RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 ATP1A3P13637 1013 aa27.72■■■□□ 2.03
CSNK1E-203ENST00000396832 PHKG2P15735 406 aa27.72■■■□□ 2.03
CSNK1E-203ENST00000396832 OAS2P29728 719 aaKnown RBP27.72■■■□□ 2.03
CSNK1E-203ENST00000396832 RABL6Q3YEC7 729 aaPredicted RBP27.72■■■□□ 2.03
CSNK1E-203ENST00000396832 ATG9AQ7Z3C6 839 aa27.72■■■□□ 2.03
CSNK1E-203ENST00000396832 OSBP2Q969R2 916 aa27.72■■■□□ 2.03
CSNK1E-203ENST00000396832 AIFM3Q96NN9 605 aa27.72■■■□□ 2.03
CSNK1E-203ENST00000396832 ZBTB3Q9H5J0 574 aa27.72■■■□□ 2.03
CSNK1E-203ENST00000396832 GOLGA8BA8MQT2 603 aa27.71■■■□□ 2.03
CSNK1E-203ENST00000396832 SNRPA1P09661 255 aaKnown RBP27.71■■■□□ 2.03
CSNK1E-203ENST00000396832 DNAJC5Q9H3Z4 198 aa27.71■■■□□ 2.03
CSNK1E-203ENST00000396832 KIF28PB7ZC32 967 aa27.71■■■□□ 2.03
CSNK1E-203ENST00000396832 TBC1D8O95759 1140 aa27.71■■■□□ 2.03
CSNK1E-203ENST00000396832 TPM1P09493 284 aa27.71■■■□□ 2.03
CSNK1E-203ENST00000396832 CCDC158Q5M9N0 1113 aa27.71■■■□□ 2.03
CSNK1E-203ENST00000396832 CABLES1Q8TDN4 633 aa27.71■■■□□ 2.03
CSNK1E-203ENST00000396832 DENND2AQ9ULE3 1009 aa27.71■■■□□ 2.03
CSNK1E-203ENST00000396832 KLF18A0A0U1RQI7 1052 aa27.71■■■□□ 2.03
CSNK1E-203ENST00000396832 CHRNA2Q15822 529 aa27.71■■■□□ 2.03
CSNK1E-203ENST00000396832 LRRFIP1Q32MZ4 808 aaKnown RBP27.71■■■□□ 2.03
CSNK1E-203ENST00000396832 ADALQ6DHV7 355 aa27.71■■■□□ 2.03
CSNK1E-203ENST00000396832 PI16Q6UXB8 463 aa27.71■■■□□ 2.03
CSNK1E-203ENST00000396832 TTLL7Q6ZT98 887 aa27.71■■■□□ 2.03
CSNK1E-203ENST00000396832 LINC00301Q8NCQ3 95 aa27.71■■■□□ 2.03
CSNK1E-203ENST00000396832 EVCP57679 992 aa27.7■■■□□ 2.02
CSNK1E-203ENST00000396832 GPS2Q13227 327 aa27.7■■■□□ 2.02
CSNK1E-203ENST00000396832 ZMYM1Q5SVZ6 1142 aa27.7■■■□□ 2.02
CSNK1E-203ENST00000396832 SIPA1L3O60292 1781 aaPredicted RBP27.7■■■□□ 2.02
CSNK1E-203ENST00000396832 SMC1AQ14683 1233 aaKnown RBP27.7■■■□□ 2.02
CSNK1E-203ENST00000396832 A0A1B0GUL7 405 aa27.69■■■□□ 2.02
CSNK1E-203ENST00000396832 FAM177A1Q8N128 213 aaPredicted RBP27.69■■■□□ 2.02
CSNK1E-203ENST00000396832 DSCC1Q9BVC3 393 aa27.69■■■□□ 2.02
CSNK1E-203ENST00000396832 TMX1Q9H3N1 280 aa27.69■■■□□ 2.02
CSNK1E-203ENST00000396832 PARP3Q9Y6F1 533 aa27.69■■■□□ 2.02
CSNK1E-203ENST00000396832 NCAPHQ15003 741 aa27.69■■■□□ 2.02
CSNK1E-203ENST00000396832 CCDC34Q96HJ3 373 aa27.69■■■□□ 2.02
CSNK1E-203ENST00000396832 SLC3A2P08195 630 aaKnown RBP27.68■■■□□ 2.02
CSNK1E-203ENST00000396832 FANCCQ00597 558 aa27.68■■■□□ 2.02
CSNK1E-203ENST00000396832 CC2D1AQ6P1N0 951 aaPredicted RBP27.68■■■□□ 2.02
CSNK1E-203ENST00000396832 SPTLC2O15270 562 aa27.68■■■□□ 2.02
CSNK1E-203ENST00000396832 FOXO4P98177 505 aa27.68■■■□□ 2.02
CSNK1E-203ENST00000396832 UTP14AQ9BVJ6 771 aaKnown RBP27.68■■■□□ 2.02
CSNK1E-203ENST00000396832 HELLSQ9NRZ9 838 aa27.68■■■□□ 2.02
CSNK1E-203ENST00000396832 MROH7-TTC4A0A0A0MT08 1334 aa27.68■■■□□ 2.02
CSNK1E-203ENST00000396832 PALLDQ8WX93 1383 aa27.68■■■□□ 2.02
CSNK1E-203ENST00000396832 TATP17735 454 aaPredicted RBP27.67■■■□□ 2.02
CSNK1E-203ENST00000396832 ZSCAN26Q16670 478 aa27.67■■■□□ 2.02
CSNK1E-203ENST00000396832 STK11IPQ8N1F8 1099 aa27.67■■■□□ 2.02
CSNK1E-203ENST00000396832 CPLX1O14810 134 aa27.67■■■□□ 2.02
CSNK1E-203ENST00000396832 ZNF202O95125 648 aa27.67■■■□□ 2.02
CSNK1E-203ENST00000396832 ADORA1P30542 326 aa27.67■■■□□ 2.02
CSNK1E-203ENST00000396832 CASP7P55210 303 aa27.67■■■□□ 2.02
CSNK1E-203ENST00000396832 REXO1L1PQ8IX06 675 aa27.67■■■□□ 2.02
CSNK1E-203ENST00000396832 RNF113AO15541 343 aaKnown RBP27.66■■■□□ 2.02
CSNK1E-203ENST00000396832 KRT28Q7Z3Y7 464 aa27.66■■■□□ 2.02
CSNK1E-203ENST00000396832 RTEL1Q9NZ71 1219 aa27.66■■■□□ 2.02
CSNK1E-203ENST00000396832 NEDD4P46934 1319 aa27.66■■■□□ 2.02
CSNK1E-203ENST00000396832 A0A1W2PQ27 194 aa27.66■■■□□ 2.02
CSNK1E-203ENST00000396832 A0A1W2PQ64 194 aa27.66■■■□□ 2.02
CSNK1E-203ENST00000396832 A0A1W2PQD8 194 aa27.66■■■□□ 2.02
CSNK1E-203ENST00000396832 PRC1O43663 620 aa27.66■■■□□ 2.02
CSNK1E-203ENST00000396832 NLRP12P59046 1061 aa27.66■■■□□ 2.02
CSNK1E-203ENST00000396832 CYP27B1O15528 508 aa27.65■■■□□ 2.02
CSNK1E-203ENST00000396832 AGXT2Q9BYV1 514 aa27.65■■■□□ 2.02
CSNK1E-203ENST00000396832 PFKFB1P16118 471 aa27.65■■■□□ 2.02
CSNK1E-203ENST00000396832 MYSM1Q5VVJ2 828 aa27.65■■■□□ 2.02
CSNK1E-203ENST00000396832 MEGF6O75095 1541 aa27.64■■■□□ 2.02
CSNK1E-203ENST00000396832 OVOS2A0A0G2JMS6 1433 aa27.64■■■□□ 2.02
CSNK1E-203ENST00000396832 TNNT3P45378 269 aaPredicted RBP27.64■■■□□ 2.02
CSNK1E-203ENST00000396832 SYNE3Q6ZMZ3 975 aa27.64■■■□□ 2.02
CSNK1E-203ENST00000396832 CCDC191Q8NCU4 936 aa27.64■■■□□ 2.02
CSNK1E-203ENST00000396832 NKX2-3Q8TAU0 364 aa27.64■■■□□ 2.02
CSNK1E-203ENST00000396832 DPF2Q92785 391 aa27.64■■■□□ 2.02
CSNK1E-203ENST00000396832 ZNF274Q96GC6 653 aaPredicted RBP27.64■■■□□ 2.02
CSNK1E-203ENST00000396832 RASSF4Q9H2L5 321 aa27.64■■■□□ 2.02
CSNK1E-203ENST00000396832 SCARF1Q14162 830 aa27.64■■■□□ 2.01
CSNK1E-203ENST00000396832 GYS2P54840 703 aa27.63■■■□□ 2.01
CSNK1E-203ENST00000396832 GNL2Q13823 731 aaKnown RBP27.63■■■□□ 2.01
CSNK1E-203ENST00000396832 GPR161Q8N6U8 529 aaKnown RBP27.63■■■□□ 2.01
CSNK1E-203ENST00000396832 ZBTB9Q96C00 473 aa27.63■■■□□ 2.01
CSNK1E-203ENST00000396832 NBPF26B4DH59 902 aa27.63■■■□□ 2.01
CSNK1E-203ENST00000396832 FOXP2O15409 715 aa27.63■■■□□ 2.01
CSNK1E-203ENST00000396832 WDHD1O75717 1129 aaPredicted RBP27.63■■■□□ 2.01
CSNK1E-203ENST00000396832 A1BGP04217 495 aa27.63■■■□□ 2.01
CSNK1E-203ENST00000396832 CABP4P57796 275 aa27.63■■■□□ 2.01
CSNK1E-203ENST00000396832 NBPF14Q5TI25 921 aa27.63■■■□□ 2.01
CSNK1E-203ENST00000396832 NBPF10Q6P3W6 841 aaKnown RBP27.63■■■□□ 2.01
CSNK1E-203ENST00000396832 NBPF15Q8N660 670 aa27.63■■■□□ 2.01
CSNK1E-203ENST00000396832 ARFGAP3Q9NP61 516 aa27.62■■■□□ 2.01
CSNK1E-203ENST00000396832 RFX7Q2KHR2 1363 aa27.62■■■□□ 2.01
CSNK1E-203ENST00000396832 UBASH3AP57075 661 aa27.62■■■□□ 2.01
CSNK1E-203ENST00000396832 IFNL2Q8IZJ0 200 aa27.62■■■□□ 2.01
CSNK1E-203ENST00000396832 LCMT1Q9UIC8 334 aa27.62■■■□□ 2.01
CSNK1E-203ENST00000396832 UBE2Q2LH0YL09 131 aa27.61■■■□□ 2.01
CSNK1E-203ENST00000396832 FGAP02671 866 aa27.61■■■□□ 2.01
CSNK1E-203ENST00000396832 PUS7LQ9H0K6 701 aaKnown RBP27.61■■■□□ 2.01
CSNK1E-203ENST00000396832 RSPH14Q9UHP6 348 aa27.61■■■□□ 2.01
CSNK1E-203ENST00000396832 HPS5Q9UPZ3 1129 aa27.61■■■□□ 2.01
CSNK1E-203ENST00000396832 PNOCQ13519 176 aa27.61■■■□□ 2.01
CSNK1E-203ENST00000396832 C10orf67Q8IYJ2 551 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms