RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 GSPT1P15170 499 aaKnown RBP19.38■□□□□ 0.69
HMGA1-204ENST00000401473 ZGPATQ8N5A5 531 aaKnown RBP19.38■□□□□ 0.69
HMGA1-204ENST00000401473 SUGT1Q9Y2Z0 365 aa19.38■□□□□ 0.69
HMGA1-204ENST00000401473 VEGFAP15692 232 aaPredicted RBP19.37■□□□□ 0.69
HMGA1-204ENST00000401473 MECOMQ03112 1051 aa19.37■□□□□ 0.69
HMGA1-204ENST00000401473 ERICH6Q7L0X2 663 aa19.37■□□□□ 0.69
HMGA1-204ENST00000401473 MICALL2Q8IY33 904 aa19.37■□□□□ 0.69
HMGA1-204ENST00000401473 PCDHAC2Q9Y5I4 1007 aa19.37■□□□□ 0.69
HMGA1-204ENST00000401473 IDH1O75874 414 aaKnown RBP19.37■□□□□ 0.69
HMGA1-204ENST00000401473 DIXDC1Q155Q3 683 aa19.37■□□□□ 0.69
HMGA1-204ENST00000401473 TTC22Q5TAA0 569 aa19.37■□□□□ 0.69
HMGA1-204ENST00000401473 NSUN4Q96CB9 384 aaKnown RBP19.37■□□□□ 0.69
HMGA1-204ENST00000401473 HACL1Q9UJ83 578 aa19.37■□□□□ 0.69
HMGA1-204ENST00000401473 ZNF280AP59817 542 aaPredicted RBP19.36■□□□□ 0.69
HMGA1-204ENST00000401473 TTF1Q15361 905 aaPredicted RBP19.36■□□□□ 0.69
HMGA1-204ENST00000401473 SLFNL1Q499Z3 407 aa19.36■□□□□ 0.69
HMGA1-204ENST00000401473 SPTY2D1Q68D10 685 aaPredicted RBP19.36■□□□□ 0.69
HMGA1-204ENST00000401473 SAMD7Q7Z3H4 446 aa19.36■□□□□ 0.69
HMGA1-204ENST00000401473 TAF1DQ9H5J8 278 aaPredicted RBP19.36■□□□□ 0.69
HMGA1-204ENST00000401473 RAI14Q9P0K7 980 aa19.36■□□□□ 0.69
HMGA1-204ENST00000401473 MYH2Q9UKX2 1941 aa19.35■□□□□ 0.69
HMGA1-204ENST00000401473 KIF3CO14782 793 aa19.35■□□□□ 0.69
HMGA1-204ENST00000401473 OGFOD1Q8N543 542 aa19.35■□□□□ 0.69
HMGA1-204ENST00000401473 KBTBD3Q8NAB2 608 aa19.35■□□□□ 0.69
HMGA1-204ENST00000401473 DOCK2Q92608 1830 aa19.35■□□□□ 0.69
HMGA1-204ENST00000401473 IQCA1LA6NCM1 817 aa19.34■□□□□ 0.69
HMGA1-204ENST00000401473 TRIM6-TRIM34B2RNG4 842 aa19.34■□□□□ 0.69
HMGA1-204ENST00000401473 POTEIP0CG38 1075 aa19.34■□□□□ 0.69
HMGA1-204ENST00000401473 POTEJP0CG39 1038 aa19.34■□□□□ 0.69
HMGA1-204ENST00000401473 LMOD1P29536 600 aaPredicted RBP19.34■□□□□ 0.69
HMGA1-204ENST00000401473 EPHX2P34913 555 aa19.34■□□□□ 0.69
HMGA1-204ENST00000401473 MRIQ9BWK5 157 aa19.34■□□□□ 0.69
HMGA1-204ENST00000401473 H7C1D1 291 aa19.33■□□□□ 0.69
HMGA1-204ENST00000401473 SDSP20132 328 aa19.33■□□□□ 0.69
HMGA1-204ENST00000401473 HIRAP54198 1017 aaPredicted RBP19.33■□□□□ 0.69
HMGA1-204ENST00000401473 MAP3K12Q12852 859 aa19.33■□□□□ 0.69
HMGA1-204ENST00000401473 RBM26Q5T8P6 1007 aaKnown RBP19.33■□□□□ 0.69
HMGA1-204ENST00000401473 SLC9C2Q5TAH2 1124 aa19.33■□□□□ 0.69
HMGA1-204ENST00000401473 ADGRA1Q86SQ6 560 aa19.33■□□□□ 0.69
HMGA1-204ENST00000401473 DZIP1Q86YF9 867 aaKnown RBP19.33■□□□□ 0.69
HMGA1-204ENST00000401473 TRPM4Q8TD43 1214 aa19.33■□□□□ 0.69
HMGA1-204ENST00000401473 RILPL2Q969X0 211 aa19.33■□□□□ 0.69
HMGA1-204ENST00000401473 EVI5LQ96CN4 794 aa19.33■□□□□ 0.69
HMGA1-204ENST00000401473 MYOZ2Q9NPC6 264 aa19.33■□□□□ 0.69
HMGA1-204ENST00000401473 SCN4AP35499 1836 aa19.33■□□□□ 0.68
HMGA1-204ENST00000401473 CRKP46108 304 aa19.33■□□□□ 0.68
HMGA1-204ENST00000401473 TBC1D10BQ4KMP7 808 aaPredicted RBP19.33■□□□□ 0.68
HMGA1-204ENST00000401473 MAGEB6Q8N7X4 407 aa19.33■□□□□ 0.68
HMGA1-204ENST00000401473 PRMT6Q96LA8 375 aaPredicted RBP19.33■□□□□ 0.68
HMGA1-204ENST00000401473 SERPINA10Q9UK55 444 aa19.33■□□□□ 0.68
HMGA1-204ENST00000401473 ADAMTSL1Q8N6G6 1762 aa19.32■□□□□ 0.68
HMGA1-204ENST00000401473 HDLBPQ00341 1268 aaKnown RBP19.32■□□□□ 0.68
HMGA1-204ENST00000401473 FAM163AQ96GL9 167 aaPredicted RBP19.32■□□□□ 0.68
HMGA1-204ENST00000401473 HDAC9Q9UKV0 1011 aa19.32■□□□□ 0.68
HMGA1-204ENST00000401473 MYH7P12883 1935 aa19.31■□□□□ 0.68
HMGA1-204ENST00000401473 TCRBV5S4A2TA0A5A2 114 aa19.31■□□□□ 0.68
HMGA1-204ENST00000401473 PDE6AP16499 860 aa19.31■□□□□ 0.68
HMGA1-204ENST00000401473 CFAP100Q494V2 611 aa19.31■□□□□ 0.68
HMGA1-204ENST00000401473 NAA16Q6N069 864 aaPredicted RBP19.31■□□□□ 0.68
HMGA1-204ENST00000401473 APOBEC3HQ6NTF7 200 aaKnown RBP19.31■□□□□ 0.68
HMGA1-204ENST00000401473 HHIPL2Q6UWX4 724 aa19.31■□□□□ 0.68
HMGA1-204ENST00000401473 ADARB2Q9NS39 739 aaKnown RBP19.31■□□□□ 0.68
HMGA1-204ENST00000401473 POLR2AP24928 1970 aaKnown RBP19.31■□□□□ 0.68
HMGA1-204ENST00000401473 WNT10BO00744 389 aa19.31■□□□□ 0.68
HMGA1-204ENST00000401473 ADD2P35612 726 aa19.31■□□□□ 0.68
HMGA1-204ENST00000401473 RBM5P52756 815 aaKnown RBP eCLIP19.31■□□□□ 0.68
HMGA1-204ENST00000401473 NBPF9Q3BBW0 867 aa19.31■□□□□ 0.68
HMGA1-204ENST00000401473 CNTROBQ8N137 903 aa19.31■□□□□ 0.68
HMGA1-204ENST00000401473 TEKT1Q969V4 418 aa19.31■□□□□ 0.68
HMGA1-204ENST00000401473 ZBED3Q96IU2 234 aaPredicted RBP19.31■□□□□ 0.68
HMGA1-204ENST00000401473 DAGLAQ9Y4D2 1042 aa19.31■□□□□ 0.68
HMGA1-204ENST00000401473 MAST3O60307 1309 aa19.3■□□□□ 0.68
HMGA1-204ENST00000401473 AK9Q5TCS8 1911 aa19.3■□□□□ 0.68
HMGA1-204ENST00000401473 MMP14P50281 582 aa19.3■□□□□ 0.68
HMGA1-204ENST00000401473 MTMR14Q8NCE2 650 aa19.3■□□□□ 0.68
HMGA1-204ENST00000401473 ZDHHC15Q96MV8 337 aa19.3■□□□□ 0.68
HMGA1-204ENST00000401473 FSD1Q9BTV5 496 aa19.3■□□□□ 0.68
HMGA1-204ENST00000401473 ZNF532Q9HCE3 1301 aa19.3■□□□□ 0.68
HMGA1-204ENST00000401473 SPDYE2BA6NHP3 402 aa19.29■□□□□ 0.68
HMGA1-204ENST00000401473 SPDYE6P0CI01 402 aa19.29■□□□□ 0.68
HMGA1-204ENST00000401473 CYP7A1P22680 504 aa19.29■□□□□ 0.68
HMGA1-204ENST00000401473 EAPPQ56P03 285 aaPredicted RBP19.29■□□□□ 0.68
HMGA1-204ENST00000401473 GAKO14976 1311 aa19.29■□□□□ 0.68
HMGA1-204ENST00000401473 ASTN2O75129 1339 aaPredicted RBP19.29■□□□□ 0.68
HMGA1-204ENST00000401473 IGSF3O75054 1194 aa19.28■□□□□ 0.68
HMGA1-204ENST00000401473 DLGAP5Q15398 846 aa19.28■□□□□ 0.68
HMGA1-204ENST00000401473 KIF4BQ2VIQ3 1234 aa19.28■□□□□ 0.68
HMGA1-204ENST00000401473 BMP2KLQ5H9B9 411 aa19.28■□□□□ 0.68
HMGA1-204ENST00000401473 USP50Q70EL3 339 aaPredicted RBP19.28■□□□□ 0.68
HMGA1-204ENST00000401473 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.28■□□□□ 0.682e-7■□□□□ 9.5
HMGA1-204ENST00000401473 GPR75-ASB3A0A0A6YYF3 556 aa19.28■□□□□ 0.68
HMGA1-204ENST00000401473 PNMA8AQ86V59 439 aaPredicted RBP19.28■□□□□ 0.68
HMGA1-204ENST00000401473 MROH7-TTC4A0A0A0MT08 1334 aa19.28■□□□□ 0.68
HMGA1-204ENST00000401473 RNF113AO15541 343 aaKnown RBP19.27■□□□□ 0.68
HMGA1-204ENST00000401473 GSTO1P78417 241 aa19.27■□□□□ 0.68
HMGA1-204ENST00000401473 UBE3CQ15386 1083 aa19.27■□□□□ 0.68
HMGA1-204ENST00000401473 MIGA1Q8NAN2 632 aa19.27■□□□□ 0.68
HMGA1-204ENST00000401473 OSBP2Q969R2 916 aa19.27■□□□□ 0.68
HMGA1-204ENST00000401473 PUS7LQ9H0K6 701 aaKnown RBP19.27■□□□□ 0.68
HMGA1-204ENST00000401473 TDRD3Q9H7E2 651 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms