RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 TNS4Q8IZW8 715 aa18.46■□□□□ 0.55
SMIM11A-203ENST00000399299 WDR66Q8TBY9 1149 aa18.46■□□□□ 0.55
SMIM11A-203ENST00000399299 ZIC5Q96T25 663 aa18.46■□□□□ 0.55
SMIM11A-203ENST00000399299 SEMA3EO15041 775 aa18.45■□□□□ 0.54
SMIM11A-203ENST00000399299 TTLL12Q14166 644 aaPredicted RBP18.45■□□□□ 0.54
SMIM11A-203ENST00000399299 MOB2Q70IA6 237 aa18.45■□□□□ 0.54
SMIM11A-203ENST00000399299 VEZTQ9HBM0 779 aa18.45■□□□□ 0.54
SMIM11A-203ENST00000399299 GNL3LQ9NVN8 582 aaKnown RBP18.45■□□□□ 0.54
SMIM11A-203ENST00000399299 ZNF70Q9UC06 446 aaPredicted RBP18.45■□□□□ 0.54
SMIM11A-203ENST00000399299 SSC5DA1L4H1 1573 aa18.45■□□□□ 0.54
SMIM11A-203ENST00000399299 AKAP11Q9UKA4 1901 aa18.45■□□□□ 0.54
SMIM11A-203ENST00000399299 UBE2Q2LH0YL09 131 aa18.44■□□□□ 0.54
SMIM11A-203ENST00000399299 KIF23Q02241 960 aaPredicted RBP18.44■□□□□ 0.54
SMIM11A-203ENST00000399299 ARMC9Q7Z3E5 817 aa18.44■□□□□ 0.54
SMIM11A-203ENST00000399299 REM2Q8IYK8 340 aaPredicted RBP18.44■□□□□ 0.54
SMIM11A-203ENST00000399299 TEKT1Q969V4 418 aa18.44■□□□□ 0.54
SMIM11A-203ENST00000399299 AKAP2Q9Y2D5 859 aa18.44■□□□□ 0.54
SMIM11A-203ENST00000399299 PNMA6EA0A0J9YXQ4 647 aa18.43■□□□□ 0.54
SMIM11A-203ENST00000399299 RLBP1P12271 317 aa18.43■□□□□ 0.54
SMIM11A-203ENST00000399299 MAP3K11Q16584 847 aa18.43■□□□□ 0.54
SMIM11A-203ENST00000399299 SUPT20HL1Q3ZLR7 823 aa18.43■□□□□ 0.54
SMIM11A-203ENST00000399299 ZDHHC15Q96MV8 337 aa18.43■□□□□ 0.54
SMIM11A-203ENST00000399299 TDRD3Q9H7E2 651 aaKnown RBP18.43■□□□□ 0.54
SMIM11A-203ENST00000399299 A0A1B0GUL7 405 aa18.42■□□□□ 0.54
SMIM11A-203ENST00000399299 PHKA1P46020 1223 aa18.42■□□□□ 0.54
SMIM11A-203ENST00000399299 TFCP2Q12800 502 aa18.42■□□□□ 0.54
SMIM11A-203ENST00000399299 POLA2Q14181 598 aa18.42■□□□□ 0.54
SMIM11A-203ENST00000399299 RASA3Q14644 834 aa18.42■□□□□ 0.54
SMIM11A-203ENST00000399299 LDLRAD1Q5T700 205 aa18.42■□□□□ 0.54
SMIM11A-203ENST00000399299 HHIPL2Q6UWX4 724 aa18.42■□□□□ 0.54
SMIM11A-203ENST00000399299 ITPRIPQ8IWB1 547 aa18.42■□□□□ 0.54
SMIM11A-203ENST00000399299 SAGE1Q9NXZ1 904 aa18.42■□□□□ 0.54
SMIM11A-203ENST00000399299 DENND2AQ9ULE3 1009 aa18.42■□□□□ 0.54
SMIM11A-203ENST00000399299 PDS5AQ29RF7 1337 aaKnown RBP18.42■□□□□ 0.54
SMIM11A-203ENST00000399299 SALL1Q9NSC2 1324 aa18.42■□□□□ 0.54
SMIM11A-203ENST00000399299 LAMB1P07942 1786 aa18.41■□□□□ 0.54
SMIM11A-203ENST00000399299 UNCXA6NJT0 531 aa18.41■□□□□ 0.54
SMIM11A-203ENST00000399299 ZBTB7BO15156 539 aaPredicted RBP18.41■□□□□ 0.54
SMIM11A-203ENST00000399299 PPP1R12BO60237 982 aaPredicted RBP18.41■□□□□ 0.54
SMIM11A-203ENST00000399299 ADORA1P30542 326 aa18.41■□□□□ 0.54
SMIM11A-203ENST00000399299 CCDC102BQ68D86 513 aa18.41■□□□□ 0.54
SMIM11A-203ENST00000399299 ANGEL1Q9UNK9 670 aaKnown RBP18.41■□□□□ 0.54
SMIM11A-203ENST00000399299 MS4A1P11836 297 aa18.4■□□□□ 0.54
SMIM11A-203ENST00000399299 TNNI2P48788 182 aa18.4■□□□□ 0.54
SMIM11A-203ENST00000399299 TIMM10P62072 90 aa18.4■□□□□ 0.54
SMIM11A-203ENST00000399299 G3BP1Q13283 466 aaKnown RBP eCLIP18.4■□□□□ 0.54
SMIM11A-203ENST00000399299 MVPQ14764 893 aaKnown RBP18.4■□□□□ 0.54
SMIM11A-203ENST00000399299 NBPF12Q5TAG4 269 aaPredicted RBP18.4■□□□□ 0.54
SMIM11A-203ENST00000399299 FKBP1CQ5VVH2 108 aa18.4■□□□□ 0.54
SMIM11A-203ENST00000399299 SSH3Q8TE77 659 aa18.4■□□□□ 0.54
SMIM11A-203ENST00000399299 CSRNP1Q96S65 589 aa18.4■□□□□ 0.54
SMIM11A-203ENST00000399299 ATP8B2P98198 1209 aa18.39■□□□□ 0.53
SMIM11A-203ENST00000399299 PRKG1Q13976 671 aa18.39■□□□□ 0.53
SMIM11A-203ENST00000399299 APOBEC3HQ6NTF7 200 aaKnown RBP18.39■□□□□ 0.53
SMIM11A-203ENST00000399299 ZGPATQ8N5A5 531 aaKnown RBP18.39■□□□□ 0.53
SMIM11A-203ENST00000399299 XAGE2Q96GT9 111 aa18.39■□□□□ 0.53
SMIM11A-203ENST00000399299 TEPSINQ96N21 525 aa18.39■□□□□ 0.53
SMIM11A-203ENST00000399299 OTOFQ9HC10 1997 aa18.39■□□□□ 0.53
SMIM11A-203ENST00000399299 LDHBP07195 334 aaKnown RBP18.38■□□□□ 0.53
SMIM11A-203ENST00000399299 PRDX5P30044 214 aa18.38■□□□□ 0.53
SMIM11A-203ENST00000399299 TMOD2Q9NZR1 351 aa18.38■□□□□ 0.53
SMIM11A-203ENST00000399299 TSKSQ9UJT2 592 aa18.38■□□□□ 0.53
SMIM11A-203ENST00000399299 TCP10L2B9ZVM9 353 aa18.37■□□□□ 0.53
SMIM11A-203ENST00000399299 IREB2P48200 963 aaKnown RBP18.37■□□□□ 0.53
SMIM11A-203ENST00000399299 RASGRF1Q13972 1273 aa18.37■□□□□ 0.53
SMIM11A-203ENST00000399299 FAM83AQ86UY5 434 aa18.37■□□□□ 0.53
SMIM11A-203ENST00000399299 C1orf115Q9H7X2 142 aa18.37■□□□□ 0.53
SMIM11A-203ENST00000399299 GPR108Q9NPR9 543 aa18.37■□□□□ 0.53
SMIM11A-203ENST00000399299 FZD1Q9UP38 647 aa18.37■□□□□ 0.53
SMIM11A-203ENST00000399299 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.37■□□□□ 0.53
SMIM11A-203ENST00000399299 RPAP1Q9BWH6 1393 aaPredicted RBP18.37■□□□□ 0.53
SMIM11A-203ENST00000399299 MYH2Q9UKX2 1941 aa18.37■□□□□ 0.53
SMIM11A-203ENST00000399299 PANK1Q8TE04 598 aa18.36■□□□□ 0.53
SMIM11A-203ENST00000399299 TMEM39BQ9GZU3 492 aa18.36■□□□□ 0.53
SMIM11A-203ENST00000399299 RNF186Q9NXI6 227 aa18.36■□□□□ 0.53
SMIM11A-203ENST00000399299 CASP8AP2Q9UKL3 1982 aa18.36■□□□□ 0.53
SMIM11A-203ENST00000399299 DAGLAQ9Y4D2 1042 aa18.36■□□□□ 0.53
SMIM11A-203ENST00000399299 USP2O75604 605 aaPredicted RBP18.35■□□□□ 0.53
SMIM11A-203ENST00000399299 TM4SF4P48230 202 aa18.35■□□□□ 0.53
SMIM11A-203ENST00000399299 SPRYD7Q5W111 196 aa18.35■□□□□ 0.53
SMIM11A-203ENST00000399299 SLC10A4Q96EP9 437 aa18.35■□□□□ 0.53
SMIM11A-203ENST00000399299 NEUROD6Q96NK8 337 aa18.35■□□□□ 0.53
SMIM11A-203ENST00000399299 NOP58Q9Y2X3 529 aaKnown RBP18.35■□□□□ 0.53
SMIM11A-203ENST00000399299 TRPA1O75762 1119 aa18.34■□□□□ 0.53
SMIM11A-203ENST00000399299 ZBTB48P10074 688 aaPredicted RBP18.34■□□□□ 0.53
SMIM11A-203ENST00000399299 ARID4AP29374 1257 aaPredicted RBP18.34■□□□□ 0.53
SMIM11A-203ENST00000399299 CACNB3P54284 484 aa18.34■□□□□ 0.53
SMIM11A-203ENST00000399299 SREBF2Q12772 1141 aa18.34■□□□□ 0.53
SMIM11A-203ENST00000399299 DIXDC1Q155Q3 683 aa18.34■□□□□ 0.53
SMIM11A-203ENST00000399299 ANKRD13AQ8IZ07 590 aa18.34■□□□□ 0.53
SMIM11A-203ENST00000399299 RCAN3Q9UKA8 241 aa18.34■□□□□ 0.53
SMIM11A-203ENST00000399299 SURF6O75683 361 aaKnown RBP18.33■□□□□ 0.52
SMIM11A-203ENST00000399299 OS9Q13438 667 aaPredicted RBP18.33■□□□□ 0.52
SMIM11A-203ENST00000399299 GORABQ5T7V8 394 aa18.33■□□□□ 0.52
SMIM11A-203ENST00000399299 SPTY2D1Q68D10 685 aaPredicted RBP18.33■□□□□ 0.52
SMIM11A-203ENST00000399299 CEP85Q6P2H3 762 aa18.33■□□□□ 0.52
SMIM11A-203ENST00000399299 CDAN1Q8IWY9 1227 aa18.33■□□□□ 0.52
SMIM11A-203ENST00000399299 HOOK2Q96ED9 719 aa18.33■□□□□ 0.52
SMIM11A-203ENST00000399299 CLMNQ96JQ2 1002 aa18.33■□□□□ 0.52
SMIM11A-203ENST00000399299 GAKO14976 1311 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms