RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 ZNF296Q8WUU4 475 aaPredicted RBP16.21■□□□□ 0.19
SEC13-209ENST00000397117 CDC5LQ99459 802 aaKnown RBP16.21■□□□□ 0.19
SEC13-209ENST00000397117 MXD3Q9BW11 206 aa16.21■□□□□ 0.19
SEC13-209ENST00000397117 SASH1O94885 1247 aa16.2■□□□□ 0.18
SEC13-209ENST00000397117 LDHAL6AQ6ZMR3 332 aa16.2■□□□□ 0.18
SEC13-209ENST00000397117 CNNM1Q9NRU3 951 aa16.2■□□□□ 0.18
SEC13-209ENST00000397117 WNT10BO00744 389 aa16.19■□□□□ 0.18
SEC13-209ENST00000397117 IGHMBP2P38935 993 aaKnown RBP16.19■□□□□ 0.18
SEC13-209ENST00000397117 LRRC24Q50LG9 513 aa16.19■□□□□ 0.18
SEC13-209ENST00000397117 NOM1Q5C9Z4 860 aaKnown RBP16.19■□□□□ 0.18
SEC13-209ENST00000397117 STRIP1Q5VSL9 837 aa16.19■□□□□ 0.18
SEC13-209ENST00000397117 IFIT2P09913 472 aaKnown RBP16.19■□□□□ 0.18
SEC13-209ENST00000397117 TFCP2Q12800 502 aa16.19■□□□□ 0.18
SEC13-209ENST00000397117 ATG9AQ7Z3C6 839 aa16.19■□□□□ 0.18
SEC13-209ENST00000397117 PLEKHM2Q8IWE5 1019 aa16.19■□□□□ 0.18
SEC13-209ENST00000397117 OTUD7AQ8TE49 926 aaPredicted RBP16.19■□□□□ 0.18
SEC13-209ENST00000397117 MPHOSPH8Q99549 860 aa16.19■□□□□ 0.18
SEC13-209ENST00000397117 PUS3Q9BZE2 481 aaKnown RBP16.19■□□□□ 0.18
SEC13-209ENST00000397117 COA1Q9GZY4 146 aa16.19■□□□□ 0.18
SEC13-209ENST00000397117 HDAC9Q9UKV0 1011 aa16.19■□□□□ 0.18
SEC13-209ENST00000397117 MYO3BQ8WXR4 1341 aa16.18■□□□□ 0.18
SEC13-209ENST00000397117 GPR25O00155 361 aa16.18■□□□□ 0.18
SEC13-209ENST00000397117 MMP14P50281 582 aa16.18■□□□□ 0.18
SEC13-209ENST00000397117 PRPF38BQ5VTL8 546 aaKnown RBP16.18■□□□□ 0.18
SEC13-209ENST00000397117 AACSQ86V21 672 aa16.18■□□□□ 0.18
SEC13-209ENST00000397117 TXNRD3Q86VQ6 643 aa16.18■□□□□ 0.18
SEC13-209ENST00000397117 OGFOD1Q8N543 542 aa16.18■□□□□ 0.18
SEC13-209ENST00000397117 CEP126Q9P2H0 1117 aa16.18■□□□□ 0.18
SEC13-209ENST00000397117 MX1P20591 662 aa16.17■□□□□ 0.18
SEC13-209ENST00000397117 TTLL12Q14166 644 aaPredicted RBP16.17■□□□□ 0.18
SEC13-209ENST00000397117 GPATCH3Q96I76 525 aa16.17■□□□□ 0.18
SEC13-209ENST00000397117 CFHR5Q9BXR6 569 aa16.17■□□□□ 0.18
SEC13-209ENST00000397117 LEMD3Q9Y2U8 911 aa16.17■□□□□ 0.18
SEC13-209ENST00000397117 NF2P35240 595 aa16.16■□□□□ 0.18
SEC13-209ENST00000397117 PDE1AP54750 535 aa16.16■□□□□ 0.18
SEC13-209ENST00000397117 METTL24Q5JXM2 366 aa16.16■□□□□ 0.18
SEC13-209ENST00000397117 ZBED3Q96IU2 234 aaPredicted RBP16.16■□□□□ 0.18
SEC13-209ENST00000397117 TNNI3KQ59H18 835 aa16.16■□□□□ 0.18
SEC13-209ENST00000397117 LDLRAD1Q5T700 205 aa16.16■□□□□ 0.18
SEC13-209ENST00000397117 R3HDMLQ9H3Y0 253 aa16.16■□□□□ 0.18
SEC13-209ENST00000397117 RIPOR2Q9Y4F9 1068 aa16.16■□□□□ 0.18
SEC13-209ENST00000397117 FPGT-TNNI3KV9GXZ4 949 aa16.16■□□□□ 0.18
SEC13-209ENST00000397117 MROH5Q6ZUA9 1318 aa16.15■□□□□ 0.18
SEC13-209ENST00000397117 TTLL5Q6EMB2 1281 aa16.15■□□□□ 0.18
SEC13-209ENST00000397117 FBXO46Q6PJ61 603 aaPredicted RBP16.15■□□□□ 0.18
SEC13-209ENST00000397117 FBXW7Q969H0 707 aa16.15■□□□□ 0.18
SEC13-209ENST00000397117 EAF2Q96CJ1 260 aaPredicted RBP16.15■□□□□ 0.18
SEC13-209ENST00000397117 OSBPL3Q9H4L5 887 aa16.15■□□□□ 0.18
SEC13-209ENST00000397117 GPR108Q9NPR9 543 aa16.15■□□□□ 0.18
SEC13-209ENST00000397117 AKAP2Q9Y2D5 859 aa16.15■□□□□ 0.18
SEC13-209ENST00000397117 SREBF2Q12772 1141 aa16.14■□□□□ 0.17
SEC13-209ENST00000397117 MKRN3Q13064 507 aaKnown RBP16.14■□□□□ 0.17
SEC13-209ENST00000397117 ARMC9Q7Z3E5 817 aa16.14■□□□□ 0.17
SEC13-209ENST00000397117 CCDC8Q9H0W5 538 aaPredicted RBP16.14■□□□□ 0.17
SEC13-209ENST00000397117 TSHZ2Q9NRE2 1034 aa16.14■□□□□ 0.17
SEC13-209ENST00000397117 STAP2Q9UGK3 403 aa16.14■□□□□ 0.17
SEC13-209ENST00000397117 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.14■□□□□ 0.17
SEC13-209ENST00000397117 ZNF804BA4D1E1 1349 aa16.13■□□□□ 0.17
SEC13-209ENST00000397117 SALL3Q9BXA9 1300 aa16.13■□□□□ 0.17
SEC13-209ENST00000397117 FKTNO75072 461 aa16.13■□□□□ 0.17
SEC13-209ENST00000397117 KLRK1P26718 216 aa16.13■□□□□ 0.17
SEC13-209ENST00000397117 BMP2KLQ5H9B9 411 aa16.13■□□□□ 0.17
SEC13-209ENST00000397117 SPRYD7Q5W111 196 aa16.13■□□□□ 0.17
SEC13-209ENST00000397117 APOBEC3FQ8IUX4 373 aaKnown RBP16.13■□□□□ 0.17
SEC13-209ENST00000397117 NEUROD6Q96NK8 337 aa16.13■□□□□ 0.17
SEC13-209ENST00000397117 AOX1Q06278 1338 aa16.13■□□□□ 0.17
SEC13-209ENST00000397117 TTC41PQ6P2S7 1318 aa16.13■□□□□ 0.17
SEC13-209ENST00000397117 ERC2O15083 957 aa16.12■□□□□ 0.17
SEC13-209ENST00000397117 PRKG1Q13976 671 aa16.12■□□□□ 0.17
SEC13-209ENST00000397117 TTC22Q5TAA0 569 aa16.12■□□□□ 0.17
SEC13-209ENST00000397117 TSHZ3Q63HK5 1081 aa16.12■□□□□ 0.17
SEC13-209ENST00000397117 KIAA0825Q8IV33 1275 aa16.12■□□□□ 0.17
SEC13-209ENST00000397117 ANKRD2Q9GZV1 360 aa16.12■□□□□ 0.17
SEC13-209ENST00000397117 GTF2IP78347 998 aa16.12■□□□□ 0.17
SEC13-209ENST00000397117 ECHDC1Q9NTX5 307 aa16.12■□□□□ 0.17
SEC13-209ENST00000397117 LAMB1P07942 1786 aa16.11■□□□□ 0.17
SEC13-209ENST00000397117 ECM29Q5VYK3 1845 aa16.11■□□□□ 0.17
SEC13-209ENST00000397117 PDE8BO95263 885 aa16.11■□□□□ 0.17
SEC13-209ENST00000397117 ANGEL1Q9UNK9 670 aaKnown RBP16.11■□□□□ 0.17
SEC13-209ENST00000397117 IRS2Q9Y4H2 1338 aa16.1■□□□□ 0.17
SEC13-209ENST00000397117 A0A1B0GUL7 405 aa16.1■□□□□ 0.17
SEC13-209ENST00000397117 GLRX3O76003 335 aaKnown RBP16.1■□□□□ 0.17
SEC13-209ENST00000397117 TIMM10P62072 90 aa16.1■□□□□ 0.17
SEC13-209ENST00000397117 MAP3K11Q16584 847 aa16.1■□□□□ 0.17
SEC13-209ENST00000397117 ATP2B3Q16720 1220 aa16.1■□□□□ 0.17
SEC13-209ENST00000397117 GORABQ5T7V8 394 aa16.1■□□□□ 0.17
SEC13-209ENST00000397117 MTMR14Q8NCE2 650 aa16.1■□□□□ 0.17
SEC13-209ENST00000397117 CD209Q9NNX6 404 aa16.1■□□□□ 0.17
SEC13-209ENST00000397117 TLR7Q9NYK1 1049 aaKnown RBP16.1■□□□□ 0.17
SEC13-209ENST00000397117 FZD1Q9UP38 647 aa16.1■□□□□ 0.17
SEC13-209ENST00000397117 COL1A1P02452 1464 aaPredicted RBP16.09■□□□□ 0.17
SEC13-209ENST00000397117 ALDH1A1P00352 501 aa16.09■□□□□ 0.17
SEC13-209ENST00000397117 GSPT1P15170 499 aaKnown RBP16.09■□□□□ 0.17
SEC13-209ENST00000397117 INHBEP58166 350 aa16.09■□□□□ 0.17
SEC13-209ENST00000397117 CHRNDQ07001 517 aa16.09■□□□□ 0.17
SEC13-209ENST00000397117 PUM3Q15397 648 aaKnown RBP16.09■□□□□ 0.17
SEC13-209ENST00000397117 CERS5Q8N5B7 392 aa16.09■□□□□ 0.17
SEC13-209ENST00000397117 VGLL2Q8N8G2 317 aa16.09■□□□□ 0.17
SEC13-209ENST00000397117 HELBQ8NG08 1087 aaPredicted RBP16.09■□□□□ 0.17
SEC13-209ENST00000397117 DEFB129Q9H1M3 183 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms