RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 NDC80O14777 642 aa13.27□□□□□ -0.28
TMF1-201ENST00000398559 TFCP2Q12800 502 aa13.27□□□□□ -0.28
TMF1-201ENST00000398559 ZNF622Q969S3 477 aaKnown RBP eCLIP13.27□□□□□ -0.287e-7■■■□□ 18.8
TMF1-201ENST00000398559 NAPGQ99747 312 aaPredicted RBP13.27□□□□□ -0.28
TMF1-201ENST00000398559 ATP2A2P16615 1042 aaKnown RBP13.27□□□□□ -0.28
TMF1-201ENST00000398559 GNAT2P19087 354 aa13.27□□□□□ -0.28
TMF1-201ENST00000398559 RFC4P35249 363 aa13.27□□□□□ -0.28
TMF1-201ENST00000398559 INTS8Q75QN2 995 aaKnown RBP13.27□□□□□ -0.28
TMF1-201ENST00000398559 IQUBQ8NA54 791 aa13.27□□□□□ -0.28
TMF1-201ENST00000398559 MIGA1Q8NAN2 632 aa13.27□□□□□ -0.28
TMF1-201ENST00000398559 KIAA0586Q9BVV6 1533 aa13.27□□□□□ -0.29
TMF1-201ENST00000398559 ST5P78524 1137 aa13.27□□□□□ -0.29
TMF1-201ENST00000398559 FAM160A1Q05DH4 1040 aa13.27□□□□□ -0.29
TMF1-201ENST00000398559 SEL1L2Q5TEA6 688 aa13.27□□□□□ -0.29
TMF1-201ENST00000398559 VWA3AA6NCI4 1184 aa13.27□□□□□ -0.29
TMF1-201ENST00000398559 CALCOCO2Q13137 446 aa13.27□□□□□ -0.29
TMF1-201ENST00000398559 IGSF22Q8N9C0 903 aa13.27□□□□□ -0.29
TMF1-201ENST00000398559 MTUS1Q9ULD2 1270 aa13.27□□□□□ -0.29
TMF1-201ENST00000398559 CCDC26Q8TAB7 109 aa13.27□□□□□ -0.29
TMF1-201ENST00000398559 SPDYE3A6NKU9 549 aa13.26□□□□□ -0.29
TMF1-201ENST00000398559 NOL3O60936 208 aaKnown RBP13.26□□□□□ -0.29
TMF1-201ENST00000398559 TRIM7Q9C029 511 aa13.26□□□□□ -0.29
TMF1-201ENST00000398559 TPD52P55327 224 aaPredicted RBP13.26□□□□□ -0.29
TMF1-201ENST00000398559 ZBTB40Q9NUA8 1239 aa13.26□□□□□ -0.29
TMF1-201ENST00000398559 TXNDC16Q9P2K2 825 aa13.26□□□□□ -0.29
TMF1-201ENST00000398559 PLB1Q6P1J6 1458 aa13.26□□□□□ -0.29
TMF1-201ENST00000398559 ZNF174Q15697 407 aa13.26□□□□□ -0.29
TMF1-201ENST00000398559 CHRNA2Q15822 529 aa13.26□□□□□ -0.29
TMF1-201ENST00000398559 B4GALNT4Q76KP1 1039 aa13.26□□□□□ -0.29
TMF1-201ENST00000398559 TSPYL6Q8N831 410 aa13.26□□□□□ -0.29
TMF1-201ENST00000398559 TRAF1Q13077 416 aa13.26□□□□□ -0.29
TMF1-201ENST00000398559 HS2ST1Q7LGA3 356 aa13.26□□□□□ -0.29
TMF1-201ENST00000398559 TCHPQ9BT92 498 aa13.26□□□□□ -0.29
TMF1-201ENST00000398559 NOC4LQ9BVI4 516 aaKnown RBP13.26□□□□□ -0.29
TMF1-201ENST00000398559 VPS16Q9H269 839 aa13.26□□□□□ -0.29
TMF1-201ENST00000398559 CFAP157Q5JU67 520 aa13.26□□□□□ -0.29
TMF1-201ENST00000398559 ATL3Q6DD88 541 aa13.26□□□□□ -0.29
TMF1-201ENST00000398559 ZKSCAN3Q9BRR0 538 aa13.26□□□□□ -0.29
TMF1-201ENST00000398559 CD109Q6YHK3 1445 aa13.25□□□□□ -0.29
TMF1-201ENST00000398559 C17orf53Q8N3J3 647 aaPredicted RBP13.25□□□□□ -0.29
TMF1-201ENST00000398559 ATP11AP98196 1134 aa13.25□□□□□ -0.29
TMF1-201ENST00000398559 JAKMIP2Q96AA8 810 aa13.25□□□□□ -0.29
TMF1-201ENST00000398559 NKIRAS1Q9NYS0 192 aa13.25□□□□□ -0.29
TMF1-201ENST00000398559 CC2D2AQ9P2K1 1620 aa13.25□□□□□ -0.29
TMF1-201ENST00000398559 CUL7Q14999 1698 aa13.25□□□□□ -0.29
TMF1-201ENST00000398559 ELF2Q15723 593 aa13.25□□□□□ -0.29
TMF1-201ENST00000398559 CWF19L2Q2TBE0 894 aaKnown RBP13.25□□□□□ -0.29
TMF1-201ENST00000398559 STMN2Q93045 179 aa13.25□□□□□ -0.29
TMF1-201ENST00000398559 CARD6Q9BX69 1037 aa13.25□□□□□ -0.29
TMF1-201ENST00000398559 UAP1Q16222 522 aaPredicted RBP13.25□□□□□ -0.29
TMF1-201ENST00000398559 CYP26C1Q6V0L0 522 aa13.25□□□□□ -0.29
TMF1-201ENST00000398559 MSH6P52701 1360 aa13.25□□□□□ -0.29
TMF1-201ENST00000398559 RPS6KB1P23443 525 aa13.25□□□□□ -0.29
TMF1-201ENST00000398559 RNASE9P60153 205 aaKnown RBP13.25□□□□□ -0.29
TMF1-201ENST00000398559 PPFIBP2Q8ND30 876 aa13.25□□□□□ -0.29
TMF1-201ENST00000398559 VAMP4O75379 141 aa13.24□□□□□ -0.29
TMF1-201ENST00000398559 AKAP4Q5JQC9 854 aa13.24□□□□□ -0.29
TMF1-201ENST00000398559 UTP14CQ5TAP6 766 aaKnown RBP13.24□□□□□ -0.29
TMF1-201ENST00000398559 C8orf74Q6P047 294 aa13.24□□□□□ -0.29
TMF1-201ENST00000398559 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.24□□□□□ -0.29
TMF1-201ENST00000398559 RBM28Q9NW13 759 aaKnown RBP13.24□□□□□ -0.29
TMF1-201ENST00000398559 MCM9Q9NXL9 1143 aa13.24□□□□□ -0.29
TMF1-201ENST00000398559 ZRANB1Q9UGI0 708 aa13.24□□□□□ -0.29
TMF1-201ENST00000398559 ZBTB21Q9ULJ3 1066 aa13.24□□□□□ -0.29
TMF1-201ENST00000398559 RAD50Q92878 1312 aa13.24□□□□□ -0.29
TMF1-201ENST00000398559 CIB2O75838 187 aa13.24□□□□□ -0.29
TMF1-201ENST00000398559 ATP5DP30049 168 aa13.24□□□□□ -0.29
TMF1-201ENST00000398559 ALDH3A1P30838 453 aa13.24□□□□□ -0.29
TMF1-201ENST00000398559 SV2BQ7L1I2 683 aa13.24□□□□□ -0.29
TMF1-201ENST00000398559 FAM169AQ9Y6X4 670 aa13.24□□□□□ -0.29
TMF1-201ENST00000398559 GNA11P29992 359 aa13.24□□□□□ -0.29
TMF1-201ENST00000398559 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.24□□□□□ -0.29
TMF1-201ENST00000398559 PPIP5K1Q6PFW1 1433 aa13.23□□□□□ -0.29
TMF1-201ENST00000398559 PARD3Q8TEW0 1356 aa13.23□□□□□ -0.29
TMF1-201ENST00000398559 NDUFAB1O14561 156 aa13.23□□□□□ -0.29
TMF1-201ENST00000398559 ZNF75DP51815 510 aa13.23□□□□□ -0.29
TMF1-201ENST00000398559 TRIM14Q14142 442 aa13.23□□□□□ -0.29
TMF1-201ENST00000398559 EIF4A2Q14240 407 aaKnown RBP13.23□□□□□ -0.29
TMF1-201ENST00000398559 RABEP2Q9H5N1 569 aa13.23□□□□□ -0.29
TMF1-201ENST00000398559 GOLGA6CA6NDK9 693 aa13.23□□□□□ -0.29
TMF1-201ENST00000398559 GOLGA6DP0CG33 693 aa13.23□□□□□ -0.29
TMF1-201ENST00000398559 MAP3K9P80192 1104 aa13.23□□□□□ -0.29
TMF1-201ENST00000398559 FANCCQ00597 558 aa13.23□□□□□ -0.29
TMF1-201ENST00000398559 MAK16Q9BXY0 300 aaKnown RBP13.23□□□□□ -0.29
TMF1-201ENST00000398559 BICC1Q9H694 974 aaKnown RBP13.23□□□□□ -0.29
TMF1-201ENST00000398559 CBX8Q9HC52 389 aa13.23□□□□□ -0.29
TMF1-201ENST00000398559 GOLGA6AQ9NYA3 693 aa13.23□□□□□ -0.29
TMF1-201ENST00000398559 TTF2Q9UNY4 1162 aaKnown RBP13.23□□□□□ -0.29
TMF1-201ENST00000398559 MTHFSDQ2M296 383 aaKnown RBP13.23□□□□□ -0.29
TMF1-201ENST00000398559 CLSTN2Q9H4D0 955 aa13.23□□□□□ -0.29
TMF1-201ENST00000398559 SOS1Q07889 1333 aaPredicted RBP13.23□□□□□ -0.29
TMF1-201ENST00000398559 TBC1D8BQ0IIM8 1120 aa13.23□□□□□ -0.29
TMF1-201ENST00000398559 KRT24Q2M2I5 525 aa13.23□□□□□ -0.29
TMF1-201ENST00000398559 CEP85LQ5SZL2 805 aa13.23□□□□□ -0.29
TMF1-201ENST00000398559 IFT74Q96LB3 600 aa13.23□□□□□ -0.29
TMF1-201ENST00000398559 SWAP70Q9UH65 585 aa13.23□□□□□ -0.29
TMF1-201ENST00000398559 TRAF5O00463 557 aa13.23□□□□□ -0.29
TMF1-201ENST00000398559 ZNF804AQ7Z570 1209 aa13.23□□□□□ -0.29
TMF1-201ENST00000398559 CCDC65Q8IXS2 484 aa13.23□□□□□ -0.29
TMF1-201ENST00000398559 MYRIPQ8NFW9 859 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms