RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 SUGT1Q9Y2Z0 365 aa18.47■□□□□ 0.55
VAMP1-202ENST00000396308 GNAT2P19087 354 aa18.46■□□□□ 0.55
VAMP1-202ENST00000396308 CERS3Q8IU89 383 aa18.46■□□□□ 0.55
VAMP1-202ENST00000396308 NIM1KQ8IY84 436 aa18.46■□□□□ 0.55
VAMP1-202ENST00000396308 LSG1Q9H089 658 aaKnown RBP18.46■□□□□ 0.55
VAMP1-202ENST00000396308 JAG2Q9Y219 1238 aa18.46■□□□□ 0.55
VAMP1-202ENST00000396308 U3KPZ7 1027 aaPredicted RBP18.46■□□□□ 0.55
VAMP1-202ENST00000396308 M0R2C6 588 aa18.45■□□□□ 0.54
VAMP1-202ENST00000396308 GPAA1O43292 621 aa18.45■□□□□ 0.54
VAMP1-202ENST00000396308 IARSP41252 1262 aaKnown RBP18.45■□□□□ 0.54
VAMP1-202ENST00000396308 MECOMQ03112 1051 aa18.45■□□□□ 0.54
VAMP1-202ENST00000396308 TTLL5Q6EMB2 1281 aa18.45■□□□□ 0.54
VAMP1-202ENST00000396308 ZNF589Q86UQ0 364 aaPredicted RBP18.45■□□□□ 0.54
VAMP1-202ENST00000396308 OSBP2Q969R2 916 aa18.45■□□□□ 0.54
VAMP1-202ENST00000396308 DDRGK1Q96HY6 314 aa18.45■□□□□ 0.54
VAMP1-202ENST00000396308 SEC62Q99442 399 aaKnown RBP18.45■□□□□ 0.54
VAMP1-202ENST00000396308 DSCC1Q9BVC3 393 aa18.45■□□□□ 0.54
VAMP1-202ENST00000396308 LTBP3Q9NS15 1303 aa18.45■□□□□ 0.54
VAMP1-202ENST00000396308 ZNF646O15015 1829 aaPredicted RBP18.44■□□□□ 0.54
VAMP1-202ENST00000396308 LAMA4Q16363 1823 aa18.44■□□□□ 0.54
VAMP1-202ENST00000396308 MAGEB6P1A0A0J9YX57 407 aa18.44■□□□□ 0.54
VAMP1-202ENST00000396308 TCRBV5S4A2TA0A5A2 114 aa18.44■□□□□ 0.54
VAMP1-202ENST00000396308 ZKSCAN1P17029 563 aaPredicted RBP18.44■□□□□ 0.54
VAMP1-202ENST00000396308 PRDX5P30044 214 aa18.44■□□□□ 0.54
VAMP1-202ENST00000396308 FKBP1AP62942 108 aaKnown RBP18.44■□□□□ 0.54
VAMP1-202ENST00000396308 CCDC129Q6ZRS4 1044 aa18.44■□□□□ 0.54
VAMP1-202ENST00000396308 JDP2Q8WYK2 163 aa18.44■□□□□ 0.54
VAMP1-202ENST00000396308 IL25Q9H293 177 aa18.44■□□□□ 0.54
VAMP1-202ENST00000396308 ZNF277Q9NRM2 450 aaPredicted RBP18.44■□□□□ 0.54
VAMP1-202ENST00000396308 SCN9AQ15858 1988 aa18.43■□□□□ 0.54
VAMP1-202ENST00000396308 USP17L3A6NCW0 530 aa18.43■□□□□ 0.54
VAMP1-202ENST00000396308 USP17L4A6NCW7 530 aa18.43■□□□□ 0.54
VAMP1-202ENST00000396308 MBD4O95243 580 aa18.43■□□□□ 0.54
VAMP1-202ENST00000396308 ANAPC15P60006 121 aa18.43■□□□□ 0.54
VAMP1-202ENST00000396308 STRIP1Q5VSL9 837 aa18.43■□□□□ 0.54
VAMP1-202ENST00000396308 USP17L1Q7RTZ2 530 aa18.43■□□□□ 0.54
VAMP1-202ENST00000396308 NSUN4Q96CB9 384 aaKnown RBP18.43■□□□□ 0.54
VAMP1-202ENST00000396308 PUS7LQ9H0K6 701 aaKnown RBP18.43■□□□□ 0.54
VAMP1-202ENST00000396308 CTNNA3Q9UI47 895 aa18.43■□□□□ 0.54
VAMP1-202ENST00000396308 RBM8AQ9Y5S9 174 aaKnown RBP18.43■□□□□ 0.54
VAMP1-202ENST00000396308 MYO3BQ8WXR4 1341 aa18.43■□□□□ 0.54
VAMP1-202ENST00000396308 BAG3O95817 575 aa18.42■□□□□ 0.54
VAMP1-202ENST00000396308 MAP4K1Q92918 833 aa18.42■□□□□ 0.54
VAMP1-202ENST00000396308 NACAP1Q9BZK3 213 aa18.42■□□□□ 0.54
VAMP1-202ENST00000396308 RPAP1Q9BWH6 1393 aaPredicted RBP18.42■□□□□ 0.54
VAMP1-202ENST00000396308 DICER1Q9UPY3 1922 aaKnown RBP18.41■□□□□ 0.54
VAMP1-202ENST00000396308 CHGBP05060 677 aa18.41■□□□□ 0.54
VAMP1-202ENST00000396308 APPP05067 770 aa18.41■□□□□ 0.54
VAMP1-202ENST00000396308 HSPA4P34932 840 aa18.41■□□□□ 0.54
VAMP1-202ENST00000396308 PTH1RQ03431 593 aa18.41■□□□□ 0.54
VAMP1-202ENST00000396308 SLFNL1Q499Z3 407 aa18.41■□□□□ 0.54
VAMP1-202ENST00000396308 NAV1Q8NEY1 1877 aa18.41■□□□□ 0.54
VAMP1-202ENST00000396308 HSPD1P10809 573 aaKnown RBP18.4■□□□□ 0.54
VAMP1-202ENST00000396308 PLCG2P16885 1265 aa18.4■□□□□ 0.54
VAMP1-202ENST00000396308 MIGA1Q8NAN2 632 aa18.4■□□□□ 0.54
VAMP1-202ENST00000396308 IL27Q8NEV9 243 aa18.4■□□□□ 0.54
VAMP1-202ENST00000396308 SYT17Q9BSW7 474 aa18.4■□□□□ 0.54
VAMP1-202ENST00000396308 CRNKL1Q9BZJ0 848 aaKnown RBP18.4■□□□□ 0.54
VAMP1-202ENST00000396308 ZNRF3Q9ULT6 936 aa18.4■□□□□ 0.54
VAMP1-202ENST00000396308 MROH7-TTC4A0A0A0MT08 1334 aa18.4■□□□□ 0.54
VAMP1-202ENST00000396308 LAMB1P07942 1786 aa18.4■□□□□ 0.54
VAMP1-202ENST00000396308 KRT32Q14532 448 aa18.39■□□□□ 0.53
VAMP1-202ENST00000396308 RABEP1Q15276 862 aa18.39■□□□□ 0.53
VAMP1-202ENST00000396308 IMMTQ16891 758 aaKnown RBP18.39■□□□□ 0.53
VAMP1-202ENST00000396308 ARMT1Q9H993 441 aa18.39■□□□□ 0.53
VAMP1-202ENST00000396308 DAXXQ9UER7 740 aaPredicted RBP18.39■□□□□ 0.53
VAMP1-202ENST00000396308 TTF2Q9UNY4 1162 aaKnown RBP18.39■□□□□ 0.53
VAMP1-202ENST00000396308 SLC4A4Q9Y6R1 1079 aa18.39■□□□□ 0.53
VAMP1-202ENST00000396308 ECM29Q5VYK3 1845 aa18.39■□□□□ 0.53
VAMP1-202ENST00000396308 NFKBIEO00221 500 aa18.38■□□□□ 0.53
VAMP1-202ENST00000396308 BECN1Q14457 450 aa18.38■□□□□ 0.53
VAMP1-202ENST00000396308 STRBPQ96SI9 672 aaKnown RBP18.38■□□□□ 0.53
VAMP1-202ENST00000396308 NAPBQ9H115 298 aa18.38■□□□□ 0.53
VAMP1-202ENST00000396308 ZMYM6O95789 1325 aa18.38■□□□□ 0.53
VAMP1-202ENST00000396308 FOCADQ5VW36 1801 aa18.37■□□□□ 0.53
VAMP1-202ENST00000396308 CDK5RAP2Q96SN8 1893 aa18.37■□□□□ 0.53
VAMP1-202ENST00000396308 PATL2C9JE40 543 aaKnown RBP18.37■□□□□ 0.53
VAMP1-202ENST00000396308 TDO2P48775 406 aa18.37■□□□□ 0.53
VAMP1-202ENST00000396308 DACT2Q5SW24 774 aa18.37■□□□□ 0.53
VAMP1-202ENST00000396308 CREB3L3Q68CJ9 461 aa18.37■□□□□ 0.53
VAMP1-202ENST00000396308 ARHGAP27Q6ZUM4 889 aa18.37■□□□□ 0.53
VAMP1-202ENST00000396308 LCORLQ8N3X6 602 aa18.37■□□□□ 0.53
VAMP1-202ENST00000396308 TEKT1Q969V4 418 aa18.37■□□□□ 0.53
VAMP1-202ENST00000396308 AATFQ9NY61 560 aaKnown RBP eCLIP18.37■□□□□ 0.53
VAMP1-202ENST00000396308 TIAM2Q8IVF5 1701 aa18.37■□□□□ 0.53
VAMP1-202ENST00000396308 DCAF8L1A6NGE4 600 aa18.36■□□□□ 0.53
VAMP1-202ENST00000396308 F8W031 263 aaPredicted RBP18.36■□□□□ 0.53
VAMP1-202ENST00000396308 ST18O60284 1047 aa18.36■□□□□ 0.53
VAMP1-202ENST00000396308 PSMA5P28066 241 aa18.36■□□□□ 0.53
VAMP1-202ENST00000396308 RASSF7Q02833 373 aa18.36■□□□□ 0.53
VAMP1-202ENST00000396308 TNIP1Q15025 636 aa18.36■□□□□ 0.53
VAMP1-202ENST00000396308 NECTIN1Q15223 517 aa18.36■□□□□ 0.53
VAMP1-202ENST00000396308 ADGRA1Q86SQ6 560 aa18.36■□□□□ 0.53
VAMP1-202ENST00000396308 AMOTL1Q8IY63 956 aa18.36■□□□□ 0.53
VAMP1-202ENST00000396308 HDAC9Q9UKV0 1011 aa18.36■□□□□ 0.53
VAMP1-202ENST00000396308 SLC27A2O14975 620 aa18.35■□□□□ 0.53
VAMP1-202ENST00000396308 EIF6P56537 245 aaKnown RBP18.35■□□□□ 0.53
VAMP1-202ENST00000396308 HDLBPQ00341 1268 aaKnown RBP18.35■□□□□ 0.53
VAMP1-202ENST00000396308 DIXDC1Q155Q3 683 aa18.35■□□□□ 0.53
VAMP1-202ENST00000396308 VPS53Q5VIR6 699 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms