RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 NTSR2O95665 410 aa12.69□□□□□ -0.38
NEDD9-201ENST00000379433 PDE6AP16499 860 aa12.69□□□□□ -0.38
NEDD9-201ENST00000379433 NFXL1Q6ZNB6 911 aa12.69□□□□□ -0.38
NEDD9-201ENST00000379433 SDR42E1Q8WUS8 393 aa12.69□□□□□ -0.38
NEDD9-201ENST00000379433 APPBP2Q92624 585 aa12.69□□□□□ -0.38
NEDD9-201ENST00000379433 GPR108Q9NPR9 543 aa12.69□□□□□ -0.38
NEDD9-201ENST00000379433 TDO2P48775 406 aa12.68□□□□□ -0.38
NEDD9-201ENST00000379433 TRDNQ13061 729 aa12.68□□□□□ -0.38
NEDD9-201ENST00000379433 ANKRD1Q15327 319 aa12.68□□□□□ -0.38
NEDD9-201ENST00000379433 MICU3Q86XE3 530 aa12.68□□□□□ -0.38
NEDD9-201ENST00000379433 SEPT12Q8IYM1 358 aa12.68□□□□□ -0.38
NEDD9-201ENST00000379433 FBXO41Q8TF61 875 aa12.68□□□□□ -0.38
NEDD9-201ENST00000379433 ARID4AP29374 1257 aaPredicted RBP12.68□□□□□ -0.38
NEDD9-201ENST00000379433 ARHGEF1Q92888 912 aaKnown RBP12.68□□□□□ -0.38
NEDD9-201ENST00000379433 AK7Q96M32 723 aa12.68□□□□□ -0.38
NEDD9-201ENST00000379433 SHANK3Q9BYB0 1731 aa12.68□□□□□ -0.38
NEDD9-201ENST00000379433 KLF18A0A0U1RQI7 1052 aa12.68□□□□□ -0.38
NEDD9-201ENST00000379433 CPLX1O14810 134 aa12.68□□□□□ -0.38
NEDD9-201ENST00000379433 PRC1O43663 620 aa12.68□□□□□ -0.38
NEDD9-201ENST00000379433 POLD1P28340 1107 aa12.68□□□□□ -0.38
NEDD9-201ENST00000379433 GIMAP6Q6P9H5 292 aa12.68□□□□□ -0.38
NEDD9-201ENST00000379433 PLA2G12BQ9BX93 195 aa12.68□□□□□ -0.38
NEDD9-201ENST00000379433 RBSNQ9H1K0 784 aa12.68□□□□□ -0.38
NEDD9-201ENST00000379433 ANKIB1Q9P2G1 1089 aa12.68□□□□□ -0.38
NEDD9-201ENST00000379433 CDHR2Q9BYE9 1310 aa12.67□□□□□ -0.38
NEDD9-201ENST00000379433 GOLGA8BA8MQT2 603 aa12.67□□□□□ -0.38
NEDD9-201ENST00000379433 PRDM1O75626 825 aa12.67□□□□□ -0.38
NEDD9-201ENST00000379433 POLR3DP05423 398 aaPredicted RBP12.67□□□□□ -0.38
NEDD9-201ENST00000379433 LRRFIP1Q32MZ4 808 aaKnown RBP12.67□□□□□ -0.38
NEDD9-201ENST00000379433 BARGINQ6ZT62 677 aa12.67□□□□□ -0.38
NEDD9-201ENST00000379433 CMTR1Q8N1G2 835 aaKnown RBP12.67□□□□□ -0.38
NEDD9-201ENST00000379433 ABCC6O95255 1503 aa12.67□□□□□ -0.38
NEDD9-201ENST00000379433 N4BP2Q86UW6 1770 aaPredicted RBP12.67□□□□□ -0.38
NEDD9-201ENST00000379433 VPS72Q15906 364 aa12.67□□□□□ -0.38
NEDD9-201ENST00000379433 PIBF1Q8WXW3 757 aa12.67□□□□□ -0.38
NEDD9-201ENST00000379433 NAPBQ9H115 298 aa12.67□□□□□ -0.38
NEDD9-201ENST00000379433 RIC1Q4ADV7 1423 aa12.67□□□□□ -0.38
NEDD9-201ENST00000379433 LOC102724159A0A0B4J2E5 919 aa12.67□□□□□ -0.38
NEDD9-201ENST00000379433 PTPDC1A2A3K4 754 aa12.67□□□□□ -0.38
NEDD9-201ENST00000379433 MAP3K12Q12852 859 aa12.67□□□□□ -0.38
NEDD9-201ENST00000379433 PWP2Q15269 919 aaKnown RBP12.67□□□□□ -0.38
NEDD9-201ENST00000379433 PARP10Q53GL7 1025 aa12.67□□□□□ -0.38
NEDD9-201ENST00000379433 EXOC8Q8IYI6 725 aa12.67□□□□□ -0.38
NEDD9-201ENST00000379433 VGLL2Q8N8G2 317 aa12.67□□□□□ -0.38
NEDD9-201ENST00000379433 NLRP3Q96P20 1036 aa12.67□□□□□ -0.38
NEDD9-201ENST00000379433 CDC5LQ99459 802 aaKnown RBP12.67□□□□□ -0.38
NEDD9-201ENST00000379433 QTRT2Q9H974 415 aaKnown RBP12.67□□□□□ -0.38
NEDD9-201ENST00000379433 SENP2Q9HC62 589 aa12.67□□□□□ -0.38
NEDD9-201ENST00000379433 COL16A1Q07092 1604 aaPredicted RBP12.66□□□□□ -0.38
NEDD9-201ENST00000379433 COL14A1Q05707 1796 aaKnown RBP12.66□□□□□ -0.38
NEDD9-201ENST00000379433 CYP2D7A0A087X1C5 515 aa12.66□□□□□ -0.38
NEDD9-201ENST00000379433 FSD2A1L4K1 749 aa12.66□□□□□ -0.38
NEDD9-201ENST00000379433 CYP7A1P22680 504 aa12.66□□□□□ -0.38
NEDD9-201ENST00000379433 GJD4Q96KN9 370 aaPredicted RBP12.66□□□□□ -0.38
NEDD9-201ENST00000379433 SOCS7O14512 581 aa12.66□□□□□ -0.38
NEDD9-201ENST00000379433 ADD2P35612 726 aa12.66□□□□□ -0.38
NEDD9-201ENST00000379433 CKAP2LQ8IYA6 745 aa12.66□□□□□ -0.38
NEDD9-201ENST00000379433 BICD2Q8TD16 824 aa12.66□□□□□ -0.38
NEDD9-201ENST00000379433 GTF3C6Q969F1 213 aa12.66□□□□□ -0.38
NEDD9-201ENST00000379433 DSCC1Q9BVC3 393 aa12.66□□□□□ -0.38
NEDD9-201ENST00000379433 SLC4A4Q9Y6R1 1079 aa12.66□□□□□ -0.38
NEDD9-201ENST00000379433 MYH14Q7Z406 1995 aaKnown RBP12.65□□□□□ -0.38
NEDD9-201ENST00000379433 FOXP2O15409 715 aa12.65□□□□□ -0.38
NEDD9-201ENST00000379433 TBC1D10CQ8IV04 446 aa12.65□□□□□ -0.38
NEDD9-201ENST00000379433 LCORLQ8N3X6 602 aa12.65□□□□□ -0.38
NEDD9-201ENST00000379433 ATP6V1DQ9Y5K8 247 aa12.65□□□□□ -0.38
NEDD9-201ENST00000379433 DOT1LQ8TEK3 1739 aa12.65□□□□□ -0.38
NEDD9-201ENST00000379433 MROH5Q6ZUA9 1318 aa12.65□□□□□ -0.38
NEDD9-201ENST00000379433 TUBGCP6Q96RT7 1819 aa12.65□□□□□ -0.38
NEDD9-201ENST00000379433 UBE2Q2LH0YL09 131 aa12.65□□□□□ -0.38
NEDD9-201ENST00000379433 NUP133Q8WUM0 1156 aa12.65□□□□□ -0.38
NEDD9-201ENST00000379433 PHKBQ93100 1093 aa12.65□□□□□ -0.38
NEDD9-201ENST00000379433 AIFM3Q96NN9 605 aa12.65□□□□□ -0.38
NEDD9-201ENST00000379433 ZNF219Q9P2Y4 722 aaPredicted RBP12.65□□□□□ -0.38
NEDD9-201ENST00000379433 CTNNA3Q9UI47 895 aa12.65□□□□□ -0.38
NEDD9-201ENST00000379433 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.64□□□□□ -0.39
NEDD9-201ENST00000379433 EPB41L2O43491 1005 aaKnown RBP12.64□□□□□ -0.39
NEDD9-201ENST00000379433 ADD1P35611 737 aaKnown RBP12.64□□□□□ -0.39
NEDD9-201ENST00000379433 TRAPPC3LQ5T215 181 aa12.64□□□□□ -0.39
NEDD9-201ENST00000379433 ERCC4Q92889 916 aaPredicted RBP12.64□□□□□ -0.39
NEDD9-201ENST00000379433 SPATA32Q96LK8 384 aa12.64□□□□□ -0.39
NEDD9-201ENST00000379433 BCL2L12Q9HB09 334 aa12.64□□□□□ -0.39
NEDD9-201ENST00000379433 JCADQ9P266 1359 aa12.64□□□□□ -0.39
NEDD9-201ENST00000379433 LAMB4A4D0S4 1761 aa12.64□□□□□ -0.39
NEDD9-201ENST00000379433 ZFYP08048 801 aaPredicted RBP12.64□□□□□ -0.39
NEDD9-201ENST00000379433 ATP2B1P20020 1258 aa12.64□□□□□ -0.39
NEDD9-201ENST00000379433 DYNLL1P63167 89 aaKnown RBP12.64□□□□□ -0.39
NEDD9-201ENST00000379433 TXNRD3Q86VQ6 643 aa12.64□□□□□ -0.39
NEDD9-201ENST00000379433 LRRC4BQ9NT99 713 aa12.64□□□□□ -0.39
NEDD9-201ENST00000379433 BCL9LQ86UU0 1499 aa12.64□□□□□ -0.39
NEDD9-201ENST00000379433 A0A087WWV3 80 aa12.64□□□□□ -0.39
NEDD9-201ENST00000379433 PDIA3P30101 505 aaKnown RBP12.64□□□□□ -0.39
NEDD9-201ENST00000379433 KRT85P78386 507 aa12.64□□□□□ -0.39
NEDD9-201ENST00000379433 CAVIN4Q5BKX8 364 aa12.64□□□□□ -0.39
NEDD9-201ENST00000379433 TPTE2Q6XPS3 522 aa12.64□□□□□ -0.39
NEDD9-201ENST00000379433 TTC6Q86TZ1 520 aa12.64□□□□□ -0.39
NEDD9-201ENST00000379433 NCOA7Q8NI08 942 aa12.64□□□□□ -0.39
NEDD9-201ENST00000379433 MINPP1Q9UNW1 487 aa12.64□□□□□ -0.39
NEDD9-201ENST00000379433 ABCC12Q96J65 1359 aa12.63□□□□□ -0.39
NEDD9-201ENST00000379433 hCG_1642624A0A1W2PR95 340 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms