RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 TTF2Q9UNY4 1162 aaKnown RBP22.81■■□□□ 1.24
SMN2-202ENST00000380742 TRIM6-TRIM34B2RNG4 842 aa22.8■■□□□ 1.24
SMN2-202ENST00000380742 IDH1O75874 414 aaKnown RBP22.8■■□□□ 1.24
SMN2-202ENST00000380742 MECOMQ03112 1051 aa22.8■■□□□ 1.24
SMN2-202ENST00000380742 KBTBD3Q8NAB2 608 aa22.8■■□□□ 1.24
SMN2-202ENST00000380742 EVI5LQ96CN4 794 aa22.8■■□□□ 1.24
SMN2-202ENST00000380742 USP17L8P0C7I0 530 aa22.79■■□□□ 1.24
SMN2-202ENST00000380742 RILPL2Q969X0 211 aa22.79■■□□□ 1.24
SMN2-202ENST00000380742 NSUN4Q96CB9 384 aaKnown RBP22.79■■□□□ 1.24
SMN2-202ENST00000380742 L3MBTL3Q96JM7 780 aaPredicted RBP22.79■■□□□ 1.24
SMN2-202ENST00000380742 GPRC5DQ9NZD1 345 aa22.79■■□□□ 1.24
SMN2-202ENST00000380742 CNOT7Q9UIV1 285 aaKnown RBP22.79■■□□□ 1.24
SMN2-202ENST00000380742 SDSP20132 328 aa22.78■■□□□ 1.24
SMN2-202ENST00000380742 MAP3K12Q12852 859 aa22.78■■□□□ 1.24
SMN2-202ENST00000380742 DZIP1Q86YF9 867 aaKnown RBP22.78■■□□□ 1.24
SMN2-202ENST00000380742 MICALL2Q8IY33 904 aa22.78■■□□□ 1.24
SMN2-202ENST00000380742 CNTROBQ8N137 903 aa22.78■■□□□ 1.24
SMN2-202ENST00000380742 CHGBP05060 677 aa22.77■■□□□ 1.24
SMN2-202ENST00000380742 ZNF280AP59817 542 aaPredicted RBP22.77■■□□□ 1.24
SMN2-202ENST00000380742 DIXDC1Q155Q3 683 aa22.77■■□□□ 1.24
SMN2-202ENST00000380742 FSD1Q9BTV5 496 aa22.77■■□□□ 1.24
SMN2-202ENST00000380742 MAST3O60307 1309 aa22.77■■□□□ 1.24
SMN2-202ENST00000380742 ECM29Q5VYK3 1845 aa22.77■■□□□ 1.24
SMN2-202ENST00000380742 POTECB2RU33 542 aa22.76■■□□□ 1.23
SMN2-202ENST00000380742 EPS15P42566 896 aa22.76■■□□□ 1.23
SMN2-202ENST00000380742 SLFNL1Q499Z3 407 aa22.76■■□□□ 1.23
SMN2-202ENST00000380742 MAGEB6Q8N7X4 407 aa22.76■■□□□ 1.23
SMN2-202ENST00000380742 HDAC9Q9UKV0 1011 aa22.76■■□□□ 1.23
SMN2-202ENST00000380742 IGSF3O75054 1194 aa22.76■■□□□ 1.23
SMN2-202ENST00000380742 PDE6AP16499 860 aa22.76■■□□□ 1.23
SMN2-202ENST00000380742 HDLBPQ00341 1268 aaKnown RBP22.76■■□□□ 1.23
SMN2-202ENST00000380742 BMP2KLQ5H9B9 411 aa22.76■■□□□ 1.23
SMN2-202ENST00000380742 SLC9C2Q5TAH2 1124 aa22.76■■□□□ 1.23
SMN2-202ENST00000380742 NAA16Q6N069 864 aaPredicted RBP22.76■■□□□ 1.23
SMN2-202ENST00000380742 OGFOD1Q8N543 542 aa22.76■■□□□ 1.23
SMN2-202ENST00000380742 MRIQ9BWK5 157 aa22.76■■□□□ 1.23
SMN2-202ENST00000380742 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.76■■□□□ 1.23
SMN2-202ENST00000380742 PCDHAC2Q9Y5I4 1007 aa22.76■■□□□ 1.23
SMN2-202ENST00000380742 TCRBV5S4A2TA0A5A2 114 aa22.75■■□□□ 1.23
SMN2-202ENST00000380742 EGFRP00533 1210 aa22.75■■□□□ 1.23
SMN2-202ENST00000380742 ADD2P35612 726 aa22.75■■□□□ 1.23
SMN2-202ENST00000380742 CRKP46108 304 aa22.75■■□□□ 1.23
SMN2-202ENST00000380742 ADGRA1Q86SQ6 560 aa22.75■■□□□ 1.23
SMN2-202ENST00000380742 SERPINA10Q9UK55 444 aa22.75■■□□□ 1.23
SMN2-202ENST00000380742 H7C1D1 291 aa22.74■■□□□ 1.23
SMN2-202ENST00000380742 CYP7A1P22680 504 aa22.74■■□□□ 1.23
SMN2-202ENST00000380742 LMOD1P29536 600 aaPredicted RBP22.74■■□□□ 1.23
SMN2-202ENST00000380742 MMP14P50281 582 aa22.74■■□□□ 1.23
SMN2-202ENST00000380742 HHIPL2Q6UWX4 724 aa22.74■■□□□ 1.23
SMN2-202ENST00000380742 SAMD7Q7Z3H4 446 aa22.74■■□□□ 1.23
SMN2-202ENST00000380742 TEKT1Q969V4 418 aa22.74■■□□□ 1.23
SMN2-202ENST00000380742 FAM163AQ96GL9 167 aaPredicted RBP22.74■■□□□ 1.23
SMN2-202ENST00000380742 MYOZ2Q9NPC6 264 aa22.74■■□□□ 1.23
SMN2-202ENST00000380742 ZNF532Q9HCE3 1301 aa22.74■■□□□ 1.23
SMN2-202ENST00000380742 CDK5RAP2Q96SN8 1893 aa22.73■■□□□ 1.23
SMN2-202ENST00000380742 RNF113AO15541 343 aaKnown RBP22.73■■□□□ 1.23
SMN2-202ENST00000380742 GSTO1P78417 241 aa22.73■■□□□ 1.23
SMN2-202ENST00000380742 CFAP100Q494V2 611 aa22.73■■□□□ 1.23
SMN2-202ENST00000380742 ZSCAN25Q6NSZ9 544 aa22.73■■□□□ 1.23
SMN2-202ENST00000380742 ZNF526Q8TF50 670 aaPredicted RBP22.73■■□□□ 1.23
SMN2-202ENST00000380742 HACL1Q9UJ83 578 aa22.73■■□□□ 1.23
SMN2-202ENST00000380742 DAGLAQ9Y4D2 1042 aa22.73■■□□□ 1.23
SMN2-202ENST00000380742 MROH7-TTC4A0A0A0MT08 1334 aa22.73■■□□□ 1.23
SMN2-202ENST00000380742 GAKO14976 1311 aa22.73■■□□□ 1.23
SMN2-202ENST00000380742 LDHCP07864 332 aa22.72■■□□□ 1.23
SMN2-202ENST00000380742 UBE3CQ15386 1083 aa22.72■■□□□ 1.23
SMN2-202ENST00000380742 TBC1D10BQ4KMP7 808 aaPredicted RBP22.72■■□□□ 1.23
SMN2-202ENST00000380742 RBM26Q5T8P6 1007 aaKnown RBP22.72■■□□□ 1.23
SMN2-202ENST00000380742 SLF2Q8IX21 1173 aa22.72■■□□□ 1.23
SMN2-202ENST00000380742 ZDHHC15Q96MV8 337 aa22.72■■□□□ 1.23
SMN2-202ENST00000380742 RRAGCQ9HB90 399 aa22.72■■□□□ 1.23
SMN2-202ENST00000380742 RFX7Q2KHR2 1363 aa22.72■■□□□ 1.23
SMN2-202ENST00000380742 RBM5P52756 815 aaKnown RBP eCLIP22.71■■□□□ 1.23
SMN2-202ENST00000380742 TMED8Q6PL24 325 aaPredicted RBP22.71■■□□□ 1.23
SMN2-202ENST00000380742 MTMR14Q8NCE2 650 aa22.71■■□□□ 1.23
SMN2-202ENST00000380742 TRPM4Q8TD43 1214 aa22.71■■□□□ 1.23
SMN2-202ENST00000380742 ZBED3Q96IU2 234 aaPredicted RBP22.71■■□□□ 1.23
SMN2-202ENST00000380742 PRMT6Q96LA8 375 aaPredicted RBP22.71■■□□□ 1.23
SMN2-202ENST00000380742 ADARB2Q9NS39 739 aaKnown RBP22.71■■□□□ 1.23
SMN2-202ENST00000380742 POLR2AP24928 1970 aaKnown RBP22.71■■□□□ 1.23
SMN2-202ENST00000380742 IQCA1LA6NCM1 817 aa22.7■■□□□ 1.22
SMN2-202ENST00000380742 ZFYP08048 801 aaPredicted RBP22.7■■□□□ 1.22
SMN2-202ENST00000380742 DLGAP5Q15398 846 aa22.7■■□□□ 1.22
SMN2-202ENST00000380742 APOBEC3HQ6NTF7 200 aaKnown RBP22.7■■□□□ 1.22
SMN2-202ENST00000380742 TICAM2Q86XR7 235 aa22.7■■□□□ 1.22
SMN2-202ENST00000380742 NMRK2Q9NPI5 230 aa22.7■■□□□ 1.22
SMN2-202ENST00000380742 GPR75-ASB3A0A0A6YYF3 556 aa22.69■■□□□ 1.22
SMN2-202ENST00000380742 SPDYE2BA6NHP3 402 aa22.69■■□□□ 1.22
SMN2-202ENST00000380742 SPDYE6P0CI01 402 aa22.69■■□□□ 1.22
SMN2-202ENST00000380742 EPHX2P34913 555 aa22.69■■□□□ 1.22
SMN2-202ENST00000380742 HIRAP54198 1017 aaPredicted RBP22.69■■□□□ 1.22
SMN2-202ENST00000380742 KIF4BQ2VIQ3 1234 aa22.69■■□□□ 1.22
SMN2-202ENST00000380742 LRRFIP1Q32MZ4 808 aaKnown RBP22.69■■□□□ 1.22
SMN2-202ENST00000380742 TAF1DQ9H5J8 278 aaPredicted RBP22.69■■□□□ 1.22
SMN2-202ENST00000380742 FOCADQ5VW36 1801 aa22.69■■□□□ 1.22
SMN2-202ENST00000380742 WNT10BO00744 389 aa22.68■■□□□ 1.22
SMN2-202ENST00000380742 VEGFAP15692 232 aaPredicted RBP22.68■■□□□ 1.22
SMN2-202ENST00000380742 BTDP43251 543 aa22.68■■□□□ 1.22
SMN2-202ENST00000380742 NBPF9Q3BBW0 867 aa22.68■■□□□ 1.22
SMN2-202ENST00000380742 ZMYM1Q5SVZ6 1142 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms