RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 CLIC6Q96NY7 704 aa12.91□□□□□ -0.34
SCFD2-202ENST00000401642 MAP3K15Q6ZN16 1313 aa12.91□□□□□ -0.34
SCFD2-202ENST00000401642 TRPM3Q9HCF6 1732 aaPredicted RBP12.91□□□□□ -0.34
SCFD2-202ENST00000401642 EXOC5O00471 708 aa12.91□□□□□ -0.34
SCFD2-202ENST00000401642 LRRFIP1Q32MZ4 808 aaKnown RBP12.91□□□□□ -0.34
SCFD2-202ENST00000401642 NAA16Q6N069 864 aaPredicted RBP12.91□□□□□ -0.34
SCFD2-202ENST00000401642 LLPHQ9BRT6 129 aaKnown RBP12.91□□□□□ -0.34
SCFD2-202ENST00000401642 ALDH8A1Q9H2A2 487 aaPredicted RBP12.91□□□□□ -0.34
SCFD2-202ENST00000401642 RCOR1Q9UKL0 485 aa12.91□□□□□ -0.34
SCFD2-202ENST00000401642 N4BP2Q86UW6 1770 aaPredicted RBP12.91□□□□□ -0.34
SCFD2-202ENST00000401642 CIAO1O76071 339 aa12.91□□□□□ -0.34
SCFD2-202ENST00000401642 TMEM67Q5HYA8 995 aa12.91□□□□□ -0.34
SCFD2-202ENST00000401642 MRPS27Q92552 414 aaKnown RBP12.91□□□□□ -0.34
SCFD2-202ENST00000401642 SLC26A6Q9BXS9 759 aa12.91□□□□□ -0.34
SCFD2-202ENST00000401642 GPR108Q9NPR9 543 aa12.91□□□□□ -0.34
SCFD2-202ENST00000401642 HPS5Q9UPZ3 1129 aa12.91□□□□□ -0.34
SCFD2-202ENST00000401642 RIPOR2Q9Y4F9 1068 aa12.91□□□□□ -0.34
SCFD2-202ENST00000401642 IFIT3O14879 490 aaKnown RBP12.9□□□□□ -0.34
SCFD2-202ENST00000401642 PDE6AP16499 860 aa12.9□□□□□ -0.34
SCFD2-202ENST00000401642 TDO2P48775 406 aa12.9□□□□□ -0.34
SCFD2-202ENST00000401642 SNW1Q13573 536 aaKnown RBP12.9□□□□□ -0.34
SCFD2-202ENST00000401642 DPCR1Q3MIW9 517 aa12.9□□□□□ -0.34
SCFD2-202ENST00000401642 ZSCAN25Q6NSZ9 544 aa12.9□□□□□ -0.34
SCFD2-202ENST00000401642 NAPBQ9H115 298 aa12.9□□□□□ -0.34
SCFD2-202ENST00000401642 SCN11AQ9UI33 1791 aa12.9□□□□□ -0.34
SCFD2-202ENST00000401642 SPDYE4A6NLX3 237 aa12.9□□□□□ -0.34
SCFD2-202ENST00000401642 SPTLC2O15270 562 aa12.9□□□□□ -0.34
SCFD2-202ENST00000401642 LMOD1P29536 600 aaPredicted RBP12.9□□□□□ -0.34
SCFD2-202ENST00000401642 CDC27P30260 824 aa12.9□□□□□ -0.34
SCFD2-202ENST00000401642 FAM160A1Q05DH4 1040 aa12.9□□□□□ -0.34
SCFD2-202ENST00000401642 STX1AQ16623 288 aa12.9□□□□□ -0.34
SCFD2-202ENST00000401642 ZNF274Q96GC6 653 aaPredicted RBP12.9□□□□□ -0.34
SCFD2-202ENST00000401642 USP54Q70EL1 1684 aa12.9□□□□□ -0.34
SCFD2-202ENST00000401642 PDE8BO95263 885 aa12.89□□□□□ -0.35
SCFD2-202ENST00000401642 PDILTQ8N807 584 aa12.89□□□□□ -0.35
SCFD2-202ENST00000401642 LRP2BPQ9P2M1 347 aa12.89□□□□□ -0.35
SCFD2-202ENST00000401642 KCNJ14Q9UNX9 436 aa12.89□□□□□ -0.35
SCFD2-202ENST00000401642 MTMR7Q9Y216 660 aa12.89□□□□□ -0.35
SCFD2-202ENST00000401642 JCADQ9P266 1359 aa12.89□□□□□ -0.35
SCFD2-202ENST00000401642 USP27XA6NNY8 438 aa12.89□□□□□ -0.35
SCFD2-202ENST00000401642 MB21D2Q8IYB1 491 aaPredicted RBP12.89□□□□□ -0.35
SCFD2-202ENST00000401642 NEDD4P46934 1319 aa12.89□□□□□ -0.35
SCFD2-202ENST00000401642 GOLGA8AA7E2F4 631 aa12.89□□□□□ -0.35
SCFD2-202ENST00000401642 DHX16O60231 1041 aaKnown RBP12.89□□□□□ -0.35
SCFD2-202ENST00000401642 ZFYP08048 801 aaPredicted RBP12.89□□□□□ -0.35
SCFD2-202ENST00000401642 TNNT1P13805 278 aa12.89□□□□□ -0.35
SCFD2-202ENST00000401642 ADD2P35612 726 aa12.89□□□□□ -0.35
SCFD2-202ENST00000401642 ATP6V1AP38606 617 aa12.89□□□□□ -0.35
SCFD2-202ENST00000401642 MYSM1Q5VVJ2 828 aa12.89□□□□□ -0.35
SCFD2-202ENST00000401642 CEP57L1Q8IYX8 460 aa12.89□□□□□ -0.35
SCFD2-202ENST00000401642 FBXO18Q8NFZ0 1043 aa12.89□□□□□ -0.35
SCFD2-202ENST00000401642 NBPF3Q9H094 633 aa12.89□□□□□ -0.35
SCFD2-202ENST00000401642 UBN2Q6ZU65 1347 aa12.88□□□□□ -0.35
SCFD2-202ENST00000401642 DYNC1I1O14576 645 aa12.88□□□□□ -0.35
SCFD2-202ENST00000401642 PRDM1O75626 825 aa12.88□□□□□ -0.35
SCFD2-202ENST00000401642 CYP19A1P11511 503 aaPredicted RBP12.88□□□□□ -0.35
SCFD2-202ENST00000401642 SUSD4Q5VX71 490 aa12.88□□□□□ -0.35
SCFD2-202ENST00000401642 MYRIPQ8NFW9 859 aa12.88□□□□□ -0.35
SCFD2-202ENST00000401642 COL5A2P05997 1499 aaPredicted RBP12.88□□□□□ -0.35
SCFD2-202ENST00000401642 CBX1P83916 185 aa12.88□□□□□ -0.35
SCFD2-202ENST00000401642 GOLGA8FQ08AF8 430 aa12.88□□□□□ -0.35
SCFD2-202ENST00000401642 GOLGA8DPQ0D2H9 430 aa12.88□□□□□ -0.35
SCFD2-202ENST00000401642 LINC00301Q8NCQ3 95 aa12.88□□□□□ -0.35
SCFD2-202ENST00000401642 SDR42E1Q8WUS8 393 aa12.88□□□□□ -0.35
SCFD2-202ENST00000401642 ANGEL1Q9UNK9 670 aaKnown RBP12.88□□□□□ -0.35
SCFD2-202ENST00000401642 SLC3A2P08195 630 aaKnown RBP12.87□□□□□ -0.35
SCFD2-202ENST00000401642 RASGRF1Q13972 1273 aa12.87□□□□□ -0.35
SCFD2-202ENST00000401642 ANO10Q9NW15 660 aa12.87□□□□□ -0.35
SCFD2-202ENST00000401642 NIP7Q9Y221 180 aaKnown RBP eCLIP12.87□□□□□ -0.35
SCFD2-202ENST00000401642 CRYBG1Q9Y4K1 1723 aa12.87□□□□□ -0.35
SCFD2-202ENST00000401642 CPDO75976 1380 aa12.87□□□□□ -0.35
SCFD2-202ENST00000401642 ZBTB43O43298 467 aa12.87□□□□□ -0.35
SCFD2-202ENST00000401642 ZNF202O95125 648 aa12.87□□□□□ -0.35
SCFD2-202ENST00000401642 CSF1RP07333 972 aa12.87□□□□□ -0.35
SCFD2-202ENST00000401642 SKILP12757 684 aa12.87□□□□□ -0.35
SCFD2-202ENST00000401642 TRIM29Q14134 588 aa12.87□□□□□ -0.35
SCFD2-202ENST00000401642 KRT40Q6A162 431 aa12.87□□□□□ -0.35
SCFD2-202ENST00000401642 VPS37DQ86XT2 251 aa12.87□□□□□ -0.35
SCFD2-202ENST00000401642 TDRD7Q8NHU6 1098 aaKnown RBP12.87□□□□□ -0.35
SCFD2-202ENST00000401642 SLC4A4Q9Y6R1 1079 aa12.87□□□□□ -0.35
SCFD2-202ENST00000401642 SIPA1L3O60292 1781 aaPredicted RBP12.87□□□□□ -0.35
SCFD2-202ENST00000401642 CYP2D7A0A087X1C5 515 aa12.87□□□□□ -0.35
SCFD2-202ENST00000401642 CCDC69A6NI79 296 aa12.87□□□□□ -0.35
SCFD2-202ENST00000401642 WDHD1O75717 1129 aaPredicted RBP12.87□□□□□ -0.35
SCFD2-202ENST00000401642 GUCY1A2P33402 732 aa12.87□□□□□ -0.35
SCFD2-202ENST00000401642 IARSP41252 1262 aaKnown RBP12.87□□□□□ -0.35
SCFD2-202ENST00000401642 IQCB1Q15051 598 aa12.87□□□□□ -0.35
SCFD2-202ENST00000401642 NKX1-1Q15270 411 aaPredicted RBP12.87□□□□□ -0.35
SCFD2-202ENST00000401642 SPATA5Q8NB90 893 aa12.87□□□□□ -0.35
SCFD2-202ENST00000401642 BCL2L12Q9HB09 334 aa12.87□□□□□ -0.35
SCFD2-202ENST00000401642 RAI14Q9P0K7 980 aa12.87□□□□□ -0.35
SCFD2-202ENST00000401642 IFNKQ9P0W0 207 aa12.87□□□□□ -0.35
SCFD2-202ENST00000401642 ZSWIM5Q9P217 1185 aa12.87□□□□□ -0.35
SCFD2-202ENST00000401642 SLC12A7Q9Y666 1083 aa12.87□□□□□ -0.35
SCFD2-202ENST00000401642 PDE8AO60658 829 aa12.86□□□□□ -0.35
SCFD2-202ENST00000401642 ANO1Q5XXA6 986 aa12.86□□□□□ -0.35
SCFD2-202ENST00000401642 TMC6Q7Z403 805 aa12.86□□□□□ -0.35
SCFD2-202ENST00000401642 TMX1Q9H3N1 280 aa12.86□□□□□ -0.35
SCFD2-202ENST00000401642 ARFGEF2Q9Y6D5 1785 aa12.86□□□□□ -0.35
SCFD2-202ENST00000401642 PFKFB1P16118 471 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms