RNA–Protein interactions for RNA: ENST00000397893.3

SUMO3-202, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-202ENST00000397893 VGLL2Q8N8G2 317 aa8.63□□□□□ -1.03
SUMO3-202ENST00000397893 ZNF296Q8WUU4 475 aaPredicted RBP8.63□□□□□ -1.03
SUMO3-202ENST00000397893 SSH1Q8WYL5 1049 aa8.63□□□□□ -1.03
SUMO3-202ENST00000397893 CDCA7LQ96GN5 454 aa8.63□□□□□ -1.03
SUMO3-202ENST00000397893 CLMNQ96JQ2 1002 aa8.63□□□□□ -1.03
SUMO3-202ENST00000397893 USP44Q9H0E7 712 aa8.63□□□□□ -1.03
SUMO3-202ENST00000397893 BICC1Q9H694 974 aaKnown RBP8.63□□□□□ -1.03
SUMO3-202ENST00000397893 CNNM1Q9NRU3 951 aa8.63□□□□□ -1.03
SUMO3-202ENST00000397893 ANGEL1Q9UNK9 670 aaKnown RBP8.63□□□□□ -1.03
SUMO3-202ENST00000397893 CHMP3Q9Y3E7 222 aa8.63□□□□□ -1.03
SUMO3-202ENST00000397893 PPP2R3BQ9Y5P8 575 aa8.63□□□□□ -1.03
SUMO3-202ENST00000397893 COL1A1P02452 1464 aaPredicted RBP8.63□□□□□ -1.03
SUMO3-202ENST00000397893 SPEF2Q9C093 1822 aa8.62□□□□□ -1.03
SUMO3-202ENST00000397893 CLRN2A0PK11 232 aa8.62□□□□□ -1.03
SUMO3-202ENST00000397893 UNCXA6NJT0 531 aa8.62□□□□□ -1.03
SUMO3-202ENST00000397893 GPR25O00155 361 aa8.62□□□□□ -1.03
SUMO3-202ENST00000397893 PLIN1O60240 522 aa8.62□□□□□ -1.03
SUMO3-202ENST00000397893 HIBADHP31937 336 aaKnown RBP8.62□□□□□ -1.03
SUMO3-202ENST00000397893 GJA5P36382 358 aa8.62□□□□□ -1.03
SUMO3-202ENST00000397893 SLFN5Q08AF3 891 aa8.62□□□□□ -1.03
SUMO3-202ENST00000397893 PRKG1Q13976 671 aa8.62□□□□□ -1.03
SUMO3-202ENST00000397893 RASA3Q14644 834 aa8.62□□□□□ -1.03
SUMO3-202ENST00000397893 SPDYE2Q495Y8 402 aa8.62□□□□□ -1.03
SUMO3-202ENST00000397893 LRRC24Q50LG9 513 aa8.62□□□□□ -1.03
SUMO3-202ENST00000397893 CENPQQ7L2Z9 268 aaPredicted RBP8.62□□□□□ -1.03
SUMO3-202ENST00000397893 TRMT2AQ8IZ69 625 aaKnown RBP8.62□□□□□ -1.03
SUMO3-202ENST00000397893 TEPSINQ96N21 525 aa8.62□□□□□ -1.03
SUMO3-202ENST00000397893 SERPINA10Q9UK55 444 aa8.62□□□□□ -1.03
SUMO3-202ENST00000397893 PTPRCP08575 1304 aa8.61□□□□□ -1.03
SUMO3-202ENST00000397893 MROH5Q6ZUA9 1318 aa8.61□□□□□ -1.03
SUMO3-202ENST00000397893 TESPA1A2RU30 521 aaPredicted RBP8.61□□□□□ -1.03
SUMO3-202ENST00000397893 FGFR2P21802 821 aa8.61□□□□□ -1.03
SUMO3-202ENST00000397893 RFX5P48382 616 aaPredicted RBP8.61□□□□□ -1.03
SUMO3-202ENST00000397893 SREBF2Q12772 1141 aa8.61□□□□□ -1.03
SUMO3-202ENST00000397893 MKRN3Q13064 507 aaKnown RBP8.61□□□□□ -1.03
SUMO3-202ENST00000397893 SUPT20HL1Q3ZLR7 823 aa8.61□□□□□ -1.03
SUMO3-202ENST00000397893 TAF7LQ5H9L4 462 aa8.61□□□□□ -1.03
SUMO3-202ENST00000397893 MFSD14BQ5SR56 506 aa8.61□□□□□ -1.03
SUMO3-202ENST00000397893 CDAN1Q8IWY9 1227 aa8.61□□□□□ -1.03
SUMO3-202ENST00000397893 SLC10A4Q96EP9 437 aa8.61□□□□□ -1.03
SUMO3-202ENST00000397893 WNK4Q96J92 1243 aa8.61□□□□□ -1.03
SUMO3-202ENST00000397893 ZNF70Q9UC06 446 aaPredicted RBP8.61□□□□□ -1.03
SUMO3-202ENST00000397893 HPS5Q9UPZ3 1129 aa8.61□□□□□ -1.03
SUMO3-202ENST00000397893 HTTP42858 3142 aa8.61□□□□□ -1.03
SUMO3-202ENST00000397893 MANSC4A6NHS7 340 aaPredicted RBP8.6□□□□□ -1.03
SUMO3-202ENST00000397893 E9PSI1 815 aa8.6□□□□□ -1.03
SUMO3-202ENST00000397893 IGF2BP3O00425 579 aaKnown RBP eCLIP8.6□□□□□ -1.03
SUMO3-202ENST00000397893 PDE8BO95263 885 aa8.6□□□□□ -1.03
SUMO3-202ENST00000397893 ZBTB48P10074 688 aaPredicted RBP8.6□□□□□ -1.03
SUMO3-202ENST00000397893 INHBEP58166 350 aa8.6□□□□□ -1.03
SUMO3-202ENST00000397893 HDLBPQ00341 1268 aaKnown RBP8.6□□□□□ -1.03
SUMO3-202ENST00000397893 PKN2Q16513 984 aaKnown RBP8.6□□□□□ -1.03
SUMO3-202ENST00000397893 IFNL1Q8IU54 200 aa8.6□□□□□ -1.03
SUMO3-202ENST00000397893 DZIP1LQ8IYY4 767 aaKnown RBP8.6□□□□□ -1.03
SUMO3-202ENST00000397893 KLHDC4Q8TBB5 520 aa8.6□□□□□ -1.03
SUMO3-202ENST00000397893 PTPN18Q99952 460 aa8.6□□□□□ -1.03
SUMO3-202ENST00000397893 TDRD3Q9H7E2 651 aaKnown RBP8.6□□□□□ -1.03
SUMO3-202ENST00000397893 VEZTQ9HBM0 779 aa8.6□□□□□ -1.03
SUMO3-202ENST00000397893 TTF2Q9UNY4 1162 aaKnown RBP8.6□□□□□ -1.03
SUMO3-202ENST00000397893 A0A1B0GUL6 1792 aa8.6□□□□□ -1.03
SUMO3-202ENST00000397893 MYO1BO43795 1136 aa8.59□□□□□ -1.03
SUMO3-202ENST00000397893 PPP1R12BO60237 982 aaPredicted RBP8.59□□□□□ -1.03
SUMO3-202ENST00000397893 FKTNO75072 461 aa8.59□□□□□ -1.03
SUMO3-202ENST00000397893 SLC34A2O95436 690 aa8.59□□□□□ -1.03
SUMO3-202ENST00000397893 CRKP46108 304 aa8.59□□□□□ -1.03
SUMO3-202ENST00000397893 BCAMP50895 628 aa8.59□□□□□ -1.03
SUMO3-202ENST00000397893 SOX10P56693 466 aa8.59□□□□□ -1.03
SUMO3-202ENST00000397893 CAP1Q01518 475 aa8.59□□□□□ -1.03
SUMO3-202ENST00000397893 APOBEC3HQ6NTF7 200 aaKnown RBP8.59□□□□□ -1.03
SUMO3-202ENST00000397893 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.59□□□□□ -1.03
SUMO3-202ENST00000397893 ATG9AQ7Z3C6 839 aa8.59□□□□□ -1.03
SUMO3-202ENST00000397893 MS4A4AQ96JQ5 239 aa8.59□□□□□ -1.03
SUMO3-202ENST00000397893 MRIQ9BWK5 157 aa8.59□□□□□ -1.03
SUMO3-202ENST00000397893 IQSEC3Q9UPP2 1182 aaPredicted RBP8.59□□□□□ -1.03
SUMO3-202ENST00000397893 AKAP11Q9UKA4 1901 aa8.58□□□□□ -1.04
SUMO3-202ENST00000397893 KIF16BQ96L93 1317 aa8.58□□□□□ -1.04
SUMO3-202ENST00000397893 ALDH1A1P00352 501 aa8.58□□□□□ -1.04
SUMO3-202ENST00000397893 IREB2P48200 963 aaKnown RBP8.58□□□□□ -1.04
SUMO3-202ENST00000397893 RBM5P52756 815 aaKnown RBP eCLIP8.58□□□□□ -1.04
SUMO3-202ENST00000397893 ALDH1L2Q3SY69 923 aa8.58□□□□□ -1.04
SUMO3-202ENST00000397893 METTL24Q5JXM2 366 aa8.58□□□□□ -1.04
SUMO3-202ENST00000397893 FBXO46Q6PJ61 603 aaPredicted RBP8.58□□□□□ -1.04
SUMO3-202ENST00000397893 ANKRD13AQ8IZ07 590 aa8.58□□□□□ -1.04
SUMO3-202ENST00000397893 TMEM39BQ9GZU3 492 aa8.58□□□□□ -1.04
SUMO3-202ENST00000397893 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.58□□□□□ -1.04
SUMO3-202ENST00000397893 EYA2O00167 538 aa8.57□□□□□ -1.04
SUMO3-202ENST00000397893 PUM3Q15397 648 aaKnown RBP8.57□□□□□ -1.04
SUMO3-202ENST00000397893 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.57□□□□□ -1.04
SUMO3-202ENST00000397893 TBC1D22AQ8WUA7 517 aa8.57□□□□□ -1.04
SUMO3-202ENST00000397893 ZDHHC15Q96MV8 337 aa8.57□□□□□ -1.04
SUMO3-202ENST00000397893 SUGT1Q9Y2Z0 365 aa8.57□□□□□ -1.04
SUMO3-202ENST00000397893 KIAA0100Q14667 2235 aaKnown RBP8.56□□□□□ -1.04
SUMO3-202ENST00000397893 TCP10L2B9ZVM9 353 aa8.56□□□□□ -1.04
SUMO3-202ENST00000397893 CACNB3P54284 484 aa8.56□□□□□ -1.04
SUMO3-202ENST00000397893 MAP3K9P80192 1104 aa8.56□□□□□ -1.04
SUMO3-202ENST00000397893 CHAF1AQ13111 956 aaPredicted RBP8.56□□□□□ -1.04
SUMO3-202ENST00000397893 CRHR2Q13324 411 aa8.56□□□□□ -1.04
SUMO3-202ENST00000397893 TNFAIP1Q13829 316 aa8.56□□□□□ -1.04
SUMO3-202ENST00000397893 VGLL4Q14135 290 aa8.56□□□□□ -1.04
SUMO3-202ENST00000397893 CAVIN4Q5BKX8 364 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms