RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 PRKG1Q13976 671 aa10.41□□□□□ -0.74
USP16-202ENST00000399973 GRIK5Q16478 980 aa10.41□□□□□ -0.74
USP16-202ENST00000399973 GORABQ5T7V8 394 aa10.41□□□□□ -0.74
USP16-202ENST00000399973 ZBED3Q96IU2 234 aaPredicted RBP10.41□□□□□ -0.74
USP16-202ENST00000399973 NEUROD6Q96NK8 337 aa10.41□□□□□ -0.74
USP16-202ENST00000399973 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.41□□□□□ -0.74
USP16-202ENST00000399973 AKAP2Q9Y2D5 859 aa10.41□□□□□ -0.74
USP16-202ENST00000399973 COG6Q9Y2V7 657 aa10.41□□□□□ -0.74
USP16-202ENST00000399973 MYO5AQ9Y4I1 1855 aaKnown RBP10.4□□□□□ -0.74
USP16-202ENST00000399973 SSC5DA1L4H1 1573 aa10.4□□□□□ -0.74
USP16-202ENST00000399973 MAST3O60307 1309 aa10.4□□□□□ -0.74
USP16-202ENST00000399973 MOB2Q70IA6 237 aa10.4□□□□□ -0.74
USP16-202ENST00000399973 MTMR14Q8NCE2 650 aa10.4□□□□□ -0.74
USP16-202ENST00000399973 WDR66Q8TBY9 1149 aa10.4□□□□□ -0.74
USP16-202ENST00000399973 TEKT1Q969V4 418 aa10.4□□□□□ -0.74
USP16-202ENST00000399973 PRMT6Q96LA8 375 aaPredicted RBP10.4□□□□□ -0.74
USP16-202ENST00000399973 TDRD3Q9H7E2 651 aaKnown RBP10.4□□□□□ -0.74
USP16-202ENST00000399973 SERPINA10Q9UK55 444 aa10.4□□□□□ -0.74
USP16-202ENST00000399973 ZBTB7BO15156 539 aaPredicted RBP10.39□□□□□ -0.75
USP16-202ENST00000399973 FOXN1O15353 648 aa10.39□□□□□ -0.75
USP16-202ENST00000399973 SURF6O75683 361 aaKnown RBP10.39□□□□□ -0.75
USP16-202ENST00000399973 ZNF157P51786 506 aaPredicted RBP10.39□□□□□ -0.75
USP16-202ENST00000399973 TIMM10P62072 90 aa10.39□□□□□ -0.75
USP16-202ENST00000399973 MVPQ14764 893 aaKnown RBP10.39□□□□□ -0.75
USP16-202ENST00000399973 CCDC102BQ68D86 513 aa10.39□□□□□ -0.75
USP16-202ENST00000399973 RGMBQ6NW40 437 aa10.39□□□□□ -0.75
USP16-202ENST00000399973 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.39□□□□□ -0.75
USP16-202ENST00000399973 XAGE2Q96GT9 111 aa10.39□□□□□ -0.75
USP16-202ENST00000399973 HHIPL1Q96JK4 782 aa10.39□□□□□ -0.75
USP16-202ENST00000399973 BEGAINQ9BUH8 593 aa10.39□□□□□ -0.75
USP16-202ENST00000399973 DEFB129Q9H1M3 183 aa10.39□□□□□ -0.75
USP16-202ENST00000399973 DDX19BQ9UMR2 479 aa10.39□□□□□ -0.75
USP16-202ENST00000399973 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.39□□□□□ -0.75
USP16-202ENST00000399973 TCP10L2B9ZVM9 353 aa10.38□□□□□ -0.75
USP16-202ENST00000399973 UBE2Q2LH0YL09 131 aa10.38□□□□□ -0.75
USP16-202ENST00000399973 SEMA3EO15041 775 aa10.38□□□□□ -0.75
USP16-202ENST00000399973 LDHBP07195 334 aaKnown RBP10.38□□□□□ -0.75
USP16-202ENST00000399973 PRDX5P30044 214 aa10.38□□□□□ -0.75
USP16-202ENST00000399973 CACNB3P54284 484 aa10.38□□□□□ -0.75
USP16-202ENST00000399973 FKBP1BP68106 108 aa10.38□□□□□ -0.75
USP16-202ENST00000399973 ATP8B2P98198 1209 aa10.38□□□□□ -0.75
USP16-202ENST00000399973 MAP2K1Q02750 393 aaPredicted RBP10.38□□□□□ -0.75
USP16-202ENST00000399973 TNFAIP1Q13829 316 aa10.38□□□□□ -0.75
USP16-202ENST00000399973 RASGRF1Q13972 1273 aa10.38□□□□□ -0.75
USP16-202ENST00000399973 POLA2Q14181 598 aa10.38□□□□□ -0.75
USP16-202ENST00000399973 DIXDC1Q155Q3 683 aa10.38□□□□□ -0.75
USP16-202ENST00000399973 SPDYE2Q495Y8 402 aa10.38□□□□□ -0.75
USP16-202ENST00000399973 CEP85Q6P2H3 762 aa10.38□□□□□ -0.75
USP16-202ENST00000399973 SSH3Q8TE77 659 aa10.38□□□□□ -0.75
USP16-202ENST00000399973 BCL11AQ9H165 835 aa10.38□□□□□ -0.75
USP16-202ENST00000399973 TMOD2Q9NZR1 351 aa10.38□□□□□ -0.75
USP16-202ENST00000399973 ZNF70Q9UC06 446 aaPredicted RBP10.38□□□□□ -0.75
USP16-202ENST00000399973 DENND2AQ9ULE3 1009 aa10.38□□□□□ -0.75
USP16-202ENST00000399973 FZD1Q9UP38 647 aa10.38□□□□□ -0.75
USP16-202ENST00000399973 PPP2R3BQ9Y5P8 575 aa10.38□□□□□ -0.75
USP16-202ENST00000399973 LAMB1P07942 1786 aa10.38□□□□□ -0.75
USP16-202ENST00000399973 PCNTO95613 3336 aa10.37□□□□□ -0.75
USP16-202ENST00000399973 TNNI2P48788 182 aa10.37□□□□□ -0.75
USP16-202ENST00000399973 NOGQ13253 232 aa10.37□□□□□ -0.75
USP16-202ENST00000399973 RASA3Q14644 834 aa10.37□□□□□ -0.75
USP16-202ENST00000399973 C20orf194Q5TEA3 1177 aa10.37□□□□□ -0.75
USP16-202ENST00000399973 DZIP1Q86YF9 867 aaKnown RBP10.37□□□□□ -0.75
USP16-202ENST00000399973 RASAL3Q86YV0 1011 aa10.37□□□□□ -0.75
USP16-202ENST00000399973 CDK5RAP2Q96SN8 1893 aa10.37□□□□□ -0.75
USP16-202ENST00000399973 ABCF2Q9UG63 623 aa10.37□□□□□ -0.75
USP16-202ENST00000399973 TSKSQ9UJT2 592 aa10.37□□□□□ -0.75
USP16-202ENST00000399973 ANGEL1Q9UNK9 670 aaKnown RBP10.37□□□□□ -0.75
USP16-202ENST00000399973 EXOC6BQ9Y2D4 811 aa10.37□□□□□ -0.75
USP16-202ENST00000399973 APBB1O00213 710 aa10.36□□□□□ -0.75
USP16-202ENST00000399973 CAPN15O75808 1086 aa10.36□□□□□ -0.75
USP16-202ENST00000399973 SLC10A3P09131 477 aa10.36□□□□□ -0.75
USP16-202ENST00000399973 MAP2K2P36507 400 aa10.36□□□□□ -0.75
USP16-202ENST00000399973 CTCFP49711 727 aaPredicted RBP10.36□□□□□ -0.75
USP16-202ENST00000399973 HDLBPQ00341 1268 aaKnown RBP10.36□□□□□ -0.75
USP16-202ENST00000399973 MKRN3Q13064 507 aaKnown RBP10.36□□□□□ -0.75
USP16-202ENST00000399973 TNNI3KQ59H18 835 aa10.36□□□□□ -0.75
USP16-202ENST00000399973 TTC39AQ5SRH9 613 aa10.36□□□□□ -0.75
USP16-202ENST00000399973 PI16Q6UXB8 463 aa10.36□□□□□ -0.75
USP16-202ENST00000399973 ARMC9Q7Z3E5 817 aa10.36□□□□□ -0.75
USP16-202ENST00000399973 CCDC102AQ96A19 550 aa10.36□□□□□ -0.75
USP16-202ENST00000399973 ZIC5Q96T25 663 aa10.36□□□□□ -0.75
USP16-202ENST00000399973 WBP1LQ9NX94 342 aa10.36□□□□□ -0.75
USP16-202ENST00000399973 SUGT1Q9Y2Z0 365 aa10.36□□□□□ -0.75
USP16-202ENST00000399973 FPGT-TNNI3KV9GXZ4 949 aa10.36□□□□□ -0.75
USP16-202ENST00000399973 SALL1Q9NSC2 1324 aa10.35□□□□□ -0.75
USP16-202ENST00000399973 FAM155AB1AL88 458 aaPredicted RBP10.35□□□□□ -0.75
USP16-202ENST00000399973 PPP1R12BO60237 982 aaPredicted RBP10.35□□□□□ -0.75
USP16-202ENST00000399973 LBX1P52954 281 aa10.35□□□□□ -0.75
USP16-202ENST00000399973 KIF23Q02241 960 aaPredicted RBP10.35□□□□□ -0.75
USP16-202ENST00000399973 NBPF12Q5TAG4 269 aaPredicted RBP10.35□□□□□ -0.75
USP16-202ENST00000399973 COL13A1Q5TAT6 717 aaPredicted RBP10.35□□□□□ -0.75
USP16-202ENST00000399973 CDAN1Q8IWY9 1227 aa10.35□□□□□ -0.75
USP16-202ENST00000399973 ZGPATQ8N5A5 531 aaKnown RBP10.35□□□□□ -0.75
USP16-202ENST00000399973 ZDHHC15Q96MV8 337 aa10.35□□□□□ -0.75
USP16-202ENST00000399973 DBNDD2Q9BQY9 259 aa10.35□□□□□ -0.75
USP16-202ENST00000399973 TMEM39BQ9GZU3 492 aa10.35□□□□□ -0.75
USP16-202ENST00000399973 DAGLAQ9Y4D2 1042 aa10.35□□□□□ -0.75
USP16-202ENST00000399973 PDS5AQ29RF7 1337 aaKnown RBP10.34□□□□□ -0.75
USP16-202ENST00000399973 HMMRO75330 724 aa10.34□□□□□ -0.75
USP16-202ENST00000399973 UQCRFS1P1P0C7P4 283 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms