3P9-201ENST00000402326 NOP53Q9NZM5 478 aaKnown RBP3.93□□□□□ -1.78
CBX3P9-201ENST00000402326 A0A0A0MRY4 1105 aa3.92□□□□□ -1.78
CBX3P9-201ENST00000402326 FSCN2O14926 492 aa3.92□□□□□ -1.78
CBX3P9-201ENST00000402326 B3GALT4O96024 378 aa3.92□□□□□ -1.78
CBX3P9-201ENST00000402326 ST13P50502 369 aaKnown RBP3.92□□□□□ -1.78
CBX3P9-201ENST00000402326 RAC1P63000 192 aa3.92□□□□□ -1.78
CBX3P9-201ENST00000402326 HDLBPQ00341 1268 aaKnown RBP3.92□□□□□ -1.78
CBX3P9-201ENST00000402326 PPP2R3AQ06190 1150 aa3.92□□□□□ -1.78
CBX3P9-201ENST00000402326 C19orf57Q0VDD7 668 aa3.92□□□□□ -1.78
CBX3P9-201ENST00000402326 ZNF423Q2M1K9 1284 aa3.92□□□□□ -1.78
CBX3P9-201ENST00000402326 ARTNQ5T4W7 220 aa3.92□□□□□ -1.78
CBX3P9-201ENST00000402326 MEI1Q5TIA1 1274 aa3.92□□□□□ -1.78
CBX3P9-201ENST00000402326 TXNDC11Q6PKC3 985 aa3.92□□□□□ -1.78
CBX3P9-201ENST00000402326 TPTE2Q6XPS3 522 aa3.92□□□□□ -1.78
CBX3P9-201ENST00000402326 KLHL23Q8NBE8 558 aa3.92□□□□□ -1.78
CBX3P9-201ENST00000402326 SLC7A3Q8WY07 619 aa3.92□□□□□ -1.78
CBX3P9-201ENST00000402326 SOX17Q9H6I2 414 aaPredicted RBP3.92□□□□□ -1.78
CBX3P9-201ENST00000402326 SEC31BQ9NQW1 1179 aa3.92□□□□□ -1.78
CBX3P9-201ENST00000402326 TMEM39AQ9NV64 488 aa3.92□□□□□ -1.78
CBX3P9-201ENST00000402326 GPN3Q9UHW5 284 aaPredicted RBP3.92□□□□□ -1.78
CBX3P9-201ENST00000402326 TTF2Q9UNY4 1162 aaKnown RBP3.92□□□□□ -1.78
CBX3P9-201ENST00000402326 LOC105371045A0A1W2PR82 267 aa3.91□□□□□ -1.78
CBX3P9-201ENST00000402326 ZNF157P51786 506 aaPredicted RBP3.91□□□□□ -1.78
CBX3P9-201ENST00000402326 FAAP100Q0VG06 881 aa3.91□□□□□ -1.78
CBX3P9-201ENST00000402326 SETDB1Q15047 1291 aa3.91□□□□□ -1.78
CBX3P9-201ENST00000402326 CCDC85BQ15834 202 aaPredicted RBP3.91□□□□□ -1.78
CBX3P9-201ENST00000402326 PRRT3Q5FWE3 981 aa3.91□□□□□ -1.78
CBX3P9-201ENST00000402326 SV2BQ7L1I2 683 aa3.91□□□□□ -1.78
CBX3P9-201ENST00000402326 FBXO11Q86XK2 927 aa3.91□□□□□ -1.78
CBX3P9-201ENST00000402326 FMR1NBQ8N0W7 255 aaPredicted RBP3.91□□□□□ -1.78
CBX3P9-201ENST00000402326 NECAB3Q96P71 396 aaPredicted RBP3.91□□□□□ -1.78
CBX3P9-201ENST00000402326 NOC4LQ9BVI4 516 aaKnown RBP3.91□□□□□ -1.78
CBX3P9-201ENST00000402326 CARD10Q9BWT7 1032 aa3.91□□□□□ -1.78
CBX3P9-201ENST00000402326 USP35Q9P2H5 1018 aa3.91□□□□□ -1.78
CBX3P9-201ENST00000402326 SAMM50Q9Y512 469 aa3.91□□□□□ -1.78
CBX3P9-201ENST00000402326 SCAMP3O14828 347 aaKnown RBP3.9□□□□□ -1.79
CBX3P9-201ENST00000402326 DEAF1O75398 565 aaPredicted RBP3.9□□□□□ -1.79
CBX3P9-201ENST00000402326 FBXO24O75426 580 aa3.9□□□□□ -1.79
CBX3P9-201ENST00000402326 CYP11A1P05108 521 aa3.9□□□□□ -1.79
CBX3P9-201ENST00000402326 RLBP1P12271 317 aa3.9□□□□□ -1.79
CBX3P9-201ENST00000402326 ELNP15502 786 aa3.9□□□□□ -1.79
CBX3P9-201ENST00000402326 ITGB7P26010 798 aa3.9□□□□□ -1.79
CBX3P9-201ENST00000402326 ERCC5P28715 1186 aaPredicted RBP3.9□□□□□ -1.79
CBX3P9-201ENST00000402326 CD68P34810 354 aaPredicted RBP3.9□□□□□ -1.79
CBX3P9-201ENST00000402326 GSTM4Q03013 218 aa3.9□□□□□ -1.79
CBX3P9-201ENST00000402326 HGSNATQ68CP4 663 aa3.9□□□□□ -1.79
CBX3P9-201ENST00000402326 GALNT11Q8NCW6 608 aa3.9□□□□□ -1.79
CBX3P9-201ENST00000402326 KLHDC7BQ96G42 594 aa3.9□□□□□ -1.79
CBX3P9-201ENST00000402326 SEMA6BQ9H3T3 888 aa3.9□□□□□ -1.79
CBX3P9-201ENST00000402326 METTL5Q9NRN9 209 aaKnown RBP3.9□□□□□ -1.79
CBX3P9-201ENST00000402326 FAM229AH3BQW9 127 aa3.89□□□□□ -1.79
CBX3P9-201ENST00000402326 ENC1O14682 589 aa3.89□□□□□ -1.79
CBX3P9-201ENST00000402326 SPATA31C1P0DKV0 1188 aa3.89□□□□□ -1.79
CBX3P9-201ENST00000402326 NME2P22392 152 aa3.89□□□□□ -1.79
CBX3P9-201ENST00000402326 ZNF76P36508 570 aa3.89□□□□□ -1.79
CBX3P9-201ENST00000402326 AP3B2Q13367 1082 aa3.89□□□□□ -1.79
CBX3P9-201ENST00000402326 IGF2-ASQ6U949 168 aa3.89□□□□□ -1.79
CBX3P9-201ENST00000402326 HS2ST1Q7LGA3 356 aa3.89□□□□□ -1.79
CBX3P9-201ENST00000402326 ALYREFQ86V81 257 aaKnown RBP3.89□□□□□ -1.79
CBX3P9-201ENST00000402326 METTL16Q86W50 562 aaKnown RBP3.89□□□□□ -1.79
CBX3P9-201ENST00000402326 RNF34Q969K3 372 aa3.89□□□□□ -1.79
CBX3P9-201ENST00000402326 EMILIN2Q9BXX0 1053 aa3.89□□□□□ -1.79
CBX3P9-201ENST00000402326 DLL1O00548 723 aa3.88□□□□□ -1.79
CBX3P9-201ENST00000402326 TM4SF5O14894 197 aa3.88□□□□□ -1.79
CBX3P9-201ENST00000402326 DDX3YO15523 660 aaKnown RBP3.88□□□□□ -1.79
CBX3P9-201ENST00000402326 CELA3AP09093 270 aa3.88□□□□□ -1.79
CBX3P9-201ENST00000402326 ARNTP27540 789 aa3.88□□□□□ -1.79
CBX3P9-201ENST00000402326 COL8A1P27658 744 aa3.88□□□□□ -1.79
CBX3P9-201ENST00000402326 NLRP12P59046 1061 aa3.88□□□□□ -1.79
CBX3P9-201ENST00000402326 FANCCQ00597 558 aa3.88□□□□□ -1.79
CBX3P9-201ENST00000402326 RAD51AP2Q09MP3 1159 aa3.88□□□□□ -1.79
CBX3P9-201ENST00000402326 PWP1Q13610 501 aa3.88□□□□□ -1.79
CBX3P9-201ENST00000402326 LRRC14Q15048 493 aa3.88□□□□□ -1.79
CBX3P9-201ENST00000402326 POU4F3Q15319 338 aa3.88□□□□□ -1.79
CBX3P9-201ENST00000402326 GRIK4Q16099 956 aa3.88□□□□□ -1.79
CBX3P9-201ENST00000402326 TTBK2Q6IQ55 1244 aa3.88□□□□□ -1.79
CBX3P9-201ENST00000402326 NT5DC4Q86YG4 428 aa3.88□□□□□ -1.79
CBX3P9-201ENST00000402326 RELL1Q8IUW5 271 aa3.88□□□□□ -1.79
CBX3P9-201ENST00000402326 SULF2Q8IWU5 870 aa3.88□□□□□ -1.79
CBX3P9-201ENST00000402326 FMNL2Q96PY5 1086 aa3.88□□□□□ -1.79
CBX3P9-201ENST00000402326 NACC1Q96RE7 527 aa3.88□□□□□ -1.79
CBX3P9-201ENST00000402326 CORO1BQ9BR76 489 aa3.88□□□□□ -1.79
CBX3P9-201ENST00000402326 TRIM56Q9BRZ2 755 aaKnown RBP3.88□□□□□ -1.79
CBX3P9-201ENST00000402326 RSRP1Q9BUV0 290 aa3.88□□□□□ -1.79
CBX3P9-201ENST00000402326 CBX8Q9HC52 389 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms