RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.22■□□□□ 0.19
PCDHGA11-201ENST00000398587 A2ML1A8K2U0 1454 aa16.22■□□□□ 0.19
PCDHGA11-201ENST00000398587 EDC3Q96F86 508 aaKnown RBP16.22■□□□□ 0.19
PCDHGA11-201ENST00000398587 NCOA5Q9HCD5 579 aaKnown RBP16.22■□□□□ 0.19
PCDHGA11-201ENST00000398587 FBXO3Q9UK99 471 aa16.22■□□□□ 0.19
PCDHGA11-201ENST00000398587 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.22■□□□□ 0.19
PCDHGA11-201ENST00000398587 TAF5LO75529 589 aa16.22■□□□□ 0.19
PCDHGA11-201ENST00000398587 DEXIO95424 95 aa16.22■□□□□ 0.19
PCDHGA11-201ENST00000398587 CCDC102AQ96A19 550 aa16.22■□□□□ 0.19
PCDHGA11-201ENST00000398587 CRACR2AQ9BSW2 395 aa16.22■□□□□ 0.19
PCDHGA11-201ENST00000398587 TTC12Q9H892 705 aaPredicted RBP16.22■□□□□ 0.19
PCDHGA11-201ENST00000398587 PARP3Q9Y6F1 533 aa16.22■□□□□ 0.19
PCDHGA11-201ENST00000398587 BRD1O95696 1058 aa16.22■□□□□ 0.19
PCDHGA11-201ENST00000398587 ENOX2Q16206 610 aaKnown RBP16.22■□□□□ 0.19
PCDHGA11-201ENST00000398587 MAP9Q49MG5 647 aa16.22■□□□□ 0.19
PCDHGA11-201ENST00000398587 CEP135Q66GS9 1140 aa16.22■□□□□ 0.19
PCDHGA11-201ENST00000398587 GNG11P61952 73 aa16.21■□□□□ 0.19
PCDHGA11-201ENST00000398587 RBM17Q96I25 401 aaKnown RBP16.21■□□□□ 0.19
PCDHGA11-201ENST00000398587 JAG2Q9Y219 1238 aa16.21■□□□□ 0.19
PCDHGA11-201ENST00000398587 PCCAP05165 728 aaPredicted RBP16.21■□□□□ 0.19
PCDHGA11-201ENST00000398587 MCM3P25205 808 aa16.21■□□□□ 0.19
PCDHGA11-201ENST00000398587 SPATA5Q8NB90 893 aa16.21■□□□□ 0.19
PCDHGA11-201ENST00000398587 BCORL1Q5H9F3 1711 aa16.21■□□□□ 0.19
PCDHGA11-201ENST00000398587 TBCAO75347 108 aaKnown RBP16.21■□□□□ 0.19
PCDHGA11-201ENST00000398587 CETN2P41208 172 aa16.21■□□□□ 0.19
PCDHGA11-201ENST00000398587 FAM173BQ6P4H8 233 aa16.21■□□□□ 0.19
PCDHGA11-201ENST00000398587 IQUBQ8NA54 791 aa16.21■□□□□ 0.19
PCDHGA11-201ENST00000398587 CGNQ9P2M7 1197 aaKnown RBP16.21■□□□□ 0.19
PCDHGA11-201ENST00000398587 ERBB3P21860 1342 aa16.21■□□□□ 0.18
PCDHGA11-201ENST00000398587 H0YHG0 523 aa16.2■□□□□ 0.18
PCDHGA11-201ENST00000398587 TRIM21P19474 475 aaKnown RBP16.2■□□□□ 0.18
PCDHGA11-201ENST00000398587 ASIC1P78348 528 aa16.2■□□□□ 0.18
PCDHGA11-201ENST00000398587 TEX11Q8IYF3 940 aa16.2■□□□□ 0.18
PCDHGA11-201ENST00000398587 WDR66Q8TBY9 1149 aa16.2■□□□□ 0.18
PCDHGA11-201ENST00000398587 CARD10Q9BWT7 1032 aa16.2■□□□□ 0.18
PCDHGA11-201ENST00000398587 ELP1O95163 1332 aa16.2■□□□□ 0.18
PCDHGA11-201ENST00000398587 A0A1B0GVL5 298 aa16.2■□□□□ 0.18
PCDHGA11-201ENST00000398587 CTSWP56202 376 aa16.2■□□□□ 0.18
PCDHGA11-201ENST00000398587 PROSER3Q2NL68 480 aa16.2■□□□□ 0.18
PCDHGA11-201ENST00000398587 GTPBP4Q9BZE4 634 aaKnown RBP16.2■□□□□ 0.18
PCDHGA11-201ENST00000398587 ZNF532Q9HCE3 1301 aa16.2■□□□□ 0.18
PCDHGA11-201ENST00000398587 ZNF445P59923 1031 aa16.2■□□□□ 0.18
PCDHGA11-201ENST00000398587 HSP90AA4PQ58FG1 418 aa16.2■□□□□ 0.18
PCDHGA11-201ENST00000398587 ANO1Q5XXA6 986 aa16.2■□□□□ 0.18
PCDHGA11-201ENST00000398587 ZBTB38Q8NAP3 1195 aaPredicted RBP16.2■□□□□ 0.18
PCDHGA11-201ENST00000398587 PPP2R5BQ15173 497 aa16.2■□□□□ 0.18
PCDHGA11-201ENST00000398587 FAM98CQ17RN3 349 aaKnown RBP16.2■□□□□ 0.18
PCDHGA11-201ENST00000398587 A0A0D9SFI3 127 aa16.19■□□□□ 0.18
PCDHGA11-201ENST00000398587 SPHKAPQ2M3C7 1700 aa16.19■□□□□ 0.18
PCDHGA11-201ENST00000398587 KRT79Q5XKE5 535 aa16.19■□□□□ 0.18
PCDHGA11-201ENST00000398587 DTHD1Q6ZMT9 781 aa16.19■□□□□ 0.18
PCDHGA11-201ENST00000398587 ALS2CR12Q96Q35 445 aa16.19■□□□□ 0.18
PCDHGA11-201ENST00000398587 HAUS7Q99871 368 aa16.19■□□□□ 0.18
PCDHGA11-201ENST00000398587 LMBRD1Q9NUN5 540 aa16.19■□□□□ 0.18
PCDHGA11-201ENST00000398587 E7EWF7 191 aa16.19■□□□□ 0.18
PCDHGA11-201ENST00000398587 DYNC1I1O14576 645 aa16.19■□□□□ 0.18
PCDHGA11-201ENST00000398587 UFL1O94874 794 aa16.19■□□□□ 0.18
PCDHGA11-201ENST00000398587 CERS3Q8IU89 383 aa16.19■□□□□ 0.18
PCDHGA11-201ENST00000398587 PALD1Q9ULE6 856 aa16.19■□□□□ 0.18
PCDHGA11-201ENST00000398587 CROCC2H7BZ55 1655 aa16.19■□□□□ 0.18
PCDHGA11-201ENST00000398587 RIMBP2O15034 1052 aa16.18■□□□□ 0.18
PCDHGA11-201ENST00000398587 AKR1B10O60218 316 aa16.18■□□□□ 0.18
PCDHGA11-201ENST00000398587 FAM193AP78312 1265 aa16.18■□□□□ 0.18
PCDHGA11-201ENST00000398587 PTH1RQ03431 593 aa16.18■□□□□ 0.18
PCDHGA11-201ENST00000398587 LEO1Q8WVC0 666 aaPredicted RBP16.18■□□□□ 0.18
PCDHGA11-201ENST00000398587 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.18■□□□□ 0.18
PCDHGA11-201ENST00000398587 CENPHQ9H3R5 247 aa16.18■□□□□ 0.18
PCDHGA11-201ENST00000398587 SAMM50Q9Y512 469 aa16.18■□□□□ 0.18
PCDHGA11-201ENST00000398587 ANKARQ7Z5J8 1434 aa16.18■□□□□ 0.18
PCDHGA11-201ENST00000398587 DESP17661 470 aa16.18■□□□□ 0.18
PCDHGA11-201ENST00000398587 RBSNQ9H1K0 784 aa16.18■□□□□ 0.18
PCDHGA11-201ENST00000398587 PATL2C9JE40 543 aaKnown RBP16.18■□□□□ 0.18
PCDHGA11-201ENST00000398587 LUZP1Q86V48 1076 aa16.18■□□□□ 0.18
PCDHGA11-201ENST00000398587 EHBP1Q8NDI1 1231 aa16.18■□□□□ 0.18
PCDHGA11-201ENST00000398587 CPSF1Q10570 1443 aaKnown RBP16.18■□□□□ 0.18
PCDHGA11-201ENST00000398587 MCM7P33993 719 aa16.18■□□□□ 0.18
PCDHGA11-201ENST00000398587 TUBB4AP04350 444 aa16.17■□□□□ 0.18
PCDHGA11-201ENST00000398587 TNNI2P48788 182 aa16.17■□□□□ 0.18
PCDHGA11-201ENST00000398587 SYCP3Q8IZU3 236 aa16.17■□□□□ 0.18
PCDHGA11-201ENST00000398587 POTEB2H3BUK9 544 aa16.17■□□□□ 0.18
PCDHGA11-201ENST00000398587 ME3Q16798 604 aa16.17■□□□□ 0.18
PCDHGA11-201ENST00000398587 WDR78Q5VTH9 848 aa16.17■□□□□ 0.18
PCDHGA11-201ENST00000398587 DIS3L2Q8IYB7 885 aaKnown RBP16.17■□□□□ 0.18
PCDHGA11-201ENST00000398587 SMARCC2Q8TAQ2 1214 aa16.17■□□□□ 0.18
PCDHGA11-201ENST00000398587 CDC42BPBQ9Y5S2 1711 aa16.17■□□□□ 0.18
PCDHGA11-201ENST00000398587 CYLC1P35663 651 aaPredicted RBP16.17■□□□□ 0.18
PCDHGA11-201ENST00000398587 TSPYL1Q9H0U9 437 aa16.17■□□□□ 0.18
PCDHGA11-201ENST00000398587 ZSWIM6Q9HCJ5 1215 aa16.17■□□□□ 0.18
PCDHGA11-201ENST00000398587 GGA1Q9UJY5 639 aa16.17■□□□□ 0.18
PCDHGA11-201ENST00000398587 PARP1P09874 1014 aaKnown RBP16.17■□□□□ 0.18
PCDHGA11-201ENST00000398587 SSR1P43307 286 aaKnown RBP16.17■□□□□ 0.18
PCDHGA11-201ENST00000398587 CLSTN2Q9H4D0 955 aa16.17■□□□□ 0.18
PCDHGA11-201ENST00000398587 MYL5Q02045 173 aa16.16■□□□□ 0.18
PCDHGA11-201ENST00000398587 GTF3C6Q969F1 213 aa16.16■□□□□ 0.18
PCDHGA11-201ENST00000398587 JAK2O60674 1132 aa16.16■□□□□ 0.18
PCDHGA11-201ENST00000398587 PRDM1O75626 825 aa16.16■□□□□ 0.18
PCDHGA11-201ENST00000398587 RPS8P62241 208 aaKnown RBP16.16■□□□□ 0.18
PCDHGA11-201ENST00000398587 MAP3K15Q6ZN16 1313 aa16.16■□□□□ 0.18
PCDHGA11-201ENST00000398587 WDR17Q8IZU2 1322 aa16.16■□□□□ 0.18
PCDHGA11-201ENST00000398587 SPDYE3A6NKU9 549 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms