RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 AOX1Q06278 1338 aa20.17■□□□□ 0.82
VCX3A-201ENST00000381089 CRKP46108 304 aa20.16■□□□□ 0.82
VCX3A-201ENST00000381089 GTF2A2P52657 109 aa20.16■□□□□ 0.82
VCX3A-201ENST00000381089 CAVIN4Q5BKX8 364 aa20.16■□□□□ 0.82
VCX3A-201ENST00000381089 TBC1D22AQ8WUA7 517 aa20.16■□□□□ 0.82
VCX3A-201ENST00000381089 ARAP2Q8WZ64 1704 aa20.16■□□□□ 0.82
VCX3A-201ENST00000381089 HTTP42858 3142 aa20.15■□□□□ 0.82
VCX3A-201ENST00000381089 TCP10L2B9ZVM9 353 aa20.15■□□□□ 0.82
VCX3A-201ENST00000381089 PTPN18Q99952 460 aa20.15■□□□□ 0.82
VCX3A-201ENST00000381089 ZFYVE28Q9HCC9 887 aa20.15■□□□□ 0.82
VCX3A-201ENST00000381089 TMOD2Q9NZR1 351 aa20.15■□□□□ 0.82
VCX3A-201ENST00000381089 OTOFQ9HC10 1997 aa20.14■□□□□ 0.81
VCX3A-201ENST00000381089 MAP3K9P80192 1104 aa20.14■□□□□ 0.81
VCX3A-201ENST00000381089 HDLBPQ00341 1268 aaKnown RBP20.14■□□□□ 0.81
VCX3A-201ENST00000381089 ARMC5Q96C12 935 aa20.14■□□□□ 0.81
VCX3A-201ENST00000381089 HOOK2Q96ED9 719 aa20.14■□□□□ 0.81
VCX3A-201ENST00000381089 SUCLG2Q96I99 432 aa20.14■□□□□ 0.81
VCX3A-201ENST00000381089 CCL15-CCL14A0A0B4J2E2 113 aa20.13■□□□□ 0.81
VCX3A-201ENST00000381089 POTEFA5A3E0 1075 aa20.13■□□□□ 0.81
VCX3A-201ENST00000381089 CHAF1AQ13111 956 aaPredicted RBP20.13■□□□□ 0.81
VCX3A-201ENST00000381089 VGLL4Q14135 290 aa20.13■□□□□ 0.81
VCX3A-201ENST00000381089 TAF1CQ15572 869 aaPredicted RBP20.13■□□□□ 0.81
VCX3A-201ENST00000381089 CCL15Q16663 113 aa20.13■□□□□ 0.81
VCX3A-201ENST00000381089 METTL24Q5JXM2 366 aa20.13■□□□□ 0.81
VCX3A-201ENST00000381089 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.13■□□□□ 0.81
VCX3A-201ENST00000381089 NBPF11Q86T75 865 aa20.13■□□□□ 0.81
VCX3A-201ENST00000381089 TEKT1Q969V4 418 aa20.13■□□□□ 0.81
VCX3A-201ENST00000381089 MS4A4AQ96JQ5 239 aa20.13■□□□□ 0.81
VCX3A-201ENST00000381089 TEPSINQ96N21 525 aa20.13■□□□□ 0.81
VCX3A-201ENST00000381089 TMEM106CQ9BVX2 250 aa20.13■□□□□ 0.81
VCX3A-201ENST00000381089 PUS3Q9BZE2 481 aaKnown RBP20.13■□□□□ 0.81
VCX3A-201ENST00000381089 TMEM39BQ9GZU3 492 aa20.13■□□□□ 0.81
VCX3A-201ENST00000381089 RIPOR2Q9Y4F9 1068 aa20.13■□□□□ 0.81
VCX3A-201ENST00000381089 ZNF316A6NFI3 1004 aaPredicted RBP20.12■□□□□ 0.81
VCX3A-201ENST00000381089 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.12■□□□□ 0.81
VCX3A-201ENST00000381089 CENPFP49454 3210 aa20.12■□□□□ 0.81
VCX3A-201ENST00000381089 RBBP6Q7Z6E9 1792 aaKnown RBP20.11■□□□□ 0.81
VCX3A-201ENST00000381089 MAST3O60307 1309 aa20.11■□□□□ 0.81
VCX3A-201ENST00000381089 FBXO33Q7Z6M2 555 aa20.11■□□□□ 0.81
VCX3A-201ENST00000381089 BRI3BPQ8WY22 251 aa20.11■□□□□ 0.81
VCX3A-201ENST00000381089 OTUD5Q96G74 571 aa20.11■□□□□ 0.81
VCX3A-201ENST00000381089 SPINK5Q9NQ38 1064 aaPredicted RBP20.11■□□□□ 0.81
VCX3A-201ENST00000381089 KIAA0100Q14667 2235 aaKnown RBP20.11■□□□□ 0.81
VCX3A-201ENST00000381089 UTYO14607 1347 aa20.1■□□□□ 0.81
VCX3A-201ENST00000381089 NBPF7P0C2Y1 421 aaPredicted RBP20.1■□□□□ 0.81
VCX3A-201ENST00000381089 KIF22Q14807 665 aa20.1■□□□□ 0.81
VCX3A-201ENST00000381089 SLC9C1Q4G0N8 1177 aa20.1■□□□□ 0.81
VCX3A-201ENST00000381089 BICC1Q9H694 974 aaKnown RBP20.1■□□□□ 0.81
VCX3A-201ENST00000381089 IQSEC3Q9UPP2 1182 aaPredicted RBP20.1■□□□□ 0.81
VCX3A-201ENST00000381089 CETPP11597 493 aa20.09■□□□□ 0.81
VCX3A-201ENST00000381089 RABL6Q3YEC7 729 aaPredicted RBP20.09■□□□□ 0.81
VCX3A-201ENST00000381089 CDAN1Q8IWY9 1227 aa20.09■□□□□ 0.81
VCX3A-201ENST00000381089 CNKSR2Q8WXI2 1034 aa20.09■□□□□ 0.81
VCX3A-201ENST00000381089 KAZALD1Q96I82 304 aa20.09■□□□□ 0.81
VCX3A-201ENST00000381089 SUGT1Q9Y2Z0 365 aa20.09■□□□□ 0.81
VCX3A-201ENST00000381089 MKI67P46013 3256 aaKnown RBP20.09■□□□□ 0.81
VCX3A-201ENST00000381089 SPDYE5A6NIY4 337 aa20.08■□□□□ 0.81
VCX3A-201ENST00000381089 PDE8BO95263 885 aa20.08■□□□□ 0.81
VCX3A-201ENST00000381089 DCAF15Q66K64 600 aa20.08■□□□□ 0.81
VCX3A-201ENST00000381089 FAM83AQ86UY5 434 aa20.08■□□□□ 0.81
VCX3A-201ENST00000381089 ERO1BQ86YB8 467 aa20.08■□□□□ 0.81
VCX3A-201ENST00000381089 ZDHHC15Q96MV8 337 aa20.08■□□□□ 0.81
VCX3A-201ENST00000381089 WRNIP1Q96S55 665 aa20.08■□□□□ 0.81
VCX3A-201ENST00000381089 MRIQ9BWK5 157 aa20.08■□□□□ 0.81
VCX3A-201ENST00000381089 ZCCHC17Q9NP64 241 aaKnown RBP20.08■□□□□ 0.81
VCX3A-201ENST00000381089 IFIT1P09914 478 aaKnown RBP20.07■□□□□ 0.8
VCX3A-201ENST00000381089 SNAPC2Q13487 334 aa20.07■□□□□ 0.8
VCX3A-201ENST00000381089 LRRC24Q50LG9 513 aa20.07■□□□□ 0.8
VCX3A-201ENST00000381089 FKBP1CQ5VVH2 108 aa20.07■□□□□ 0.8
VCX3A-201ENST00000381089 ZNF333Q96JL9 665 aa20.07■□□□□ 0.8
VCX3A-201ENST00000381089 KIF16BQ96L93 1317 aa20.06■□□□□ 0.8
VCX3A-201ENST00000381089 EN2P19622 333 aaPredicted RBP20.06■□□□□ 0.8
VCX3A-201ENST00000381089 CACNB3P54284 484 aa20.06■□□□□ 0.8
VCX3A-201ENST00000381089 PUM3Q15397 648 aaKnown RBP20.06■□□□□ 0.8
VCX3A-201ENST00000381089 SLC4A8Q2Y0W8 1093 aa20.06■□□□□ 0.8
VCX3A-201ENST00000381089 FAM9BQ8IZU0 186 aa20.06■□□□□ 0.8
VCX3A-201ENST00000381089 FAM43AQ8N2R8 423 aa20.06■□□□□ 0.8
VCX3A-201ENST00000381089 PTCH2Q9Y6C5 1203 aa20.06■□□□□ 0.8
VCX3A-201ENST00000381089 PTPRCP08575 1304 aa20.05■□□□□ 0.8
VCX3A-201ENST00000381089 GNRH1P01148 92 aa20.05■□□□□ 0.8
VCX3A-201ENST00000381089 GRIK5Q16478 980 aa20.05■□□□□ 0.8
VCX3A-201ENST00000381089 HABP4Q5JVS0 413 aaKnown RBP20.05■□□□□ 0.8
VCX3A-201ENST00000381089 TLR2O60603 784 aa20.04■□□□□ 0.8
VCX3A-201ENST00000381089 BCAMP50895 628 aa20.04■□□□□ 0.8
VCX3A-201ENST00000381089 PPIL2Q13356 520 aa20.04■□□□□ 0.8
VCX3A-201ENST00000381089 HHIPL2Q6UWX4 724 aa20.04■□□□□ 0.8
VCX3A-201ENST00000381089 ANKRD44Q8N8A2 993 aa20.04■□□□□ 0.8
VCX3A-201ENST00000381089 VGLL2Q8N8G2 317 aa20.04■□□□□ 0.8
VCX3A-201ENST00000381089 SNCAIPQ9Y6H5 919 aa20.04■□□□□ 0.8
VCX3A-201ENST00000381089 RPAP1Q9BWH6 1393 aaPredicted RBP20.04■□□□□ 0.8
VCX3A-201ENST00000381089 SLC5A1P13866 664 aa20.03■□□□□ 0.8
VCX3A-201ENST00000381089 WDR66Q8TBY9 1149 aa20.03■□□□□ 0.8
VCX3A-201ENST00000381089 ZKSCAN4Q969J2 545 aaPredicted RBP20.03■□□□□ 0.8
VCX3A-201ENST00000381089 ZNF341Q9BYN7 854 aa20.03■□□□□ 0.8
VCX3A-201ENST00000381089 BRCA2P51587 3418 aa20.02■□□□□ 0.8
VCX3A-201ENST00000381089 BTBD19C9JJ37 291 aa20.02■□□□□ 0.8
VCX3A-201ENST00000381089 IRF6O14896 467 aa20.02■□□□□ 0.8
VCX3A-201ENST00000381089 PRMT2P55345 433 aa20.02■□□□□ 0.8
VCX3A-201ENST00000381089 LACTBP83111 547 aaPredicted RBP20.02■□□□□ 0.8
VCX3A-201ENST00000381089 CAP1Q01518 475 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms