RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 SLC5A1P13866 664 aa14.34□□□□□ -0.11
APOBEC3F-202ENST00000381565 SCARF1Q14162 830 aa14.34□□□□□ -0.11
APOBEC3F-202ENST00000381565 MVPQ14764 893 aaKnown RBP14.34□□□□□ -0.11
APOBEC3F-202ENST00000381565 GRIK5Q16478 980 aa14.34□□□□□ -0.11
APOBEC3F-202ENST00000381565 NBPF9Q3BBW0 867 aa14.34□□□□□ -0.11
APOBEC3F-202ENST00000381565 C20orf194Q5TEA3 1177 aa14.34□□□□□ -0.11
APOBEC3F-202ENST00000381565 RGMBQ6NW40 437 aa14.34□□□□□ -0.11
APOBEC3F-202ENST00000381565 KRT26Q7Z3Y9 468 aa14.34□□□□□ -0.11
APOBEC3F-202ENST00000381565 SSH3Q8TE77 659 aa14.34□□□□□ -0.11
APOBEC3F-202ENST00000381565 YTHDC1Q96MU7 727 aaKnown RBP14.34□□□□□ -0.11
APOBEC3F-202ENST00000381565 PCDHAC2Q9Y5I4 1007 aa14.34□□□□□ -0.11
APOBEC3F-202ENST00000381565 LAMB1P07942 1786 aa14.34□□□□□ -0.11
APOBEC3F-202ENST00000381565 WNT10BO00744 389 aa14.33□□□□□ -0.12
APOBEC3F-202ENST00000381565 ADORA1P30542 326 aa14.33□□□□□ -0.12
APOBEC3F-202ENST00000381565 ATP8B2P98198 1209 aa14.33□□□□□ -0.12
APOBEC3F-202ENST00000381565 TFCP2Q12800 502 aa14.33□□□□□ -0.12
APOBEC3F-202ENST00000381565 MFSD14BQ5SR56 506 aa14.33□□□□□ -0.12
APOBEC3F-202ENST00000381565 ANGEL2Q5VTE6 544 aaKnown RBP14.33□□□□□ -0.12
APOBEC3F-202ENST00000381565 CEP85Q6P2H3 762 aa14.33□□□□□ -0.12
APOBEC3F-202ENST00000381565 GBA2Q9HCG7 927 aaPredicted RBP14.33□□□□□ -0.12
APOBEC3F-202ENST00000381565 CEP126Q9P2H0 1117 aa14.33□□□□□ -0.12
APOBEC3F-202ENST00000381565 COG6Q9Y2V7 657 aa14.33□□□□□ -0.12
APOBEC3F-202ENST00000381565 AOX1Q06278 1338 aa14.33□□□□□ -0.12
APOBEC3F-202ENST00000381565 PITPNM2Q9BZ72 1349 aa14.33□□□□□ -0.12
APOBEC3F-202ENST00000381565 DOCK2Q92608 1830 aa14.32□□□□□ -0.12
APOBEC3F-202ENST00000381565 CDK5RAP2Q96SN8 1893 aa14.32□□□□□ -0.12
APOBEC3F-202ENST00000381565 F8W031 263 aaPredicted RBP14.32□□□□□ -0.12
APOBEC3F-202ENST00000381565 MS4A1P11836 297 aa14.32□□□□□ -0.12
APOBEC3F-202ENST00000381565 KIF23Q02241 960 aaPredicted RBP14.32□□□□□ -0.12
APOBEC3F-202ENST00000381565 CAVIN4Q5BKX8 364 aa14.32□□□□□ -0.12
APOBEC3F-202ENST00000381565 OGFOD1Q8N543 542 aa14.32□□□□□ -0.12
APOBEC3F-202ENST00000381565 SAGE1Q9NXZ1 904 aa14.32□□□□□ -0.12
APOBEC3F-202ENST00000381565 SCAF8Q9UPN6 1271 aaKnown RBP14.32□□□□□ -0.12
APOBEC3F-202ENST00000381565 SLC10A3P09131 477 aa14.31□□□□□ -0.12
APOBEC3F-202ENST00000381565 PHKA1P46020 1223 aa14.31□□□□□ -0.12
APOBEC3F-202ENST00000381565 MMP14P50281 582 aa14.31□□□□□ -0.12
APOBEC3F-202ENST00000381565 CHAF1AQ13111 956 aaPredicted RBP14.31□□□□□ -0.12
APOBEC3F-202ENST00000381565 VPS37DQ86XT2 251 aa14.31□□□□□ -0.12
APOBEC3F-202ENST00000381565 MTMR14Q8NCE2 650 aa14.31□□□□□ -0.12
APOBEC3F-202ENST00000381565 DCPSQ96C86 337 aaKnown RBP14.31□□□□□ -0.12
APOBEC3F-202ENST00000381565 RNF186Q9NXI6 227 aa14.31□□□□□ -0.12
APOBEC3F-202ENST00000381565 A0A1B0GUL7 405 aa14.3□□□□□ -0.12
APOBEC3F-202ENST00000381565 ZBTB40Q9NUA8 1239 aa14.3□□□□□ -0.12
APOBEC3F-202ENST00000381565 HDAC9Q9UKV0 1011 aa14.3□□□□□ -0.12
APOBEC3F-202ENST00000381565 DDX19BQ9UMR2 479 aa14.3□□□□□ -0.12
APOBEC3F-202ENST00000381565 SSC5DA1L4H1 1573 aa14.3□□□□□ -0.12
APOBEC3F-202ENST00000381565 ZNF157P51786 506 aaPredicted RBP14.29□□□□□ -0.12
APOBEC3F-202ENST00000381565 TIMM10P62072 90 aa14.29□□□□□ -0.12
APOBEC3F-202ENST00000381565 PDE3AQ14432 1141 aa14.29□□□□□ -0.12
APOBEC3F-202ENST00000381565 CFAP100Q494V2 611 aa14.29□□□□□ -0.12
APOBEC3F-202ENST00000381565 SULF1Q8IWU6 871 aa14.29□□□□□ -0.12
APOBEC3F-202ENST00000381565 C2orf69Q8N8R5 385 aa14.29□□□□□ -0.12
APOBEC3F-202ENST00000381565 CCDC102AQ96A19 550 aa14.29□□□□□ -0.12
APOBEC3F-202ENST00000381565 CDCA5Q96FF9 252 aa14.29□□□□□ -0.12
APOBEC3F-202ENST00000381565 CSRNP1Q96S65 589 aa14.29□□□□□ -0.12
APOBEC3F-202ENST00000381565 TTF2Q9UNY4 1162 aaKnown RBP14.29□□□□□ -0.12
APOBEC3F-202ENST00000381565 FOCADQ5VW36 1801 aa14.29□□□□□ -0.12
APOBEC3F-202ENST00000381565 TRPA1O75762 1119 aa14.28□□□□□ -0.12
APOBEC3F-202ENST00000381565 CCDC102BQ68D86 513 aa14.28□□□□□ -0.12
APOBEC3F-202ENST00000381565 TBC1D22AQ8WUA7 517 aa14.28□□□□□ -0.12
APOBEC3F-202ENST00000381565 XAGE2Q96GT9 111 aa14.28□□□□□ -0.12
APOBEC3F-202ENST00000381565 NOP58Q9Y2X3 529 aaKnown RBP14.28□□□□□ -0.12
APOBEC3F-202ENST00000381565 FRAT2O75474 233 aaPredicted RBP14.27□□□□□ -0.13
APOBEC3F-202ENST00000381565 SOX10P56693 466 aa14.27□□□□□ -0.13
APOBEC3F-202ENST00000381565 G3BP1Q13283 466 aaKnown RBP eCLIP14.27□□□□□ -0.13
APOBEC3F-202ENST00000381565 RASGRF1Q13972 1273 aa14.27□□□□□ -0.13
APOBEC3F-202ENST00000381565 DLGAP5Q15398 846 aa14.27□□□□□ -0.13
APOBEC3F-202ENST00000381565 RASAL3Q86YV0 1011 aa14.27□□□□□ -0.13
APOBEC3F-202ENST00000381565 SIRT2Q8IXJ6 389 aa14.27□□□□□ -0.13
APOBEC3F-202ENST00000381565 PRMT6Q96LA8 375 aaPredicted RBP14.27□□□□□ -0.13
APOBEC3F-202ENST00000381565 SERPINA10Q9UK55 444 aa14.27□□□□□ -0.13
APOBEC3F-202ENST00000381565 PDE4DIPQ5VU43 2346 aa14.27□□□□□ -0.13
APOBEC3F-202ENST00000381565 AK9Q5TCS8 1911 aa14.27□□□□□ -0.13
APOBEC3F-202ENST00000381565 MYH7P12883 1935 aa14.26□□□□□ -0.13
APOBEC3F-202ENST00000381565 SEMA3EO15041 775 aa14.26□□□□□ -0.13
APOBEC3F-202ENST00000381565 SURF6O75683 361 aaKnown RBP14.26□□□□□ -0.13
APOBEC3F-202ENST00000381565 CRKP46108 304 aa14.26□□□□□ -0.13
APOBEC3F-202ENST00000381565 APOBEC3FQ8IUX4 373 aaKnown RBP14.26□□□□□ -0.13
APOBEC3F-202ENST00000381565 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.26□□□□□ -0.13
APOBEC3F-202ENST00000381565 AKAP2Q9Y2D5 859 aa14.26□□□□□ -0.13
APOBEC3F-202ENST00000381565 PDS5AQ29RF7 1337 aaKnown RBP14.25□□□□□ -0.13
APOBEC3F-202ENST00000381565 SALL1Q9NSC2 1324 aa14.25□□□□□ -0.13
APOBEC3F-202ENST00000381565 CLRN2A0PK11 232 aa14.25□□□□□ -0.13
APOBEC3F-202ENST00000381565 PRDX5P30044 214 aa14.25□□□□□ -0.13
APOBEC3F-202ENST00000381565 RRP1P56182 461 aaKnown RBP14.25□□□□□ -0.13
APOBEC3F-202ENST00000381565 TNNI3KQ59H18 835 aa14.25□□□□□ -0.13
APOBEC3F-202ENST00000381565 PRAMEF18Q5VWM3 479 aa14.25□□□□□ -0.13
APOBEC3F-202ENST00000381565 MOB2Q70IA6 237 aa14.25□□□□□ -0.13
APOBEC3F-202ENST00000381565 WDR66Q8TBY9 1149 aa14.25□□□□□ -0.13
APOBEC3F-202ENST00000381565 GPR108Q9NPR9 543 aa14.25□□□□□ -0.13
APOBEC3F-202ENST00000381565 EXOC6BQ9Y2D4 811 aa14.25□□□□□ -0.13
APOBEC3F-202ENST00000381565 FPGT-TNNI3KV9GXZ4 949 aa14.25□□□□□ -0.13
APOBEC3F-202ENST00000381565 ARID4AP29374 1257 aaPredicted RBP14.24□□□□□ -0.13
APOBEC3F-202ENST00000381565 HDLBPQ00341 1268 aaKnown RBP14.24□□□□□ -0.13
APOBEC3F-202ENST00000381565 OS9Q13438 667 aaPredicted RBP14.24□□□□□ -0.13
APOBEC3F-202ENST00000381565 PI16Q6UXB8 463 aa14.24□□□□□ -0.13
APOBEC3F-202ENST00000381565 NEUROD6Q96NK8 337 aa14.24□□□□□ -0.13
APOBEC3F-202ENST00000381565 GNL3LQ9NVN8 582 aaKnown RBP14.24□□□□□ -0.13
APOBEC3F-202ENST00000381565 DENND2AQ9ULE3 1009 aa14.24□□□□□ -0.13
APOBEC3F-202ENST00000381565 SUGT1Q9Y2Z0 365 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms