RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 CIAO1O76071 339 aa16.71■□□□□ 0.27
VCX3A-202ENST00000398729 SLC5A1P13866 664 aa16.71■□□□□ 0.27
VCX3A-202ENST00000398729 TRIM27P14373 513 aa16.71■□□□□ 0.27
VCX3A-202ENST00000398729 FGFR2P21802 821 aa16.71■□□□□ 0.27
VCX3A-202ENST00000398729 CHAF1AQ13111 956 aaPredicted RBP16.71■□□□□ 0.27
VCX3A-202ENST00000398729 ATF7IPQ6VMQ6 1270 aa16.71■□□□□ 0.27
VCX3A-202ENST00000398729 ATG9AQ7Z3C6 839 aa16.71■□□□□ 0.27
VCX3A-202ENST00000398729 TBC1D22AQ8WUA7 517 aa16.71■□□□□ 0.27
VCX3A-202ENST00000398729 PRMT6Q96LA8 375 aaPredicted RBP16.71■□□□□ 0.27
VCX3A-202ENST00000398729 SIL1Q9H173 461 aa16.71■□□□□ 0.27
VCX3A-202ENST00000398729 SERPINA10Q9UK55 444 aa16.71■□□□□ 0.27
VCX3A-202ENST00000398729 PCDHAC2Q9Y5I4 1007 aa16.71■□□□□ 0.27
VCX3A-202ENST00000398729 CLRN2A0PK11 232 aa16.7■□□□□ 0.26
VCX3A-202ENST00000398729 FKTNO75072 461 aa16.7■□□□□ 0.26
VCX3A-202ENST00000398729 BCAMP50895 628 aa16.7■□□□□ 0.26
VCX3A-202ENST00000398729 PRKG1Q13976 671 aa16.7■□□□□ 0.26
VCX3A-202ENST00000398729 LPIN2Q92539 896 aa16.7■□□□□ 0.26
VCX3A-202ENST00000398729 DEFB129Q9H1M3 183 aa16.7■□□□□ 0.26
VCX3A-202ENST00000398729 CEP126Q9P2H0 1117 aa16.7■□□□□ 0.26
VCX3A-202ENST00000398729 FZD1Q9UP38 647 aa16.7■□□□□ 0.26
VCX3A-202ENST00000398729 PPP2R3BQ9Y5P8 575 aa16.7■□□□□ 0.26
VCX3A-202ENST00000398729 KIAA0100Q14667 2235 aaKnown RBP16.7■□□□□ 0.26
VCX3A-202ENST00000398729 BRCA2P51587 3418 aa16.7■□□□□ 0.26
VCX3A-202ENST00000398729 SPRYD7Q5W111 196 aa16.69■□□□□ 0.26
VCX3A-202ENST00000398729 ARMC9Q7Z3E5 817 aa16.69■□□□□ 0.26
VCX3A-202ENST00000398729 VEZTQ9HBM0 779 aa16.69■□□□□ 0.26
VCX3A-202ENST00000398729 IL15P40933 162 aaPredicted RBP16.68■□□□□ 0.26
VCX3A-202ENST00000398729 SREBF2Q12772 1141 aa16.68■□□□□ 0.26
VCX3A-202ENST00000398729 ZKSCAN2Q63HK3 967 aa16.68■□□□□ 0.26
VCX3A-202ENST00000398729 CLUAP1Q96AJ1 413 aa16.68■□□□□ 0.26
VCX3A-202ENST00000398729 COPRSQ9NQ92 184 aa16.68■□□□□ 0.26
VCX3A-202ENST00000398729 CRKP46108 304 aa16.67■□□□□ 0.26
VCX3A-202ENST00000398729 HDLBPQ00341 1268 aaKnown RBP16.67■□□□□ 0.26
VCX3A-202ENST00000398729 TNFAIP1Q13829 316 aa16.67■□□□□ 0.26
VCX3A-202ENST00000398729 ATP2B3Q16720 1220 aa16.67■□□□□ 0.26
VCX3A-202ENST00000398729 PA2G4Q9UQ80 394 aaKnown RBP16.67■□□□□ 0.26
VCX3A-202ENST00000398729 TNNQ9UQP3 1299 aa16.67■□□□□ 0.26
VCX3A-202ENST00000398729 ZBED9Q6R2W3 1325 aa16.67■□□□□ 0.26
VCX3A-202ENST00000398729 MYH13Q9UKX3 1938 aa16.66■□□□□ 0.26
VCX3A-202ENST00000398729 SRGAP3O43295 1099 aa16.66■□□□□ 0.26
VCX3A-202ENST00000398729 MTX1Q13505 466 aa16.66■□□□□ 0.26
VCX3A-202ENST00000398729 SUPT20HL1Q3ZLR7 823 aa16.66■□□□□ 0.26
VCX3A-202ENST00000398729 SPDYE2Q495Y8 402 aa16.66■□□□□ 0.26
VCX3A-202ENST00000398729 DZIP1LQ8IYY4 767 aaKnown RBP16.66■□□□□ 0.26
VCX3A-202ENST00000398729 TDRD3Q9H7E2 651 aaKnown RBP16.66■□□□□ 0.26
VCX3A-202ENST00000398729 ZNF70Q9UC06 446 aaPredicted RBP16.66■□□□□ 0.26
VCX3A-202ENST00000398729 ANGEL1Q9UNK9 670 aaKnown RBP16.66■□□□□ 0.26
VCX3A-202ENST00000398729 SUGT1Q9Y2Z0 365 aa16.66■□□□□ 0.26
VCX3A-202ENST00000398729 AOX1Q06278 1338 aa16.66■□□□□ 0.26
VCX3A-202ENST00000398729 POTEFA5A3E0 1075 aa16.65■□□□□ 0.26
VCX3A-202ENST00000398729 PPP1R12BO60237 982 aaPredicted RBP16.65■□□□□ 0.26
VCX3A-202ENST00000398729 GNAI2P04899 355 aa16.65■□□□□ 0.26
VCX3A-202ENST00000398729 RASA3Q14644 834 aa16.65■□□□□ 0.26
VCX3A-202ENST00000398729 GRIK5Q16478 980 aa16.65■□□□□ 0.26
VCX3A-202ENST00000398729 IFNL1Q8IU54 200 aa16.65■□□□□ 0.26
VCX3A-202ENST00000398729 WDR66Q8TBY9 1149 aa16.65■□□□□ 0.26
VCX3A-202ENST00000398729 TEKT1Q969V4 418 aa16.65■□□□□ 0.26
VCX3A-202ENST00000398729 SLC10A4Q96EP9 437 aa16.65■□□□□ 0.26
VCX3A-202ENST00000398729 GNL3LQ9NVN8 582 aaKnown RBP16.65■□□□□ 0.26
VCX3A-202ENST00000398729 MAST3O60307 1309 aa16.65■□□□□ 0.26
VCX3A-202ENST00000398729 IGF2BP3O00425 579 aaKnown RBP eCLIP16.64■□□□□ 0.25
VCX3A-202ENST00000398729 INHBEP58166 350 aa16.64■□□□□ 0.25
VCX3A-202ENST00000398729 MAP3K11Q16584 847 aa16.64■□□□□ 0.25
VCX3A-202ENST00000398729 OTOP1Q7RTM1 612 aa16.64■□□□□ 0.25
VCX3A-202ENST00000398729 TMEM57Q8N5G2 664 aa16.64■□□□□ 0.25
VCX3A-202ENST00000398729 CLMNQ96JQ2 1002 aa16.64■□□□□ 0.25
VCX3A-202ENST00000398729 CEP290O15078 2479 aa16.63■□□□□ 0.25
VCX3A-202ENST00000398729 ALDH1A1P00352 501 aa16.63■□□□□ 0.25
VCX3A-202ENST00000398729 TNNI2P48788 182 aa16.63■□□□□ 0.25
VCX3A-202ENST00000398729 CAP1Q01518 475 aa16.63■□□□□ 0.25
VCX3A-202ENST00000398729 MRIQ9BWK5 157 aa16.63■□□□□ 0.25
VCX3A-202ENST00000398729 TRIM17Q9Y577 477 aa16.63■□□□□ 0.25
VCX3A-202ENST00000398729 MANSC4A6NHS7 340 aaPredicted RBP16.62■□□□□ 0.25
VCX3A-202ENST00000398729 HABP4Q5JVS0 413 aaKnown RBP16.62■□□□□ 0.25
VCX3A-202ENST00000398729 NBPF12Q5TAG4 269 aaPredicted RBP16.62■□□□□ 0.25
VCX3A-202ENST00000398729 FTSJ3Q8IY81 847 aaKnown RBP16.62■□□□□ 0.25
VCX3A-202ENST00000398729 ZDHHC15Q96MV8 337 aa16.62■□□□□ 0.25
VCX3A-202ENST00000398729 AKAP2Q9Y2D5 859 aa16.62■□□□□ 0.25
VCX3A-202ENST00000398729 SSC5DA1L4H1 1573 aa16.62■□□□□ 0.25
VCX3A-202ENST00000398729 UNCXA6NJT0 531 aa16.61■□□□□ 0.25
VCX3A-202ENST00000398729 TCP10L2B9ZVM9 353 aa16.61■□□□□ 0.25
VCX3A-202ENST00000398729 SEMA3EO15041 775 aa16.61■□□□□ 0.25
VCX3A-202ENST00000398729 GJA5P36382 358 aa16.61■□□□□ 0.25
VCX3A-202ENST00000398729 IREB2P48200 963 aaKnown RBP16.61■□□□□ 0.25
VCX3A-202ENST00000398729 WNK4Q96J92 1243 aa16.61■□□□□ 0.25
VCX3A-202ENST00000398729 TMOD2Q9NZR1 351 aa16.61■□□□□ 0.25
VCX3A-202ENST00000398729 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.61■□□□□ 0.25
VCX3A-202ENST00000398729 DENND2AQ9ULE3 1009 aa16.61■□□□□ 0.25
VCX3A-202ENST00000398729 ZBTB48P10074 688 aaPredicted RBP16.6■□□□□ 0.25
VCX3A-202ENST00000398729 PHKA1P46020 1223 aa16.6■□□□□ 0.25
VCX3A-202ENST00000398729 HHIPL2Q6UWX4 724 aa16.6■□□□□ 0.25
VCX3A-202ENST00000398729 GCC1Q96CN9 775 aa16.6■□□□□ 0.25
VCX3A-202ENST00000398729 PTPN18Q99952 460 aa16.6■□□□□ 0.25
VCX3A-202ENST00000398729 PTPN22Q9Y2R2 807 aa16.6■□□□□ 0.25
VCX3A-202ENST00000398729 PNMA6EA0A0J9YXQ4 647 aa16.59■□□□□ 0.25
VCX3A-202ENST00000398729 A0A1B0GUL7 405 aa16.59■□□□□ 0.25
VCX3A-202ENST00000398729 USP2O75604 605 aaPredicted RBP16.59■□□□□ 0.25
VCX3A-202ENST00000398729 ADORA1P30542 326 aa16.59■□□□□ 0.25
VCX3A-202ENST00000398729 TIMM10P62072 90 aa16.59■□□□□ 0.25
VCX3A-202ENST00000398729 TFCP2Q12800 502 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms