RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 PLIN1O60240 522 aa17.03■□□□□ 0.32
SCAF11-203ENST00000395453 SASH1O94885 1247 aa17.03■□□□□ 0.32
SCAF11-203ENST00000395453 CT47B1P0C2W7 299 aaPredicted RBP17.03■□□□□ 0.32
SCAF11-203ENST00000395453 ZBTB48P10074 688 aaPredicted RBP17.03■□□□□ 0.32
SCAF11-203ENST00000395453 FKBP1AP62942 108 aaKnown RBP17.03■□□□□ 0.32
SCAF11-203ENST00000395453 ANKRD44Q8N8A2 993 aa17.03■□□□□ 0.32
SCAF11-203ENST00000395453 PTPN22Q9Y2R2 807 aa17.03■□□□□ 0.32
SCAF11-203ENST00000395453 MTMR14Q8NCE2 650 aa17.02■□□□□ 0.32
SCAF11-203ENST00000395453 ARMC5Q96C12 935 aa17.02■□□□□ 0.32
SCAF11-203ENST00000395453 EN2P19622 333 aaPredicted RBP17.01■□□□□ 0.31
SCAF11-203ENST00000395453 OTUD7BQ6GQQ9 843 aa17.01■□□□□ 0.31
SCAF11-203ENST00000395453 TDRD7Q8NHU6 1098 aaKnown RBP17.01■□□□□ 0.31
SCAF11-203ENST00000395453 FAM84BQ96KN1 310 aaPredicted RBP17.01■□□□□ 0.31
SCAF11-203ENST00000395453 MROH5Q6ZUA9 1318 aa17.01■□□□□ 0.31
SCAF11-203ENST00000395453 RBBP6Q7Z6E9 1792 aaKnown RBP17■□□□□ 0.31
SCAF11-203ENST00000395453 IGF2BP3O00425 579 aaKnown RBP eCLIP17■□□□□ 0.31
SCAF11-203ENST00000395453 PPP1R12BO60237 982 aaPredicted RBP17■□□□□ 0.31
SCAF11-203ENST00000395453 MAP3K11Q16584 847 aa17■□□□□ 0.31
SCAF11-203ENST00000395453 EFCC1Q9HA90 598 aa17■□□□□ 0.31
SCAF11-203ENST00000395453 SMC4Q9NTJ3 1288 aa17■□□□□ 0.31
SCAF11-203ENST00000395453 COL1A1P02452 1464 aaPredicted RBP17■□□□□ 0.31
SCAF11-203ENST00000395453 FAM205AQ6ZU69 1335 aa17■□□□□ 0.31
SCAF11-203ENST00000395453 UNCXA6NJT0 531 aa16.99■□□□□ 0.31
SCAF11-203ENST00000395453 CD99L2Q8TCZ2 262 aa16.99■□□□□ 0.31
SCAF11-203ENST00000395453 WNK4Q96J92 1243 aa16.99■□□□□ 0.31
SCAF11-203ENST00000395453 TMEM106CQ9BVX2 250 aa16.99■□□□□ 0.31
SCAF11-203ENST00000395453 DEFB129Q9H1M3 183 aa16.99■□□□□ 0.31
SCAF11-203ENST00000395453 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.99■□□□□ 0.31
SCAF11-203ENST00000395453 HIBADHP31937 336 aaKnown RBP16.98■□□□□ 0.31
SCAF11-203ENST00000395453 DLGAP5Q15398 846 aa16.98■□□□□ 0.31
SCAF11-203ENST00000395453 LRRC24Q50LG9 513 aa16.98■□□□□ 0.31
SCAF11-203ENST00000395453 FBXO33Q7Z6M2 555 aa16.98■□□□□ 0.31
SCAF11-203ENST00000395453 VGLL2Q8N8G2 317 aa16.98■□□□□ 0.31
SCAF11-203ENST00000395453 FZD1Q9UP38 647 aa16.98■□□□□ 0.31
SCAF11-203ENST00000395453 PRR29P0C7W0 189 aa16.97■□□□□ 0.31
SCAF11-203ENST00000395453 GYG1P46976 350 aa16.97■□□□□ 0.31
SCAF11-203ENST00000395453 SP3Q02447 781 aa16.97■□□□□ 0.31
SCAF11-203ENST00000395453 CRHR2Q13324 411 aa16.97■□□□□ 0.31
SCAF11-203ENST00000395453 CLMNQ96JQ2 1002 aa16.97■□□□□ 0.31
SCAF11-203ENST00000395453 COLQQ9Y215 455 aaPredicted RBP16.97■□□□□ 0.31
SCAF11-203ENST00000395453 PPP2R3BQ9Y5P8 575 aa16.97■□□□□ 0.31
SCAF11-203ENST00000395453 PDE8BO95263 885 aa16.96■□□□□ 0.31
SCAF11-203ENST00000395453 RFX5P48382 616 aaPredicted RBP16.96■□□□□ 0.31
SCAF11-203ENST00000395453 SUPT20HL1Q3ZLR7 823 aa16.96■□□□□ 0.31
SCAF11-203ENST00000395453 NOB1Q9ULX3 412 aaKnown RBP16.96■□□□□ 0.31
SCAF11-203ENST00000395453 PCDHAC2Q9Y5I4 1007 aa16.96■□□□□ 0.31
SCAF11-203ENST00000395453 CEP290O15078 2479 aa16.96■□□□□ 0.31
SCAF11-203ENST00000395453 RARSP54136 660 aaKnown RBP16.96■□□□□ 0.3
SCAF11-203ENST00000395453 ARHGEF6Q15052 776 aa16.96■□□□□ 0.3
SCAF11-203ENST00000395453 CFAP100Q494V2 611 aa16.96■□□□□ 0.3
SCAF11-203ENST00000395453 METTL24Q5JXM2 366 aa16.96■□□□□ 0.3
SCAF11-203ENST00000395453 NBPF11Q86T75 865 aa16.96■□□□□ 0.3
SCAF11-203ENST00000395453 KLHDC4Q8TBB5 520 aa16.96■□□□□ 0.3
SCAF11-203ENST00000395453 PRMT6Q96LA8 375 aaPredicted RBP16.96■□□□□ 0.3
SCAF11-203ENST00000395453 JAG2Q9Y219 1238 aa16.96■□□□□ 0.3
SCAF11-203ENST00000395453 ECM29Q5VYK3 1845 aa16.95■□□□□ 0.3
SCAF11-203ENST00000395453 F8W031 263 aaPredicted RBP16.95■□□□□ 0.3
SCAF11-203ENST00000395453 MFSD14BQ5SR56 506 aa16.95■□□□□ 0.3
SCAF11-203ENST00000395453 ZNF333Q96JL9 665 aa16.95■□□□□ 0.3
SCAF11-203ENST00000395453 TRIOBPQ9H2D6 2365 aa16.94■□□□□ 0.3
SCAF11-203ENST00000395453 MYO1BO43795 1136 aa16.94■□□□□ 0.3
SCAF11-203ENST00000395453 FGFR2P21802 821 aa16.94■□□□□ 0.3
SCAF11-203ENST00000395453 IREB2P48200 963 aaKnown RBP16.94■□□□□ 0.3
SCAF11-203ENST00000395453 API5Q9BZZ5 524 aaKnown RBP16.94■□□□□ 0.3
SCAF11-203ENST00000395453 LAMB1P07942 1786 aa16.93■□□□□ 0.3
SCAF11-203ENST00000395453 SSC5DA1L4H1 1573 aa16.93■□□□□ 0.3
SCAF11-203ENST00000395453 AOX1Q06278 1338 aa16.93■□□□□ 0.3
SCAF11-203ENST00000395453 KIF16BQ96L93 1317 aa16.93■□□□□ 0.3
SCAF11-203ENST00000395453 TESPA1A2RU30 521 aaPredicted RBP16.93■□□□□ 0.3
SCAF11-203ENST00000395453 SLC9C1Q4G0N8 1177 aa16.93■□□□□ 0.3
SCAF11-203ENST00000395453 ANKRD13AQ8IZ07 590 aa16.93■□□□□ 0.3
SCAF11-203ENST00000395453 ARHGAP45Q92619 1136 aa16.93■□□□□ 0.3
SCAF11-203ENST00000395453 PTPN18Q99952 460 aa16.93■□□□□ 0.3
SCAF11-203ENST00000395453 SERPINA10Q9UK55 444 aa16.93■□□□□ 0.3
SCAF11-203ENST00000395453 EYA2O00167 538 aa16.92■□□□□ 0.3
SCAF11-203ENST00000395453 GJA5P36382 358 aa16.92■□□□□ 0.3
SCAF11-203ENST00000395453 SLC4A8Q2Y0W8 1093 aa16.92■□□□□ 0.3
SCAF11-203ENST00000395453 CAVIN4Q5BKX8 364 aa16.92■□□□□ 0.3
SCAF11-203ENST00000395453 ATG9AQ7Z3C6 839 aa16.92■□□□□ 0.3
SCAF11-203ENST00000395453 VPS37DQ86XT2 251 aa16.92■□□□□ 0.3
SCAF11-203ENST00000395453 TTF2Q9UNY4 1162 aaKnown RBP16.92■□□□□ 0.3
SCAF11-203ENST00000395453 SZT2Q5T011 3432 aa16.91■□□□□ 0.3
SCAF11-203ENST00000395453 CLRN2A0PK11 232 aa16.91■□□□□ 0.3
SCAF11-203ENST00000395453 USP2O75604 605 aaPredicted RBP16.91■□□□□ 0.3
SCAF11-203ENST00000395453 UBTFL1P0CB47 393 aaPredicted RBP16.91■□□□□ 0.3
SCAF11-203ENST00000395453 BCAMP50895 628 aa16.91■□□□□ 0.3
SCAF11-203ENST00000395453 PUM3Q15397 648 aaKnown RBP16.91■□□□□ 0.3
SCAF11-203ENST00000395453 NBPF12Q5TAG4 269 aaPredicted RBP16.91■□□□□ 0.3
SCAF11-203ENST00000395453 FBXO3Q9UK99 471 aa16.91■□□□□ 0.3
SCAF11-203ENST00000395453 ARAP2Q8WZ64 1704 aa16.91■□□□□ 0.3
SCAF11-203ENST00000395453 RBM5P52756 815 aaKnown RBP eCLIP16.9■□□□□ 0.3
SCAF11-203ENST00000395453 CAP1Q01518 475 aa16.9■□□□□ 0.3
SCAF11-203ENST00000395453 GRIK5Q16478 980 aa16.9■□□□□ 0.3
SCAF11-203ENST00000395453 TBC1D22AQ8WUA7 517 aa16.9■□□□□ 0.3
SCAF11-203ENST00000395453 OTUD5Q96G74 571 aa16.9■□□□□ 0.3
SCAF11-203ENST00000395453 MRIQ9BWK5 157 aa16.9■□□□□ 0.3
SCAF11-203ENST00000395453 VEZTQ9HBM0 779 aa16.9■□□□□ 0.3
SCAF11-203ENST00000395453 IQSEC3Q9UPP2 1182 aaPredicted RBP16.9■□□□□ 0.3
SCAF11-203ENST00000395453 HDAC5Q9UQL6 1122 aa16.9■□□□□ 0.3
SCAF11-203ENST00000395453 H0YGN5 161 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms