RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 ADM5C9JUS6 153 aa16.5■□□□□ 0.23
HLA-DMA-202ENST00000395303 F8W031 263 aaPredicted RBP16.5■□□□□ 0.23
HLA-DMA-202ENST00000395303 FRAT2O75474 233 aaPredicted RBP16.5■□□□□ 0.23
HLA-DMA-202ENST00000395303 SURF6O75683 361 aaKnown RBP16.5■□□□□ 0.23
HLA-DMA-202ENST00000395303 SPDYE6P0CI01 402 aa16.5■□□□□ 0.23
HLA-DMA-202ENST00000395303 MAP2K2P36507 400 aa16.5■□□□□ 0.23
HLA-DMA-202ENST00000395303 CHAF1AQ13111 956 aaPredicted RBP16.5■□□□□ 0.23
HLA-DMA-202ENST00000395303 GRIK5Q16478 980 aa16.5■□□□□ 0.23
HLA-DMA-202ENST00000395303 CFAP100Q494V2 611 aa16.5■□□□□ 0.23
HLA-DMA-202ENST00000395303 CCDC102BQ68D86 513 aa16.5■□□□□ 0.23
HLA-DMA-202ENST00000395303 XAGE2Q96GT9 111 aa16.5■□□□□ 0.23
HLA-DMA-202ENST00000395303 HHIPL1Q96JK4 782 aa16.5■□□□□ 0.23
HLA-DMA-202ENST00000395303 SERPINA10Q9UK55 444 aa16.5■□□□□ 0.23
HLA-DMA-202ENST00000395303 DENND2AQ9ULE3 1009 aa16.5■□□□□ 0.23
HLA-DMA-202ENST00000395303 TTF2Q9UNY4 1162 aaKnown RBP16.5■□□□□ 0.23
HLA-DMA-202ENST00000395303 DLK2Q6UY11 383 aa16.49■□□□□ 0.23
HLA-DMA-202ENST00000395303 SIRT2Q8IXJ6 389 aa16.49■□□□□ 0.23
HLA-DMA-202ENST00000395303 PCDHAC2Q9Y5I4 1007 aa16.49■□□□□ 0.23
HLA-DMA-202ENST00000395303 MAST3O60307 1309 aa16.48■□□□□ 0.23
HLA-DMA-202ENST00000395303 APOBEC3FQ8IUX4 373 aaKnown RBP16.48■□□□□ 0.23
HLA-DMA-202ENST00000395303 PRMT6Q96LA8 375 aaPredicted RBP16.48■□□□□ 0.23
HLA-DMA-202ENST00000395303 TSKSQ9UJT2 592 aa16.48■□□□□ 0.23
HLA-DMA-202ENST00000395303 ARID4AP29374 1257 aaPredicted RBP16.47■□□□□ 0.23
HLA-DMA-202ENST00000395303 CRKP46108 304 aa16.47■□□□□ 0.23
HLA-DMA-202ENST00000395303 RRP1P56182 461 aaKnown RBP16.47■□□□□ 0.23
HLA-DMA-202ENST00000395303 TNNI3KQ59H18 835 aa16.47■□□□□ 0.23
HLA-DMA-202ENST00000395303 CDCA5Q96FF9 252 aa16.47■□□□□ 0.23
HLA-DMA-202ENST00000395303 BEGAINQ9BUH8 593 aa16.47■□□□□ 0.23
HLA-DMA-202ENST00000395303 FPGT-TNNI3KV9GXZ4 949 aa16.47■□□□□ 0.23
HLA-DMA-202ENST00000395303 AOX1Q06278 1338 aa16.46■□□□□ 0.23
HLA-DMA-202ENST00000395303 HMMRO75330 724 aa16.46■□□□□ 0.23
HLA-DMA-202ENST00000395303 OS9Q13438 667 aaPredicted RBP16.46■□□□□ 0.23
HLA-DMA-202ENST00000395303 RASGRF1Q13972 1273 aa16.46■□□□□ 0.23
HLA-DMA-202ENST00000395303 HSP90AB4PQ58FF6 505 aa16.46■□□□□ 0.23
HLA-DMA-202ENST00000395303 HHIPL2Q6UWX4 724 aa16.46■□□□□ 0.23
HLA-DMA-202ENST00000395303 NEUROD6Q96NK8 337 aa16.46■□□□□ 0.23
HLA-DMA-202ENST00000395303 AK9Q5TCS8 1911 aa16.46■□□□□ 0.23
HLA-DMA-202ENST00000395303 DOCK2Q92608 1830 aa16.45■□□□□ 0.22
HLA-DMA-202ENST00000395303 MYO1BO43795 1136 aa16.45■□□□□ 0.22
HLA-DMA-202ENST00000395303 SPDYE2Q495Y8 402 aa16.45■□□□□ 0.22
HLA-DMA-202ENST00000395303 ERC1Q8IUD2 1116 aa16.45■□□□□ 0.22
HLA-DMA-202ENST00000395303 TEKT1Q969V4 418 aa16.45■□□□□ 0.22
HLA-DMA-202ENST00000395303 ZNF408Q9H9D4 720 aa16.45■□□□□ 0.22
HLA-DMA-202ENST00000395303 GBA2Q9HCG7 927 aaPredicted RBP16.45■□□□□ 0.22
HLA-DMA-202ENST00000395303 LAMB1P07942 1786 aa16.45■□□□□ 0.22
HLA-DMA-202ENST00000395303 MAST2Q6P0Q8 1798 aa16.44■□□□□ 0.22
HLA-DMA-202ENST00000395303 PRDX5P30044 214 aa16.44■□□□□ 0.22
HLA-DMA-202ENST00000395303 ZGPATQ8N5A5 531 aaKnown RBP16.44■□□□□ 0.22
HLA-DMA-202ENST00000395303 ZDHHC15Q96MV8 337 aa16.44■□□□□ 0.22
HLA-DMA-202ENST00000395303 ZIC5Q96T25 663 aa16.44■□□□□ 0.22
HLA-DMA-202ENST00000395303 ZNF70Q9UC06 446 aaPredicted RBP16.44■□□□□ 0.22
HLA-DMA-202ENST00000395303 EXOC6BQ9Y2D4 811 aa16.44■□□□□ 0.22
HLA-DMA-202ENST00000395303 PPP2R3BQ9Y5P8 575 aa16.44■□□□□ 0.22
HLA-DMA-202ENST00000395303 CDK5RAP2Q96SN8 1893 aa16.44■□□□□ 0.22
HLA-DMA-202ENST00000395303 CA12O43570 354 aa16.43■□□□□ 0.22
HLA-DMA-202ENST00000395303 UQCRFS1P1P0C7P4 283 aa16.43■□□□□ 0.22
HLA-DMA-202ENST00000395303 RBM5P52756 815 aaKnown RBP eCLIP16.43■□□□□ 0.22
HLA-DMA-202ENST00000395303 FKBP1BP68106 108 aa16.43■□□□□ 0.22
HLA-DMA-202ENST00000395303 C2orf69Q8N8R5 385 aa16.43■□□□□ 0.22
HLA-DMA-202ENST00000395303 EAF2Q96CJ1 260 aaPredicted RBP16.43■□□□□ 0.22
HLA-DMA-202ENST00000395303 ZNF512BQ96KM6 892 aaPredicted RBP16.43■□□□□ 0.22
HLA-DMA-202ENST00000395303 DBNDD2Q9BQY9 259 aa16.43■□□□□ 0.22
HLA-DMA-202ENST00000395303 HMG20BQ9P0W2 317 aa16.43■□□□□ 0.22
HLA-DMA-202ENST00000395303 SCAF8Q9UPN6 1271 aaKnown RBP16.43■□□□□ 0.22
HLA-DMA-202ENST00000395303 OTOFQ9HC10 1997 aa16.42■□□□□ 0.22
HLA-DMA-202ENST00000395303 CASP8AP2Q9UKL3 1982 aa16.42■□□□□ 0.22
HLA-DMA-202ENST00000395303 CLRN2A0PK11 232 aa16.42■□□□□ 0.22
HLA-DMA-202ENST00000395303 LDHBP07195 334 aaKnown RBP16.42■□□□□ 0.22
HLA-DMA-202ENST00000395303 MCAMP43121 646 aa16.42■□□□□ 0.22
HLA-DMA-202ENST00000395303 GORABQ5T7V8 394 aa16.42■□□□□ 0.22
HLA-DMA-202ENST00000395303 APOBEC3HQ6NTF7 200 aaKnown RBP16.42■□□□□ 0.22
HLA-DMA-202ENST00000395303 RHPN1Q8TCX5 695 aa16.42■□□□□ 0.22
HLA-DMA-202ENST00000395303 DEFB129Q9H1M3 183 aa16.42■□□□□ 0.22
HLA-DMA-202ENST00000395303 TDRD3Q9H7E2 651 aaKnown RBP16.42■□□□□ 0.22
HLA-DMA-202ENST00000395303 DBNLQ9UJU6 430 aaKnown RBP16.42■□□□□ 0.22
HLA-DMA-202ENST00000395303 RAB11FIP3O75154 756 aa16.41■□□□□ 0.22
HLA-DMA-202ENST00000395303 HUNKP57058 714 aa16.41■□□□□ 0.22
HLA-DMA-202ENST00000395303 TNFAIP1Q13829 316 aa16.41■□□□□ 0.22
HLA-DMA-202ENST00000395303 CCDC158Q5M9N0 1113 aa16.41■□□□□ 0.22
HLA-DMA-202ENST00000395303 KIF1BPQ96EK5 621 aa16.41■□□□□ 0.22
HLA-DMA-202ENST00000395303 MYH7P12883 1935 aa16.41■□□□□ 0.22
HLA-DMA-202ENST00000395303 FOCADQ5VW36 1801 aa16.4■□□□□ 0.22
HLA-DMA-202ENST00000395303 SSC5DA1L4H1 1573 aa16.4■□□□□ 0.22
HLA-DMA-202ENST00000395303 FAM155AB1AL88 458 aaPredicted RBP16.4■□□□□ 0.22
HLA-DMA-202ENST00000395303 NOGQ13253 232 aa16.4■□□□□ 0.22
HLA-DMA-202ENST00000395303 FKBP1CQ5VVH2 108 aa16.4■□□□□ 0.22
HLA-DMA-202ENST00000395303 PRAMEF18Q5VWM3 479 aa16.4■□□□□ 0.22
HLA-DMA-202ENST00000395303 SPTY2D1Q68D10 685 aaPredicted RBP16.4■□□□□ 0.22
HLA-DMA-202ENST00000395303 SPATA5Q8NB90 893 aa16.4■□□□□ 0.22
HLA-DMA-202ENST00000395303 FAM163AQ96GL9 167 aaPredicted RBP16.4■□□□□ 0.22
HLA-DMA-202ENST00000395303 DAGLAQ9Y4D2 1042 aa16.4■□□□□ 0.22
HLA-DMA-202ENST00000395303 GAKO14976 1311 aa16.4■□□□□ 0.22
HLA-DMA-202ENST00000395303 IGSF3O75054 1194 aa16.39■□□□□ 0.21
HLA-DMA-202ENST00000395303 NF2P35240 595 aa16.39■□□□□ 0.21
HLA-DMA-202ENST00000395303 RASA3Q14644 834 aa16.39■□□□□ 0.21
HLA-DMA-202ENST00000395303 TTC39AQ5SRH9 613 aa16.39■□□□□ 0.21
HLA-DMA-202ENST00000395303 PI16Q6UXB8 463 aa16.39■□□□□ 0.21
HLA-DMA-202ENST00000395303 VEZTQ9HBM0 779 aa16.39■□□□□ 0.21
HLA-DMA-202ENST00000395303 TLR7Q9NYK1 1049 aaKnown RBP16.39■□□□□ 0.21
HLA-DMA-202ENST00000395303 TNRC18O15417 2968 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms