RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 SPDYE2BA6NHP3 402 aa12.15□□□□□ -0.46
NEDD9-203ENST00000397378 SPDYE6P0CI01 402 aa12.15□□□□□ -0.46
NEDD9-203ENST00000397378 RBM5P52756 815 aaKnown RBP eCLIP12.15□□□□□ -0.461e-19■■■■■ 58.1
NEDD9-203ENST00000397378 CCDC146Q8IYE0 955 aa12.15□□□□□ -0.46
NEDD9-203ENST00000397378 SLAIN1Q8ND83 568 aa12.15□□□□□ -0.46
NEDD9-203ENST00000397378 PRMT6Q96LA8 375 aaPredicted RBP12.15□□□□□ -0.46
NEDD9-203ENST00000397378 GUCD1Q96NT3 240 aa12.15□□□□□ -0.46
NEDD9-203ENST00000397378 DEFB118Q96PH6 123 aa12.15□□□□□ -0.46
NEDD9-203ENST00000397378 UBE2OQ9C0C9 1292 aaKnown RBP12.15□□□□□ -0.46
NEDD9-203ENST00000397378 MBIPQ9NS73 344 aa12.15□□□□□ -0.46
NEDD9-203ENST00000397378 BSDC1Q9NW68 430 aaPredicted RBP12.15□□□□□ -0.46
NEDD9-203ENST00000397378 RAPGEFL1Q9UHV5 662 aa12.15□□□□□ -0.46
NEDD9-203ENST00000397378 MINPP1Q9UNW1 487 aa12.15□□□□□ -0.46
NEDD9-203ENST00000397378 ZNF853P0CG23 659 aa12.14□□□□□ -0.47
NEDD9-203ENST00000397378 MAGEA10P43363 369 aaPredicted RBP12.14□□□□□ -0.47
NEDD9-203ENST00000397378 CTSWP56202 376 aa12.14□□□□□ -0.47
NEDD9-203ENST00000397378 MAP3K9P80192 1104 aa12.14□□□□□ -0.47
NEDD9-203ENST00000397378 PRKCZQ05513 592 aa12.14□□□□□ -0.47
NEDD9-203ENST00000397378 C17orf99Q6UX52 265 aa12.14□□□□□ -0.47
NEDD9-203ENST00000397378 NECAB2Q7Z6G3 386 aa12.14□□□□□ -0.47
NEDD9-203ENST00000397378 JARID2Q92833 1246 aaPredicted RBP12.14□□□□□ -0.47
NEDD9-203ENST00000397378 METTL22Q9BUU2 404 aaPredicted RBP12.14□□□□□ -0.47
NEDD9-203ENST00000397378 AOX1Q06278 1338 aa12.13□□□□□ -0.47
NEDD9-203ENST00000397378 MGAMO43451 1857 aa12.13□□□□□ -0.47
NEDD9-203ENST00000397378 KLRK1P26718 216 aa12.13□□□□□ -0.47
NEDD9-203ENST00000397378 SNAPC2Q13487 334 aa12.13□□□□□ -0.47
NEDD9-203ENST00000397378 TNFAIP1Q13829 316 aa12.13□□□□□ -0.47
NEDD9-203ENST00000397378 CERS5Q8N5B7 392 aa12.13□□□□□ -0.47
NEDD9-203ENST00000397378 TTLL11Q8NHH1 800 aa12.13□□□□□ -0.47
NEDD9-203ENST00000397378 LEMD3Q9Y2U8 911 aa12.13□□□□□ -0.47
NEDD9-203ENST00000397378 SPDYE5A6NIY4 337 aa12.12□□□□□ -0.47
NEDD9-203ENST00000397378 DDX58O95786 925 aaKnown RBP12.12□□□□□ -0.47
NEDD9-203ENST00000397378 INHAP05111 366 aa12.12□□□□□ -0.47
NEDD9-203ENST00000397378 CAPN2P17655 700 aa12.12□□□□□ -0.47
NEDD9-203ENST00000397378 PLA2G5P39877 138 aa12.12□□□□□ -0.47
NEDD9-203ENST00000397378 CDAN1Q8IWY9 1227 aa12.12□□□□□ -0.47
NEDD9-203ENST00000397378 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.12□□□□□ -0.47
NEDD9-203ENST00000397378 DIS3LQ8TF46 1054 aaKnown RBP12.12□□□□□ -0.47
NEDD9-203ENST00000397378 SYMPKQ92797 1274 aaKnown RBP12.12□□□□□ -0.47
NEDD9-203ENST00000397378 FAM122AQ96E09 287 aa12.12□□□□□ -0.47
NEDD9-203ENST00000397378 CACNA1FO60840 1977 aa12.12□□□□□ -0.47
NEDD9-203ENST00000397378 ARAP2Q8WZ64 1704 aa12.11□□□□□ -0.47
NEDD9-203ENST00000397378 A0A1B0GUL6 1792 aa12.11□□□□□ -0.47
NEDD9-203ENST00000397378 IRF6O14896 467 aa12.11□□□□□ -0.47
NEDD9-203ENST00000397378 ADCY3O60266 1144 aa12.11□□□□□ -0.47
NEDD9-203ENST00000397378 KCNJ4P48050 445 aa12.11□□□□□ -0.47
NEDD9-203ENST00000397378 FCGRTP55899 365 aa12.11□□□□□ -0.47
NEDD9-203ENST00000397378 ERO1BQ86YB8 467 aa12.11□□□□□ -0.47
NEDD9-203ENST00000397378 CHMP4AQ9BY43 222 aa12.11□□□□□ -0.47
NEDD9-203ENST00000397378 GREM2Q9H772 168 aa12.11□□□□□ -0.47
NEDD9-203ENST00000397378 CD209Q9NNX6 404 aa12.11□□□□□ -0.47
NEDD9-203ENST00000397378 IFT57Q9NWB7 429 aa12.11□□□□□ -0.47
NEDD9-203ENST00000397378 GABRQQ9UN88 632 aa12.11□□□□□ -0.47
NEDD9-203ENST00000397378 ADGRA2Q96PE1 1338 aa12.11□□□□□ -0.47
NEDD9-203ENST00000397378 MYBBP1AQ9BQG0 1328 aaKnown RBP12.11□□□□□ -0.47
NEDD9-203ENST00000397378 IGKV5-2P06315 115 aa12.1□□□□□ -0.47
NEDD9-203ENST00000397378 ELNP15502 786 aa12.1□□□□□ -0.47
NEDD9-203ENST00000397378 WDR43Q15061 677 aaKnown RBP eCLIP12.1□□□□□ -0.47
NEDD9-203ENST00000397378 ZNF697Q5TEC3 545 aa12.1□□□□□ -0.47
NEDD9-203ENST00000397378 MAFAQ8NHW3 353 aaPredicted RBP12.1□□□□□ -0.47
NEDD9-203ENST00000397378 ADAMTS8Q9UP79 889 aa12.1□□□□□ -0.47
NEDD9-203ENST00000397378 SNCAIPQ9Y6H5 919 aa12.1□□□□□ -0.47
NEDD9-203ENST00000397378 FAM205AQ6ZU69 1335 aa12.1□□□□□ -0.47
NEDD9-203ENST00000397378 TCP10L2B9ZVM9 353 aa12.09□□□□□ -0.47
NEDD9-203ENST00000397378 POTEB2H3BUK9 544 aa12.09□□□□□ -0.47
NEDD9-203ENST00000397378 PDHXO00330 501 aa12.09□□□□□ -0.47
NEDD9-203ENST00000397378 ELL2O00472 640 aaPredicted RBP12.09□□□□□ -0.47
NEDD9-203ENST00000397378 GNAI1P63096 354 aa12.09□□□□□ -0.47
NEDD9-203ENST00000397378 CCDC30Q5VVM6 783 aa12.09□□□□□ -0.47
NEDD9-203ENST00000397378 FAM109BQ6ICB4 259 aaPredicted RBP12.09□□□□□ -0.47
NEDD9-203ENST00000397378 TEPSINQ96N21 525 aa12.09□□□□□ -0.47
NEDD9-203ENST00000397378 WRNIP1Q96S55 665 aa12.09□□□□□ -0.47
NEDD9-203ENST00000397378 TMEM39BQ9GZU3 492 aa12.09□□□□□ -0.47
NEDD9-203ENST00000397378 ANKRD2Q9GZV1 360 aa12.09□□□□□ -0.47
NEDD9-203ENST00000397378 TDRD3Q9H7E2 651 aaKnown RBP12.09□□□□□ -0.47
NEDD9-203ENST00000397378 ZNF70Q9UC06 446 aaPredicted RBP12.09□□□□□ -0.47
NEDD9-203ENST00000397378 TAOK2Q9UL54 1235 aa12.09□□□□□ -0.47
NEDD9-203ENST00000397378 JAG2Q9Y219 1238 aa12.09□□□□□ -0.47
NEDD9-203ENST00000397378 MAP3K2Q9Y2U5 619 aa12.09□□□□□ -0.47
NEDD9-203ENST00000397378 PRUNE2Q8WUY3 3088 aa12.08□□□□□ -0.48
NEDD9-203ENST00000397378 IGHMBP2P38935 993 aaKnown RBP12.08□□□□□ -0.48
NEDD9-203ENST00000397378 TNNI2P48788 182 aa12.08□□□□□ -0.48
NEDD9-203ENST00000397378 FLT3LGP49771 235 aa12.08□□□□□ -0.48
NEDD9-203ENST00000397378 CALD1Q05682 793 aaKnown RBP12.08□□□□□ -0.48
NEDD9-203ENST00000397378 PPIL2Q13356 520 aa12.08□□□□□ -0.48
NEDD9-203ENST00000397378 SPDYE2Q495Y8 402 aa12.08□□□□□ -0.48
NEDD9-203ENST00000397378 KSR2Q6VAB6 950 aa12.08□□□□□ -0.48
NEDD9-203ENST00000397378 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.08□□□□□ -0.48
NEDD9-203ENST00000397378 CRISPLD2Q9H0B8 497 aa12.08□□□□□ -0.48
NEDD9-203ENST00000397378 PAK6Q9NQU5 681 aaPredicted RBP12.08□□□□□ -0.48
NEDD9-203ENST00000397378 MUC3AQ02505 3323 aa12.07□□□□□ -0.48
NEDD9-203ENST00000397378 TMEM265A0A087WTH1 108 aa12.07□□□□□ -0.48
NEDD9-203ENST00000397378 PI4KAP2A4QPH2 592 aa12.07□□□□□ -0.48
NEDD9-203ENST00000397378 H7C1W4 665 aa12.07□□□□□ -0.48
NEDD9-203ENST00000397378 TNFRSF10AO00220 468 aa12.07□□□□□ -0.48
NEDD9-203ENST00000397378 NEXNQ0ZGT2 675 aa12.07□□□□□ -0.48
NEDD9-203ENST00000397378 DDX60LQ5H9U9 1706 aaKnown RBP12.07□□□□□ -0.48
NEDD9-203ENST00000397378 ANKRD23Q86SG2 305 aa12.07□□□□□ -0.48
NEDD9-203ENST00000397378 PI4KAP1Q8N8J0 262 aa12.07□□□□□ -0.48
NEDD9-203ENST00000397378 ANKLE1Q8NAG6 615 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms