RNA–Protein interactions for RNA: ENST00000380743.8

SMN2-203, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-203ENST00000380743 SUGT1Q9Y2Z0 365 aa15.41■□□□□ 0.06
SMN2-203ENST00000380743 YY1P25490 414 aa15.4■□□□□ 0.06
SMN2-203ENST00000380743 SPTY2D1Q68D10 685 aaPredicted RBP15.4■□□□□ 0.06
SMN2-203ENST00000380743 LRP2BPQ9P2M1 347 aa15.4■□□□□ 0.06
SMN2-203ENST00000380743 ZNF280AP59817 542 aaPredicted RBP15.39■□□□□ 0.05
SMN2-203ENST00000380743 TTF1Q15361 905 aaPredicted RBP15.39■□□□□ 0.05
SMN2-203ENST00000380743 ERICH6Q7L0X2 663 aa15.39■□□□□ 0.05
SMN2-203ENST00000380743 OGFOD1Q8N543 542 aa15.39■□□□□ 0.05
SMN2-203ENST00000380743 ZNF384Q8TF68 577 aa15.39■□□□□ 0.05
SMN2-203ENST00000380743 RRAGCQ9HB90 399 aa15.39■□□□□ 0.05
SMN2-203ENST00000380743 WDR90Q96KV7 1748 aa15.39■□□□□ 0.05
SMN2-203ENST00000380743 IDH1O75874 414 aaKnown RBP15.38■□□□□ 0.05
SMN2-203ENST00000380743 EGFRP00533 1210 aa15.38■□□□□ 0.05
SMN2-203ENST00000380743 LMOD1P29536 600 aaPredicted RBP15.38■□□□□ 0.05
SMN2-203ENST00000380743 RGS3P49796 1198 aa15.38■□□□□ 0.05
SMN2-203ENST00000380743 MECOMQ03112 1051 aa15.38■□□□□ 0.05
SMN2-203ENST00000380743 DIXDC1Q155Q3 683 aa15.38■□□□□ 0.05
SMN2-203ENST00000380743 SAMD7Q7Z3H4 446 aa15.38■□□□□ 0.05
SMN2-203ENST00000380743 NSUN4Q96CB9 384 aaKnown RBP15.38■□□□□ 0.05
SMN2-203ENST00000380743 RAI14Q9P0K7 980 aa15.38■□□□□ 0.05
SMN2-203ENST00000380743 HACL1Q9UJ83 578 aa15.38■□□□□ 0.05
SMN2-203ENST00000380743 MYO5AQ9Y4I1 1855 aaKnown RBP15.38■□□□□ 0.05
SMN2-203ENST00000380743 H7C1D1 291 aa15.38■□□□□ 0.05
SMN2-203ENST00000380743 DZIP1Q86YF9 867 aaKnown RBP15.38■□□□□ 0.05
SMN2-203ENST00000380743 MYOZ2Q9NPC6 264 aa15.38■□□□□ 0.05
SMN2-203ENST00000380743 NMRK2Q9NPI5 230 aa15.38■□□□□ 0.05
SMN2-203ENST00000380743 PCDHAC2Q9Y5I4 1007 aa15.38■□□□□ 0.05
SMN2-203ENST00000380743 IQCA1LA6NCM1 817 aa15.37■□□□□ 0.05
SMN2-203ENST00000380743 GSPT1P15170 499 aaKnown RBP15.37■□□□□ 0.05
SMN2-203ENST00000380743 TBC1D10BQ4KMP7 808 aaPredicted RBP15.37■□□□□ 0.05
SMN2-203ENST00000380743 TTC22Q5TAA0 569 aa15.37■□□□□ 0.05
SMN2-203ENST00000380743 SERPINA10Q9UK55 444 aa15.37■□□□□ 0.05
SMN2-203ENST00000380743 HDAC9Q9UKV0 1011 aa15.37■□□□□ 0.05
SMN2-203ENST00000380743 TRIM6-TRIM34B2RNG4 842 aa15.36■□□□□ 0.05
SMN2-203ENST00000380743 CHGBP05060 677 aa15.36■□□□□ 0.05
SMN2-203ENST00000380743 VEGFAP15692 232 aaPredicted RBP15.36■□□□□ 0.05
SMN2-203ENST00000380743 EPHX2P34913 555 aa15.36■□□□□ 0.05
SMN2-203ENST00000380743 CRKP46108 304 aa15.36■□□□□ 0.05
SMN2-203ENST00000380743 MMP14P50281 582 aa15.36■□□□□ 0.05
SMN2-203ENST00000380743 MAP3K12Q12852 859 aa15.36■□□□□ 0.05
SMN2-203ENST00000380743 RBM26Q5T8P6 1007 aaKnown RBP15.36■□□□□ 0.05
SMN2-203ENST00000380743 KBTBD3Q8NAB2 608 aa15.36■□□□□ 0.05
SMN2-203ENST00000380743 TRPM4Q8TD43 1214 aa15.36■□□□□ 0.05
SMN2-203ENST00000380743 TEKT1Q969V4 418 aa15.36■□□□□ 0.05
SMN2-203ENST00000380743 MRIQ9BWK5 157 aa15.36■□□□□ 0.05
SMN2-203ENST00000380743 TAF1DQ9H5J8 278 aaPredicted RBP15.36■□□□□ 0.05
SMN2-203ENST00000380743 ADARB2Q9NS39 739 aaKnown RBP15.36■□□□□ 0.05
SMN2-203ENST00000380743 MAST3O60307 1309 aa15.36■□□□□ 0.05
SMN2-203ENST00000380743 SCN4AP35499 1836 aa15.35■□□□□ 0.05
SMN2-203ENST00000380743 RBM5P52756 815 aaKnown RBP eCLIP15.35■□□□□ 0.05
SMN2-203ENST00000380743 HIRAP54198 1017 aaPredicted RBP15.35■□□□□ 0.05
SMN2-203ENST00000380743 HDLBPQ00341 1268 aaKnown RBP15.35■□□□□ 0.05
SMN2-203ENST00000380743 C1QBPQ07021 282 aaKnown RBP15.35■□□□□ 0.05
SMN2-203ENST00000380743 CFAP100Q494V2 611 aa15.35■□□□□ 0.05
SMN2-203ENST00000380743 SLFNL1Q499Z3 407 aa15.35■□□□□ 0.05
SMN2-203ENST00000380743 SLC9C2Q5TAH2 1124 aa15.35■□□□□ 0.05
SMN2-203ENST00000380743 NAA16Q6N069 864 aaPredicted RBP15.35■□□□□ 0.05
SMN2-203ENST00000380743 HHIPL2Q6UWX4 724 aa15.35■□□□□ 0.05
SMN2-203ENST00000380743 MAGEB6Q8N7X4 407 aa15.35■□□□□ 0.05
SMN2-203ENST00000380743 DOCK2Q92608 1830 aa15.35■□□□□ 0.05
SMN2-203ENST00000380743 EVI5LQ96CN4 794 aa15.35■□□□□ 0.05
SMN2-203ENST00000380743 GPBP1L1Q9HC44 474 aaPredicted RBP15.35■□□□□ 0.05
SMN2-203ENST00000380743 PDE6AP16499 860 aa15.34■□□□□ 0.05
SMN2-203ENST00000380743 KIF4BQ2VIQ3 1234 aa15.34■□□□□ 0.05
SMN2-203ENST00000380743 NBPF9Q3BBW0 867 aa15.34■□□□□ 0.05
SMN2-203ENST00000380743 ADGRA1Q86SQ6 560 aa15.34■□□□□ 0.05
SMN2-203ENST00000380743 ZNF784Q8NCA9 323 aaPredicted RBP15.34■□□□□ 0.05
SMN2-203ENST00000380743 MTMR14Q8NCE2 650 aa15.34■□□□□ 0.05
SMN2-203ENST00000380743 RILPL2Q969X0 211 aa15.34■□□□□ 0.05
SMN2-203ENST00000380743 ZBED3Q96IU2 234 aaPredicted RBP15.34■□□□□ 0.05
SMN2-203ENST00000380743 PRMT6Q96LA8 375 aaPredicted RBP15.34■□□□□ 0.05
SMN2-203ENST00000380743 DAGLAQ9Y4D2 1042 aa15.34■□□□□ 0.05
SMN2-203ENST00000380743 ADAMTSL1Q8N6G6 1762 aa15.34■□□□□ 0.05
SMN2-203ENST00000380743 TCRBV5S4A2TA0A5A2 114 aa15.33■□□□□ 0.05
SMN2-203ENST00000380743 SPDYE2BA6NHP3 402 aa15.33■□□□□ 0.05
SMN2-203ENST00000380743 WNT10BO00744 389 aa15.33■□□□□ 0.05
SMN2-203ENST00000380743 IGSF3O75054 1194 aa15.33■□□□□ 0.05
SMN2-203ENST00000380743 SPDYE6P0CI01 402 aa15.33■□□□□ 0.05
SMN2-203ENST00000380743 SDSP20132 328 aa15.33■□□□□ 0.05
SMN2-203ENST00000380743 GSTO1P78417 241 aa15.33■□□□□ 0.05
SMN2-203ENST00000380743 DLGAP5Q15398 846 aa15.33■□□□□ 0.05
SMN2-203ENST00000380743 APOBEC3HQ6NTF7 200 aaKnown RBP15.33■□□□□ 0.05
SMN2-203ENST00000380743 CNTROBQ8N137 903 aa15.33■□□□□ 0.05
SMN2-203ENST00000380743 FAM163AQ96GL9 167 aaPredicted RBP15.33■□□□□ 0.05
SMN2-203ENST00000380743 ZDHHC15Q96MV8 337 aa15.33■□□□□ 0.05
SMN2-203ENST00000380743 FSD1Q9BTV5 496 aa15.33■□□□□ 0.05
SMN2-203ENST00000380743 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.33■□□□□ 0.05
SMN2-203ENST00000380743 MROH7-TTC4A0A0A0MT08 1334 aa15.33■□□□□ 0.04
SMN2-203ENST00000380743 GAKO14976 1311 aa15.33■□□□□ 0.04
SMN2-203ENST00000380743 ZNF532Q9HCE3 1301 aa15.33■□□□□ 0.04
SMN2-203ENST00000380743 CYP7A1P22680 504 aa15.33■□□□□ 0.04
SMN2-203ENST00000380743 ADD2P35612 726 aa15.33■□□□□ 0.04
SMN2-203ENST00000380743 USP50Q70EL3 339 aaPredicted RBP15.33■□□□□ 0.04
SMN2-203ENST00000380743 SLF2Q8IX21 1173 aa15.33■□□□□ 0.04
SMN2-203ENST00000380743 ASTN2O75129 1339 aaPredicted RBP15.32■□□□□ 0.04
SMN2-203ENST00000380743 MYH2Q9UKX2 1941 aa15.32■□□□□ 0.04
SMN2-203ENST00000380743 LDHCP07864 332 aa15.32■□□□□ 0.04
SMN2-203ENST00000380743 POTEIP0CG38 1075 aa15.32■□□□□ 0.04
SMN2-203ENST00000380743 POTEJP0CG39 1038 aa15.32■□□□□ 0.04
SMN2-203ENST00000380743 EAPPQ56P03 285 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms