RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 AFDNP55196 1824 aaKnown RBP15.49■□□□□ 0.07
TRIM40-207ENST00000396581 YEATS4O95619 227 aa15.49■□□□□ 0.07
TRIM40-207ENST00000396581 HSPD1P10809 573 aaKnown RBP15.49■□□□□ 0.07
TRIM40-207ENST00000396581 FAM98CQ17RN3 349 aaKnown RBP15.49■□□□□ 0.07
TRIM40-207ENST00000396581 FBXO38Q6PIJ6 1188 aa15.49■□□□□ 0.07
TRIM40-207ENST00000396581 TTLL7Q6ZT98 887 aa15.49■□□□□ 0.07
TRIM40-207ENST00000396581 POLR3EQ9NVU0 708 aa15.49■□□□□ 0.07
TRIM40-207ENST00000396581 A0A087WWV3 80 aa15.48■□□□□ 0.07
TRIM40-207ENST00000396581 HSPA1LP34931 641 aa15.48■□□□□ 0.07
TRIM40-207ENST00000396581 CCT2P78371 535 aaKnown RBP15.48■□□□□ 0.07
TRIM40-207ENST00000396581 TERF2Q15554 542 aa15.48■□□□□ 0.07
TRIM40-207ENST00000396581 UBE3BQ7Z3V4 1068 aa15.48■□□□□ 0.07
TRIM40-207ENST00000396581 PAG1Q9NWQ8 432 aa15.48■□□□□ 0.07
TRIM40-207ENST00000396581 ARMCX5Q6P1M9 558 aa15.48■□□□□ 0.07
TRIM40-207ENST00000396581 KCNG4Q8TDN1 519 aa15.48■□□□□ 0.07
TRIM40-207ENST00000396581 NCOA5Q9HCD5 579 aaKnown RBP15.48■□□□□ 0.07
TRIM40-207ENST00000396581 TRMT1Q9NXH9 659 aaKnown RBP15.48■□□□□ 0.07
TRIM40-207ENST00000396581 USP21Q9UK80 565 aa15.48■□□□□ 0.07
TRIM40-207ENST00000396581 CYP19A1P11511 503 aaPredicted RBP15.47■□□□□ 0.07
TRIM40-207ENST00000396581 H2AFXP16104 143 aaPredicted RBP15.47■□□□□ 0.07
TRIM40-207ENST00000396581 NDUFA8P51970 172 aa15.47■□□□□ 0.07
TRIM40-207ENST00000396581 ELF2Q15723 593 aa15.47■□□□□ 0.07
TRIM40-207ENST00000396581 ATG9AQ7Z3C6 839 aa15.47■□□□□ 0.07
TRIM40-207ENST00000396581 PPP1R13BQ96KQ4 1090 aa15.47■□□□□ 0.07
TRIM40-207ENST00000396581 MAST3O60307 1309 aa15.47■□□□□ 0.07
TRIM40-207ENST00000396581 NCAPHQ15003 741 aa15.47■□□□□ 0.07
TRIM40-207ENST00000396581 DPCR1Q3MIW9 517 aa15.47■□□□□ 0.07
TRIM40-207ENST00000396581 CREBRFQ8IUR6 639 aa15.47■□□□□ 0.07
TRIM40-207ENST00000396581 DDX60Q8IY21 1712 aaKnown RBP15.46■□□□□ 0.07
TRIM40-207ENST00000396581 A0A087WZG4 1122 aa15.46■□□□□ 0.07
TRIM40-207ENST00000396581 ATP5J2-PTCD1G3V325 749 aa15.46■□□□□ 0.07
TRIM40-207ENST00000396581 NLRP12P59046 1061 aa15.46■□□□□ 0.07
TRIM40-207ENST00000396581 FOXO4P98177 505 aa15.46■□□□□ 0.07
TRIM40-207ENST00000396581 DOT1LQ8TEK3 1739 aa15.46■□□□□ 0.07
TRIM40-207ENST00000396581 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.46■□□□□ 0.07
TRIM40-207ENST00000396581 SDF4Q9BRK5 362 aa15.46■□□□□ 0.07
TRIM40-207ENST00000396581 XPO4Q9C0E2 1151 aaKnown RBP15.46■□□□□ 0.07
TRIM40-207ENST00000396581 A0A0G2JLW4 131 aa15.45■□□□□ 0.06
TRIM40-207ENST00000396581 A0A1B0GVL5 298 aa15.45■□□□□ 0.06
TRIM40-207ENST00000396581 H7C1W4 665 aa15.45■□□□□ 0.06
TRIM40-207ENST00000396581 GOLIM4O00461 696 aa15.45■□□□□ 0.06
TRIM40-207ENST00000396581 IKBKBO14920 756 aa15.45■□□□□ 0.06
TRIM40-207ENST00000396581 IGSF3O75054 1194 aa15.45■□□□□ 0.06
TRIM40-207ENST00000396581 FOSBP53539 338 aa15.45■□□□□ 0.06
TRIM40-207ENST00000396581 BRAPQ7Z569 592 aa15.45■□□□□ 0.06
TRIM40-207ENST00000396581 ERCC4Q92889 916 aaPredicted RBP15.45■□□□□ 0.06
TRIM40-207ENST00000396581 RNF113AO15541 343 aaKnown RBP15.45■□□□□ 0.06
TRIM40-207ENST00000396581 ZNF771Q7L3S4 317 aaPredicted RBP15.45■□□□□ 0.06
TRIM40-207ENST00000396581 FBXO18Q8NFZ0 1043 aa15.45■□□□□ 0.06
TRIM40-207ENST00000396581 ACSBG1Q96GR2 724 aa15.45■□□□□ 0.06
TRIM40-207ENST00000396581 ZNF446Q9NWS9 450 aa15.45■□□□□ 0.06
TRIM40-207ENST00000396581 CLIC4Q9Y696 253 aa15.45■□□□□ 0.06
TRIM40-207ENST00000396581 GUCY1B3Q02153 619 aa15.44■□□□□ 0.06
TRIM40-207ENST00000396581 AXDND1Q5T1B0 1012 aaPredicted RBP15.44■□□□□ 0.06
TRIM40-207ENST00000396581 MYSM1Q5VVJ2 828 aa15.44■□□□□ 0.06
TRIM40-207ENST00000396581 LMBR1LQ6UX01 489 aa15.44■□□□□ 0.06
TRIM40-207ENST00000396581 CCDC191Q8NCU4 936 aa15.44■□□□□ 0.06
TRIM40-207ENST00000396581 ZBTB3Q9H5J0 574 aa15.44■□□□□ 0.06
TRIM40-207ENST00000396581 IFNKQ9P0W0 207 aa15.44■□□□□ 0.06
TRIM40-207ENST00000396581 SPTLC2O15270 562 aa15.44■□□□□ 0.06
TRIM40-207ENST00000396581 SFPQP23246 707 aaKnown RBP eCLIP15.44■□□□□ 0.06
TRIM40-207ENST00000396581 IL15P40933 162 aaPredicted RBP15.44■□□□□ 0.06
TRIM40-207ENST00000396581 TRIM28Q13263 835 aaKnown RBP15.44■□□□□ 0.06
TRIM40-207ENST00000396581 STK38Q15208 465 aa15.44■□□□□ 0.06
TRIM40-207ENST00000396581 TIGD1Q96MW7 591 aa15.44■□□□□ 0.06
TRIM40-207ENST00000396581 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.44■□□□□ 0.06
TRIM40-207ENST00000396581 V9GYY5 206 aaPredicted RBP15.44■□□□□ 0.06
TRIM40-207ENST00000396581 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.43■□□□□ 0.06
TRIM40-207ENST00000396581 ZNF202O95125 648 aa15.43■□□□□ 0.06
TRIM40-207ENST00000396581 SLC3A2P08195 630 aaKnown RBP15.43■□□□□ 0.06
TRIM40-207ENST00000396581 CMA1P23946 247 aa15.43■□□□□ 0.06
TRIM40-207ENST00000396581 HSD3B7Q9H2F3 369 aa15.43■□□□□ 0.06
TRIM40-207ENST00000396581 CWC25Q9NXE8 425 aaPredicted RBP15.43■□□□□ 0.06
TRIM40-207ENST00000396581 NUP188Q5SRE5 1749 aa15.43■□□□□ 0.06
TRIM40-207ENST00000396581 FOXP2O15409 715 aa15.42■□□□□ 0.06
TRIM40-207ENST00000396581 CCP110O43303 1012 aa15.42■□□□□ 0.06
TRIM40-207ENST00000396581 DHX16O60231 1041 aaKnown RBP15.42■□□□□ 0.06
TRIM40-207ENST00000396581 TPM4P67936 248 aa15.42■□□□□ 0.06
TRIM40-207ENST00000396581 TCIRG1Q13488 830 aa15.42■□□□□ 0.06
TRIM40-207ENST00000396581 TMC6Q7Z403 805 aa15.42■□□□□ 0.06
TRIM40-207ENST00000396581 C8orf76Q96K31 380 aa15.42■□□□□ 0.06
TRIM40-207ENST00000396581 ISCA1Q9BUE6 129 aa15.42■□□□□ 0.06
TRIM40-207ENST00000396581 TMX1Q9H3N1 280 aa15.42■□□□□ 0.06
TRIM40-207ENST00000396581 TUBE1Q9UJT0 475 aa15.42■□□□□ 0.06
TRIM40-207ENST00000396581 HPS5Q9UPZ3 1129 aa15.42■□□□□ 0.06
TRIM40-207ENST00000396581 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.42■□□□□ 0.06
TRIM40-207ENST00000396581 PHLPP2Q6ZVD8 1323 aa15.42■□□□□ 0.06
TRIM40-207ENST00000396581 WDR19Q8NEZ3 1342 aa15.42■□□□□ 0.06
TRIM40-207ENST00000396581 LOC102724428A0A0B4J2F2 783 aa15.42■□□□□ 0.06
TRIM40-207ENST00000396581 M0R2C6 588 aa15.42■□□□□ 0.06
TRIM40-207ENST00000396581 NRDCO43847 1150 aa15.42■□□□□ 0.06
TRIM40-207ENST00000396581 CIAO1O76071 339 aa15.42■□□□□ 0.06
TRIM40-207ENST00000396581 SMC2O95347 1197 aa15.42■□□□□ 0.06
TRIM40-207ENST00000396581 SIK1P57059 783 aa15.42■□□□□ 0.06
TRIM40-207ENST00000396581 BMS1Q14692 1282 aaKnown RBP15.42■□□□□ 0.06
TRIM40-207ENST00000396581 FAM237AA0A1B0GTK4 181 aa15.41■□□□□ 0.06
TRIM40-207ENST00000396581 KCNQ2O43526 872 aa15.41■□□□□ 0.06
TRIM40-207ENST00000396581 IL6STP40189 918 aaPredicted RBP15.41■□□□□ 0.06
TRIM40-207ENST00000396581 MEX3CQ5U5Q3 659 aaKnown RBP15.41■□□□□ 0.06
TRIM40-207ENST00000396581 SYT10Q6XYQ8 523 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms