RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 CSADQ9Y600 493 aa22.09■■□□□ 1.13
EXOSC3-202ENST00000396521 CRKP46108 304 aa22.08■■□□□ 1.13
EXOSC3-202ENST00000396521 GYG1P46976 350 aa22.08■■□□□ 1.13
EXOSC3-202ENST00000396521 CAVIN4Q5BKX8 364 aa22.08■■□□□ 1.13
EXOSC3-202ENST00000396521 TEPSINQ96N21 525 aa22.08■■□□□ 1.13
EXOSC3-202ENST00000396521 TMEM106CQ9BVX2 250 aa22.08■■□□□ 1.13
EXOSC3-202ENST00000396521 ELP3Q9H9T3 547 aa22.08■■□□□ 1.13
EXOSC3-202ENST00000396521 ZCCHC17Q9NP64 241 aaKnown RBP22.08■■□□□ 1.13
EXOSC3-202ENST00000396521 RIPOR2Q9Y4F9 1068 aa22.08■■□□□ 1.13
EXOSC3-202ENST00000396521 HTTP42858 3142 aa22.07■■□□□ 1.12
EXOSC3-202ENST00000396521 FKBP1CQ5VVH2 108 aa22.07■■□□□ 1.12
EXOSC3-202ENST00000396521 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.07■■□□□ 1.12
EXOSC3-202ENST00000396521 FBXO33Q7Z6M2 555 aa22.07■■□□□ 1.12
EXOSC3-202ENST00000396521 SUGT1Q9Y2Z0 365 aa22.07■■□□□ 1.12
EXOSC3-202ENST00000396521 ECM29Q5VYK3 1845 aa22.07■■□□□ 1.12
EXOSC3-202ENST00000396521 SLC4A10Q6U841 1118 aa22.06■■□□□ 1.12
EXOSC3-202ENST00000396521 UTYO14607 1347 aa22.06■■□□□ 1.12
EXOSC3-202ENST00000396521 AOX1Q06278 1338 aa22.06■■□□□ 1.12
EXOSC3-202ENST00000396521 LAMB1P07942 1786 aa22.05■■□□□ 1.12
EXOSC3-202ENST00000396521 CCL15-CCL14A0A0B4J2E2 113 aa22.05■■□□□ 1.12
EXOSC3-202ENST00000396521 POTEFA5A3E0 1075 aa22.05■■□□□ 1.12
EXOSC3-202ENST00000396521 FRAT2O75474 233 aaPredicted RBP22.05■■□□□ 1.12
EXOSC3-202ENST00000396521 VGLL4Q14135 290 aa22.05■■□□□ 1.12
EXOSC3-202ENST00000396521 TAF1CQ15572 869 aaPredicted RBP22.05■■□□□ 1.12
EXOSC3-202ENST00000396521 CCL15Q16663 113 aa22.05■■□□□ 1.12
EXOSC3-202ENST00000396521 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.05■■□□□ 1.12
EXOSC3-202ENST00000396521 TEKT1Q969V4 418 aa22.05■■□□□ 1.12
EXOSC3-202ENST00000396521 TMOD2Q9NZR1 351 aa22.05■■□□□ 1.12
EXOSC3-202ENST00000396521 SALL2Q9Y467 1007 aaPredicted RBP22.05■■□□□ 1.12
EXOSC3-202ENST00000396521 TCP10L2B9ZVM9 353 aa22.04■■□□□ 1.12
EXOSC3-202ENST00000396521 ANP32CO43423 234 aa22.04■■□□□ 1.12
EXOSC3-202ENST00000396521 GNRH1P01148 92 aa22.04■■□□□ 1.12
EXOSC3-202ENST00000396521 RABL6Q3YEC7 729 aaPredicted RBP22.04■■□□□ 1.12
EXOSC3-202ENST00000396521 FAM83AQ86UY5 434 aa22.04■■□□□ 1.12
EXOSC3-202ENST00000396521 BRI3BPQ8WY22 251 aa22.04■■□□□ 1.12
EXOSC3-202ENST00000396521 MAST3O60307 1309 aa22.04■■□□□ 1.12
EXOSC3-202ENST00000396521 KIAA0100Q14667 2235 aaKnown RBP22.03■■□□□ 1.12
EXOSC3-202ENST00000396521 SPDYE5A6NIY4 337 aa22.03■■□□□ 1.12
EXOSC3-202ENST00000396521 CETPP11597 493 aa22.03■■□□□ 1.12
EXOSC3-202ENST00000396521 ERO1BQ86YB8 467 aa22.03■■□□□ 1.12
EXOSC3-202ENST00000396521 TMEM39BQ9GZU3 492 aa22.03■■□□□ 1.12
EXOSC3-202ENST00000396521 KIF16BQ96L93 1317 aa22.03■■□□□ 1.12
EXOSC3-202ENST00000396521 PDE8BO95263 885 aa22.02■■□□□ 1.12
EXOSC3-202ENST00000396521 KIF22Q14807 665 aa22.02■■□□□ 1.12
EXOSC3-202ENST00000396521 SLC9C1Q4G0N8 1177 aa22.02■■□□□ 1.12
EXOSC3-202ENST00000396521 KAZALD1Q96I82 304 aa22.02■■□□□ 1.12
EXOSC3-202ENST00000396521 SUCLG2Q96I99 432 aa22.02■■□□□ 1.12
EXOSC3-202ENST00000396521 ZNF333Q96JL9 665 aa22.02■■□□□ 1.12
EXOSC3-202ENST00000396521 ZDHHC15Q96MV8 337 aa22.02■■□□□ 1.12
EXOSC3-202ENST00000396521 PUS3Q9BZE2 481 aaKnown RBP22.02■■□□□ 1.12
EXOSC3-202ENST00000396521 NBPF7P0C2Y1 421 aaPredicted RBP22.01■■□□□ 1.11
EXOSC3-202ENST00000396521 PRMT2P55345 433 aa22.01■■□□□ 1.11
EXOSC3-202ENST00000396521 METTL24Q5JXM2 366 aa22.01■■□□□ 1.11
EXOSC3-202ENST00000396521 DCAF15Q66K64 600 aa22.01■■□□□ 1.11
EXOSC3-202ENST00000396521 MKI67P46013 3256 aaKnown RBP22■■□□□ 1.11
EXOSC3-202ENST00000396521 TLR2O60603 784 aa22■■□□□ 1.11
EXOSC3-202ENST00000396521 SNAPC2Q13487 334 aa22■■□□□ 1.11
EXOSC3-202ENST00000396521 HABP4Q5JVS0 413 aaKnown RBP22■■□□□ 1.11
EXOSC3-202ENST00000396521 OTUD5Q96G74 571 aa22■■□□□ 1.11
EXOSC3-202ENST00000396521 SPINK5Q9NQ38 1064 aaPredicted RBP22■■□□□ 1.11
EXOSC3-202ENST00000396521 HHIPL2Q6UWX4 724 aa21.99■■□□□ 1.11
EXOSC3-202ENST00000396521 BICC1Q9H694 974 aaKnown RBP21.99■■□□□ 1.11
EXOSC3-202ENST00000396521 CENPFP49454 3210 aa21.98■■□□□ 1.11
EXOSC3-202ENST00000396521 A0A1B0GUL6 1792 aa21.98■■□□□ 1.11
EXOSC3-202ENST00000396521 IFIT1P09914 478 aaKnown RBP21.98■■□□□ 1.11
EXOSC3-202ENST00000396521 EN2P19622 333 aaPredicted RBP21.98■■□□□ 1.11
EXOSC3-202ENST00000396521 CHAF1AQ13111 956 aaPredicted RBP21.98■■□□□ 1.11
EXOSC3-202ENST00000396521 FAM43AQ8N2R8 423 aa21.98■■□□□ 1.11
EXOSC3-202ENST00000396521 WRNIP1Q96S55 665 aa21.98■■□□□ 1.11
EXOSC3-202ENST00000396521 PTPRCP08575 1304 aa21.98■■□□□ 1.11
EXOSC3-202ENST00000396521 PPIL2Q13356 520 aa21.97■■□□□ 1.11
EXOSC3-202ENST00000396521 PUM3Q15397 648 aaKnown RBP21.97■■□□□ 1.11
EXOSC3-202ENST00000396521 CDAN1Q8IWY9 1227 aa21.97■■□□□ 1.11
EXOSC3-202ENST00000396521 VGLL2Q8N8G2 317 aa21.97■■□□□ 1.11
EXOSC3-202ENST00000396521 CNKSR2Q8WXI2 1034 aa21.97■■□□□ 1.11
EXOSC3-202ENST00000396521 PPATQ06203 517 aa21.96■■□□□ 1.11
EXOSC3-202ENST00000396521 SLC4A8Q2Y0W8 1093 aa21.96■■□□□ 1.11
EXOSC3-202ENST00000396521 LRRC24Q50LG9 513 aa21.96■■□□□ 1.11
EXOSC3-202ENST00000396521 APOBEC3HQ6NTF7 200 aaKnown RBP21.96■■□□□ 1.11
EXOSC3-202ENST00000396521 WDR66Q8TBY9 1149 aa21.96■■□□□ 1.11
EXOSC3-202ENST00000396521 IQSEC3Q9UPP2 1182 aaPredicted RBP21.96■■□□□ 1.11
EXOSC3-202ENST00000396521 PTCH2Q9Y6C5 1203 aa21.96■■□□□ 1.11
EXOSC3-202ENST00000396521 SNCAIPQ9Y6H5 919 aa21.96■■□□□ 1.11
EXOSC3-202ENST00000396521 RPAP1Q9BWH6 1393 aaPredicted RBP21.96■■□□□ 1.11
EXOSC3-202ENST00000396521 LACTBP83111 547 aaPredicted RBP21.95■■□□□ 1.1
EXOSC3-202ENST00000396521 ZNF341Q9BYN7 854 aa21.95■■□□□ 1.1
EXOSC3-202ENST00000396521 IRF6O14896 467 aa21.94■■□□□ 1.1
EXOSC3-202ENST00000396521 BCAMP50895 628 aa21.94■■□□□ 1.1
EXOSC3-202ENST00000396521 GRIK5Q16478 980 aa21.94■■□□□ 1.1
EXOSC3-202ENST00000396521 ANKRD44Q8N8A2 993 aa21.94■■□□□ 1.1
EXOSC3-202ENST00000396521 RBBP6Q7Z6E9 1792 aaKnown RBP21.94■■□□□ 1.1
EXOSC3-202ENST00000396521 BTBD19C9JJ37 291 aa21.93■■□□□ 1.1
EXOSC3-202ENST00000396521 HOXD10P28358 340 aa21.93■■□□□ 1.1
EXOSC3-202ENST00000396521 CAP1Q01518 475 aa21.93■■□□□ 1.1
EXOSC3-202ENST00000396521 LPIN2Q92539 896 aa21.93■■□□□ 1.1
EXOSC3-202ENST00000396521 FGFR2P21802 821 aa21.92■■□□□ 1.1
EXOSC3-202ENST00000396521 CACNB3P54284 484 aa21.92■■□□□ 1.1
EXOSC3-202ENST00000396521 FAM151AQ8WW52 585 aa21.92■■□□□ 1.1
EXOSC3-202ENST00000396521 ZKSCAN4Q969J2 545 aaPredicted RBP21.92■■□□□ 1.1
EXOSC3-202ENST00000396521 FBXO3Q9UK99 471 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms