RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 IGSF3O75054 1194 aa12.78□□□□□ -0.36
CYCSP55-201ENST00000399027 TBC1D10BQ4KMP7 808 aaPredicted RBP12.78□□□□□ -0.36
CYCSP55-201ENST00000399027 EAPPQ56P03 285 aaPredicted RBP12.78□□□□□ -0.36
CYCSP55-201ENST00000399027 PI16Q6UXB8 463 aa12.78□□□□□ -0.36
CYCSP55-201ENST00000399027 SERPINA10Q9UK55 444 aa12.78□□□□□ -0.36
CYCSP55-201ENST00000399027 TTF2Q9UNY4 1162 aaKnown RBP12.78□□□□□ -0.36
CYCSP55-201ENST00000399027 SALL3Q9BXA9 1300 aa12.78□□□□□ -0.36
CYCSP55-201ENST00000399027 AK9Q5TCS8 1911 aa12.78□□□□□ -0.36
CYCSP55-201ENST00000399027 F8W031 263 aaPredicted RBP12.77□□□□□ -0.37
CYCSP55-201ENST00000399027 WNT10BO00744 389 aa12.77□□□□□ -0.37
CYCSP55-201ENST00000399027 ATP5JP18859 108 aa12.77□□□□□ -0.37
CYCSP55-201ENST00000399027 PRDX5P30044 214 aa12.77□□□□□ -0.37
CYCSP55-201ENST00000399027 FSTL1Q12841 308 aa12.77□□□□□ -0.37
CYCSP55-201ENST00000399027 ANKRD45Q5TZF3 282 aa12.77□□□□□ -0.37
CYCSP55-201ENST00000399027 CHADLQ6NUI6 762 aa12.77□□□□□ -0.37
CYCSP55-201ENST00000399027 SMC1BQ8NDV3 1235 aa12.77□□□□□ -0.37
CYCSP55-201ENST00000399027 CYP2E1P05181 493 aaPredicted RBP12.76□□□□□ -0.37
CYCSP55-201ENST00000399027 LDHBP07195 334 aaKnown RBP12.76□□□□□ -0.37
CYCSP55-201ENST00000399027 ZAP70P43403 619 aa12.76□□□□□ -0.37
CYCSP55-201ENST00000399027 CRKP46108 304 aa12.76□□□□□ -0.37
CYCSP55-201ENST00000399027 CFAP100Q494V2 611 aa12.76□□□□□ -0.37
CYCSP55-201ENST00000399027 RBM26Q5T8P6 1007 aaKnown RBP12.76□□□□□ -0.37
CYCSP55-201ENST00000399027 SPTY2D1Q68D10 685 aaPredicted RBP12.76□□□□□ -0.37
CYCSP55-201ENST00000399027 TTC41PQ6P2S7 1318 aa12.76□□□□□ -0.37
CYCSP55-201ENST00000399027 PITPNM2Q9BZ72 1349 aa12.76□□□□□ -0.37
CYCSP55-201ENST00000399027 SPDYE2BA6NHP3 402 aa12.75□□□□□ -0.37
CYCSP55-201ENST00000399027 MYCNP04198 464 aaPredicted RBP12.75□□□□□ -0.37
CYCSP55-201ENST00000399027 NEFLP07196 543 aa12.75□□□□□ -0.37
CYCSP55-201ENST00000399027 SPDYE6P0CI01 402 aa12.75□□□□□ -0.37
CYCSP55-201ENST00000399027 NUCB1Q02818 461 aa12.75□□□□□ -0.37
CYCSP55-201ENST00000399027 DLGAP5Q15398 846 aa12.75□□□□□ -0.37
CYCSP55-201ENST00000399027 NBPF9Q3BBW0 867 aa12.75□□□□□ -0.37
CYCSP55-201ENST00000399027 HHIPL2Q6UWX4 724 aa12.75□□□□□ -0.37
CYCSP55-201ENST00000399027 ERICH6Q7L0X2 663 aa12.75□□□□□ -0.37
CYCSP55-201ENST00000399027 TEKT1Q969V4 418 aa12.75□□□□□ -0.37
CYCSP55-201ENST00000399027 ZDHHC15Q96MV8 337 aa12.75□□□□□ -0.37
CYCSP55-201ENST00000399027 SNRKQ9NRH2 765 aa12.75□□□□□ -0.37
CYCSP55-201ENST00000399027 ECHDC1Q9NTX5 307 aa12.75□□□□□ -0.37
CYCSP55-201ENST00000399027 ABCF2Q9UG63 623 aa12.75□□□□□ -0.37
CYCSP55-201ENST00000399027 CLEC11AQ9Y240 323 aa12.75□□□□□ -0.37
CYCSP55-201ENST00000399027 GAKO14976 1311 aa12.74□□□□□ -0.37
CYCSP55-201ENST00000399027 ITGBL1O95965 494 aaPredicted RBP12.74□□□□□ -0.37
CYCSP55-201ENST00000399027 TBC1D9Q6ZT07 1266 aa12.74□□□□□ -0.37
CYCSP55-201ENST00000399027 CHD1LQ86WJ1 897 aa12.74□□□□□ -0.37
CYCSP55-201ENST00000399027 ZNF384Q8TF68 577 aa12.74□□□□□ -0.37
CYCSP55-201ENST00000399027 FAM163AQ96GL9 167 aaPredicted RBP12.74□□□□□ -0.37
CYCSP55-201ENST00000399027 GPATCH3Q96I76 525 aa12.74□□□□□ -0.37
CYCSP55-201ENST00000399027 PRMT6Q96LA8 375 aaPredicted RBP12.74□□□□□ -0.37
CYCSP55-201ENST00000399027 HAUS7Q99871 368 aa12.74□□□□□ -0.37
CYCSP55-201ENST00000399027 ZBTB47Q9UFB7 747 aaPredicted RBP12.74□□□□□ -0.37
CYCSP55-201ENST00000399027 PCDHAC2Q9Y5I4 1007 aa12.74□□□□□ -0.37
CYCSP55-201ENST00000399027 ASTN2O75129 1339 aaPredicted RBP12.73□□□□□ -0.37
CYCSP55-201ENST00000399027 PASKQ96RG2 1323 aa12.73□□□□□ -0.37
CYCSP55-201ENST00000399027 MX1P20591 662 aa12.73□□□□□ -0.37
CYCSP55-201ENST00000399027 MECOMQ03112 1051 aa12.73□□□□□ -0.37
CYCSP55-201ENST00000399027 TTF1Q15361 905 aaPredicted RBP12.73□□□□□ -0.37
CYCSP55-201ENST00000399027 ANGEL2Q5VTE6 544 aaKnown RBP12.73□□□□□ -0.37
CYCSP55-201ENST00000399027 ERICH6BQ5W0A0 696 aa12.73□□□□□ -0.37
CYCSP55-201ENST00000399027 MAP1SQ66K74 1059 aaPredicted RBP12.73□□□□□ -0.37
CYCSP55-201ENST00000399027 B4GALNT3Q6L9W6 998 aa12.73□□□□□ -0.37
CYCSP55-201ENST00000399027 TMED8Q6PL24 325 aaPredicted RBP12.73□□□□□ -0.37
CYCSP55-201ENST00000399027 DZIP1Q86YF9 867 aaKnown RBP12.73□□□□□ -0.37
CYCSP55-201ENST00000399027 SLF2Q8IX21 1173 aa12.73□□□□□ -0.37
CYCSP55-201ENST00000399027 CNTROBQ8N137 903 aa12.73□□□□□ -0.37
CYCSP55-201ENST00000399027 PI4K2BQ8TCG2 481 aa12.73□□□□□ -0.37
CYCSP55-201ENST00000399027 OTUD7AQ8TE49 926 aaPredicted RBP12.73□□□□□ -0.37
CYCSP55-201ENST00000399027 NSUN4Q96CB9 384 aaKnown RBP12.73□□□□□ -0.37
CYCSP55-201ENST00000399027 BCL11AQ9H165 835 aa12.73□□□□□ -0.37
CYCSP55-201ENST00000399027 BOLA2Q9H3K6 86 aa12.73□□□□□ -0.37
CYCSP55-201ENST00000399027 ANTXR1Q9H6X2 564 aa12.73□□□□□ -0.37
CYCSP55-201ENST00000399027 PIH1D3Q9NQM4 214 aaKnown RBP12.73□□□□□ -0.37
CYCSP55-201ENST00000399027 GGA3Q9NZ52 723 aa12.73□□□□□ -0.37
CYCSP55-201ENST00000399027 STAP2Q9UGK3 403 aa12.73□□□□□ -0.37
CYCSP55-201ENST00000399027 NDUFB9Q9Y6M9 179 aa12.73□□□□□ -0.37
CYCSP55-201ENST00000399027 MROH7-TTC4A0A0A0MT08 1334 aa12.72□□□□□ -0.37
CYCSP55-201ENST00000399027 AOX1Q06278 1338 aa12.72□□□□□ -0.37
CYCSP55-201ENST00000399027 MYO1BO43795 1136 aa12.72□□□□□ -0.37
CYCSP55-201ENST00000399027 ATXN8OSP0DMR3 200 aa12.72□□□□□ -0.37
CYCSP55-201ENST00000399027 RBM5P52756 815 aaKnown RBP eCLIP12.72□□□□□ -0.37
CYCSP55-201ENST00000399027 C1QTNF8P60827 252 aa12.72□□□□□ -0.37
CYCSP55-201ENST00000399027 DIXDC1Q155Q3 683 aa12.72□□□□□ -0.37
CYCSP55-201ENST00000399027 SPDYE2Q495Y8 402 aa12.72□□□□□ -0.37
CYCSP55-201ENST00000399027 APOBEC3HQ6NTF7 200 aaKnown RBP12.72□□□□□ -0.37
CYCSP55-201ENST00000399027 CDC37L1Q7L3B6 337 aa12.72□□□□□ -0.37
CYCSP55-201ENST00000399027 DCPSQ96C86 337 aaKnown RBP12.72□□□□□ -0.37
CYCSP55-201ENST00000399027 LNPKQ9C0E8 428 aa12.72□□□□□ -0.37
CYCSP55-201ENST00000399027 LRP2BPQ9P2M1 347 aa12.72□□□□□ -0.37
CYCSP55-201ENST00000399027 DAGLAQ9Y4D2 1042 aa12.72□□□□□ -0.37
CYCSP55-201ENST00000399027 ERC2O15083 957 aa12.71□□□□□ -0.37
CYCSP55-201ENST00000399027 GLRX3O76003 335 aaKnown RBP12.71□□□□□ -0.37
CYCSP55-201ENST00000399027 GSTO1P78417 241 aa12.71□□□□□ -0.37
CYCSP55-201ENST00000399027 APOBEC3FQ8IUX4 373 aaKnown RBP12.71□□□□□ -0.37
CYCSP55-201ENST00000399027 DNAJC2Q99543 621 aaKnown RBP12.71□□□□□ -0.37
CYCSP55-201ENST00000399027 OSBPL3Q9H4L5 887 aa12.71□□□□□ -0.37
CYCSP55-201ENST00000399027 PAG1Q9NWQ8 432 aa12.71□□□□□ -0.37
CYCSP55-201ENST00000399027 RAI14Q9P0K7 980 aa12.71□□□□□ -0.37
CYCSP55-201ENST00000399027 PAPPA2Q9BXP8 1791 aa12.71□□□□□ -0.38
CYCSP55-201ENST00000399027 GPR75-ASB3A0A0A6YYF3 556 aa12.7□□□□□ -0.38
CYCSP55-201ENST00000399027 GOLIM4O00461 696 aa12.7□□□□□ -0.38
CYCSP55-201ENST00000399027 LDHCP07864 332 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms