RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 CCL15Q16663 113 aa22.51■■□□□ 1.19
PDLIM4-202ENST00000379018 DZIP1LQ8IYY4 767 aaKnown RBP22.51■■□□□ 1.19
PDLIM4-202ENST00000379018 TDRD7Q8NHU6 1098 aaKnown RBP22.51■■□□□ 1.19
PDLIM4-202ENST00000379018 BRI3BPQ8WY22 251 aa22.51■■□□□ 1.19
PDLIM4-202ENST00000379018 OTUD5Q96G74 571 aa22.51■■□□□ 1.19
PDLIM4-202ENST00000379018 PUS3Q9BZE2 481 aaKnown RBP22.51■■□□□ 1.19
PDLIM4-202ENST00000379018 FAM205AQ6ZU69 1335 aa22.51■■□□□ 1.19
PDLIM4-202ENST00000379018 ARAP2Q8WZ64 1704 aa22.51■■□□□ 1.19
PDLIM4-202ENST00000379018 ECM2O94769 699 aaPredicted RBP22.5■■□□□ 1.19
PDLIM4-202ENST00000379018 CRKP46108 304 aa22.5■■□□□ 1.19
PDLIM4-202ENST00000379018 VGLL4Q14135 290 aa22.5■■□□□ 1.19
PDLIM4-202ENST00000379018 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.5■■□□□ 1.19
PDLIM4-202ENST00000379018 VPS37DQ86XT2 251 aa22.5■■□□□ 1.19
PDLIM4-202ENST00000379018 ARMC5Q96C12 935 aa22.5■■□□□ 1.19
PDLIM4-202ENST00000379018 TMEM106CQ9BVX2 250 aa22.5■■□□□ 1.19
PDLIM4-202ENST00000379018 SERPINA10Q9UK55 444 aa22.5■■□□□ 1.19
PDLIM4-202ENST00000379018 CSADQ9Y600 493 aa22.5■■□□□ 1.19
PDLIM4-202ENST00000379018 TESPA1A2RU30 521 aaPredicted RBP22.49■■□□□ 1.19
PDLIM4-202ENST00000379018 TNNI2P48788 182 aa22.49■■□□□ 1.19
PDLIM4-202ENST00000379018 CACNB3P54284 484 aa22.49■■□□□ 1.19
PDLIM4-202ENST00000379018 UBE4AQ14139 1066 aa22.49■■□□□ 1.19
PDLIM4-202ENST00000379018 MS4A4AQ96JQ5 239 aa22.49■■□□□ 1.19
PDLIM4-202ENST00000379018 FAM84BQ96KN1 310 aaPredicted RBP22.49■■□□□ 1.19
PDLIM4-202ENST00000379018 TEPSINQ96N21 525 aa22.49■■□□□ 1.19
PDLIM4-202ENST00000379018 ZFYVE28Q9HCC9 887 aa22.49■■□□□ 1.19
PDLIM4-202ENST00000379018 MRS2Q9HD23 443 aa22.49■■□□□ 1.19
PDLIM4-202ENST00000379018 PTCH2Q9Y6C5 1203 aa22.49■■□□□ 1.19
PDLIM4-202ENST00000379018 FRAT2O75474 233 aaPredicted RBP22.48■■□□□ 1.19
PDLIM4-202ENST00000379018 MAP3K9P80192 1104 aa22.48■■□□□ 1.19
PDLIM4-202ENST00000379018 GRIK5Q16478 980 aa22.48■■□□□ 1.19
PDLIM4-202ENST00000379018 SLC9C1Q4G0N8 1177 aa22.48■■□□□ 1.19
PDLIM4-202ENST00000379018 SUCLG2Q96I99 432 aa22.48■■□□□ 1.19
PDLIM4-202ENST00000379018 GTF2A2P52657 109 aa22.47■■□□□ 1.19
PDLIM4-202ENST00000379018 SLC4A8Q2Y0W8 1093 aa22.47■■□□□ 1.19
PDLIM4-202ENST00000379018 FAM43AQ8N2R8 423 aa22.47■■□□□ 1.19
PDLIM4-202ENST00000379018 ZSWIM8A7E2V4 1837 aa22.46■■□□□ 1.19
PDLIM4-202ENST00000379018 ZNF333Q96JL9 665 aa22.46■■□□□ 1.19
PDLIM4-202ENST00000379018 SRCIN1Q9C0H9 1055 aa22.46■■□□□ 1.19
PDLIM4-202ENST00000379018 WDR63Q8IWG1 891 aa22.45■■□□□ 1.18
PDLIM4-202ENST00000379018 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.45■■□□□ 1.182e-7■■□□□ 13.8
PDLIM4-202ENST00000379018 SPINK5Q9NQ38 1064 aaPredicted RBP22.45■■□□□ 1.18
PDLIM4-202ENST00000379018 ALDH1L1O75891 902 aa22.44■■□□□ 1.18
PDLIM4-202ENST00000379018 BRCA2P51587 3418 aa22.44■■□□□ 1.18
PDLIM4-202ENST00000379018 ARHGEF6Q15052 776 aa22.44■■□□□ 1.18
PDLIM4-202ENST00000379018 NBPF11Q86T75 865 aa22.44■■□□□ 1.18
PDLIM4-202ENST00000379018 ARHGAP39Q9C0H5 1083 aa22.44■■□□□ 1.18
PDLIM4-202ENST00000379018 METTL24Q5JXM2 366 aa22.43■■□□□ 1.18
PDLIM4-202ENST00000379018 WRNIP1Q96S55 665 aa22.43■■□□□ 1.18
PDLIM4-202ENST00000379018 TMOD2Q9NZR1 351 aa22.43■■□□□ 1.18
PDLIM4-202ENST00000379018 MROH5Q6ZUA9 1318 aa22.42■■□□□ 1.18
PDLIM4-202ENST00000379018 WDHD1O75717 1129 aaPredicted RBP22.42■■□□□ 1.18
PDLIM4-202ENST00000379018 LRRC24Q50LG9 513 aa22.42■■□□□ 1.18
PDLIM4-202ENST00000379018 SH3TC2Q8TF17 1288 aa22.42■■□□□ 1.18
PDLIM4-202ENST00000379018 ZKSCAN4Q969J2 545 aaPredicted RBP22.42■■□□□ 1.18
PDLIM4-202ENST00000379018 TEKT1Q969V4 418 aa22.42■■□□□ 1.18
PDLIM4-202ENST00000379018 NBPF7P0C2Y1 421 aaPredicted RBP22.41■■□□□ 1.18
PDLIM4-202ENST00000379018 KIF22Q14807 665 aa22.41■■□□□ 1.18
PDLIM4-202ENST00000379018 CAVIN4Q5BKX8 364 aa22.41■■□□□ 1.18
PDLIM4-202ENST00000379018 KAZALD1Q96I82 304 aa22.41■■□□□ 1.18
PDLIM4-202ENST00000379018 BICC1Q9H694 974 aaKnown RBP22.41■■□□□ 1.18
PDLIM4-202ENST00000379018 RIPOR2Q9Y4F9 1068 aa22.41■■□□□ 1.18
PDLIM4-202ENST00000379018 SNCAIPQ9Y6H5 919 aa22.41■■□□□ 1.18
PDLIM4-202ENST00000379018 SPDYE5A6NIY4 337 aa22.4■■□□□ 1.18
PDLIM4-202ENST00000379018 CETPP11597 493 aa22.4■■□□□ 1.18
PDLIM4-202ENST00000379018 FBXO33Q7Z6M2 555 aa22.4■■□□□ 1.18
PDLIM4-202ENST00000379018 BTBD19C9JJ37 291 aa22.39■■□□□ 1.17
PDLIM4-202ENST00000379018 NCBP3Q53F19 620 aaKnown RBP22.39■■□□□ 1.17
PDLIM4-202ENST00000379018 TBC1D22AQ8WUA7 517 aa22.39■■□□□ 1.17
PDLIM4-202ENST00000379018 IRF6O14896 467 aa22.38■■□□□ 1.17
PDLIM4-202ENST00000379018 BCAMP50895 628 aa22.38■■□□□ 1.17
PDLIM4-202ENST00000379018 SNAPC2Q13487 334 aa22.38■■□□□ 1.17
PDLIM4-202ENST00000379018 MIGA2Q7L4E1 593 aa22.38■■□□□ 1.17
PDLIM4-202ENST00000379018 ERO1BQ86YB8 467 aa22.38■■□□□ 1.17
PDLIM4-202ENST00000379018 KLHDC4Q8TBB5 520 aa22.38■■□□□ 1.17
PDLIM4-202ENST00000379018 AK9Q5TCS8 1911 aa22.37■■□□□ 1.17
PDLIM4-202ENST00000379018 TLR2O60603 784 aa22.37■■□□□ 1.17
PDLIM4-202ENST00000379018 FXR1P51114 621 aaKnown RBP eCLIP22.37■■□□□ 1.17
PDLIM4-202ENST00000379018 LACTBP83111 547 aaPredicted RBP22.37■■□□□ 1.17
PDLIM4-202ENST00000379018 COLQQ9Y215 455 aaPredicted RBP22.37■■□□□ 1.17
PDLIM4-202ENST00000379018 HDLBPQ00341 1268 aaKnown RBP22.36■■□□□ 1.17
PDLIM4-202ENST00000379018 CPA4Q9UI42 421 aa22.36■■□□□ 1.17
PDLIM4-202ENST00000379018 PPIL2Q13356 520 aa22.35■■□□□ 1.17
PDLIM4-202ENST00000379018 DCAF15Q66K64 600 aa22.35■■□□□ 1.17
PDLIM4-202ENST00000379018 ANKRD44Q8N8A2 993 aa22.35■■□□□ 1.17
PDLIM4-202ENST00000379018 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.35■■□□□ 1.17
PDLIM4-202ENST00000379018 ZDHHC15Q96MV8 337 aa22.35■■□□□ 1.17
PDLIM4-202ENST00000379018 CEP290O15078 2479 aa22.35■■□□□ 1.17
PDLIM4-202ENST00000379018 MAST3O60307 1309 aa22.34■■□□□ 1.17
PDLIM4-202ENST00000379018 MYH13Q9UKX3 1938 aa22.34■■□□□ 1.17
PDLIM4-202ENST00000379018 PDE8BO95263 885 aa22.34■■□□□ 1.17
PDLIM4-202ENST00000379018 INPP5BP32019 993 aa22.34■■□□□ 1.17
PDLIM4-202ENST00000379018 APOBEC3HQ6NTF7 200 aaKnown RBP22.34■■□□□ 1.17
PDLIM4-202ENST00000379018 TCP10Q12799 353 aa22.33■■□□□ 1.17
PDLIM4-202ENST00000379018 FAM83AQ86UY5 434 aa22.33■■□□□ 1.17
PDLIM4-202ENST00000379018 VGLL2Q8N8G2 317 aa22.33■■□□□ 1.17
PDLIM4-202ENST00000379018 HOOK2Q96ED9 719 aa22.33■■□□□ 1.17
PDLIM4-202ENST00000379018 ZNF341Q9BYN7 854 aa22.33■■□□□ 1.17
PDLIM4-202ENST00000379018 H0YGN5 161 aa22.32■■□□□ 1.16
PDLIM4-202ENST00000379018 ANP32CO43423 234 aa22.32■■□□□ 1.16
PDLIM4-202ENST00000379018 IFIT1P09914 478 aaKnown RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms