RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 STRBPQ96SI9 672 aaKnown RBP25.22■■□□□ 1.63
RNF38-205ENST00000377877 TAF6LQ9Y6J9 622 aa25.22■■□□□ 1.63
RNF38-205ENST00000377877 NAA16Q6N069 864 aaPredicted RBP25.21■■□□□ 1.63
RNF38-205ENST00000377877 KCNB2Q92953 911 aa25.21■■□□□ 1.63
RNF38-205ENST00000377877 DSCC1Q9BVC3 393 aa25.21■■□□□ 1.63
RNF38-205ENST00000377877 ARMT1Q9H993 441 aa25.21■■□□□ 1.63
RNF38-205ENST00000377877 FAM205AQ6ZU69 1335 aa25.21■■□□□ 1.63
RNF38-205ENST00000377877 BRCA1P38398 1863 aaKnown RBP25.21■■□□□ 1.63
RNF38-205ENST00000377877 G3V3G9 751 aa25.2■■□□□ 1.63
RNF38-205ENST00000377877 SLC27A2O14975 620 aa25.2■■□□□ 1.63
RNF38-205ENST00000377877 ANAPC15P60006 121 aa25.2■■□□□ 1.63
RNF38-205ENST00000377877 DCAF8Q5TAQ9 597 aa25.2■■□□□ 1.63
RNF38-205ENST00000377877 RTKN2Q8IZC4 609 aa25.2■■□□□ 1.63
RNF38-205ENST00000377877 MBD4O95243 580 aa25.2■■□□□ 1.62
RNF38-205ENST00000377877 LDHBP07195 334 aaKnown RBP25.2■■□□□ 1.62
RNF38-205ENST00000377877 SPTY2D1Q68D10 685 aaPredicted RBP25.2■■□□□ 1.62
RNF38-205ENST00000377877 AIDAQ96BJ3 306 aa25.2■■□□□ 1.62
RNF38-205ENST00000377877 IL17RAQ96F46 866 aa25.2■■□□□ 1.62
RNF38-205ENST00000377877 KIAA2012Q0VF49 1180 aa25.19■■□□□ 1.62
RNF38-205ENST00000377877 LCORLQ8N3X6 602 aa25.19■■□□□ 1.62
RNF38-205ENST00000377877 ZGPATQ8N5A5 531 aaKnown RBP25.19■■□□□ 1.62
RNF38-205ENST00000377877 MXD3Q9BW11 206 aa25.19■■□□□ 1.62
RNF38-205ENST00000377877 U3KPZ7 1027 aaPredicted RBP25.19■■□□□ 1.62
RNF38-205ENST00000377877 CD2BP2O95400 341 aaKnown RBP25.18■■□□□ 1.62
RNF38-205ENST00000377877 MFSD14BQ5SR56 506 aa25.18■■□□□ 1.62
RNF38-205ENST00000377877 TTLL5Q6EMB2 1281 aa25.18■■□□□ 1.62
RNF38-205ENST00000377877 SRCAPQ6ZRS2 3230 aa25.18■■□□□ 1.62
RNF38-205ENST00000377877 ADCK5Q3MIX3 580 aa25.18■■□□□ 1.62
RNF38-205ENST00000377877 GRIPAP1Q4V328 841 aa25.18■■□□□ 1.62
RNF38-205ENST00000377877 SUPT20HQ8NEM7 779 aa25.18■■□□□ 1.62
RNF38-205ENST00000377877 FBXW7Q969H0 707 aa25.18■■□□□ 1.62
RNF38-205ENST00000377877 CCDC88AQ3V6T2 1871 aa25.17■■□□□ 1.62
RNF38-205ENST00000377877 PRKAB2O43741 272 aa25.17■■□□□ 1.62
RNF38-205ENST00000377877 FGAP02671 866 aa25.17■■□□□ 1.62
RNF38-205ENST00000377877 DYNLL1P63167 89 aaKnown RBP25.17■■□□□ 1.62
RNF38-205ENST00000377877 RABEP1Q15276 862 aa25.17■■□□□ 1.62
RNF38-205ENST00000377877 PODNQ7Z5L7 613 aa25.17■■□□□ 1.62
RNF38-205ENST00000377877 PSMD1Q99460 953 aa25.17■■□□□ 1.62
RNF38-205ENST00000377877 ZNF277Q9NRM2 450 aaPredicted RBP25.17■■□□□ 1.62
RNF38-205ENST00000377877 PPIP5K2O43314 1243 aa25.16■■□□□ 1.62
RNF38-205ENST00000377877 ECE2O60344 883 aa25.16■■□□□ 1.62
RNF38-205ENST00000377877 CERS5Q8N5B7 392 aa25.16■■□□□ 1.62
RNF38-205ENST00000377877 RIOK1Q9BRS2 568 aaKnown RBP25.16■■□□□ 1.62
RNF38-205ENST00000377877 TBC1D2Q9BYX2 928 aa25.16■■□□□ 1.62
RNF38-205ENST00000377877 BCS1LQ9Y276 419 aa25.16■■□□□ 1.62
RNF38-205ENST00000377877 CYP21A2P08686 494 aa25.16■■□□□ 1.62
RNF38-205ENST00000377877 COL9A3Q14050 684 aaPredicted RBP25.16■■□□□ 1.62
RNF38-205ENST00000377877 DIXDC1Q155Q3 683 aa25.16■■□□□ 1.62
RNF38-205ENST00000377877 DZIP1Q86YF9 867 aaKnown RBP25.16■■□□□ 1.62
RNF38-205ENST00000377877 SCN9AQ15858 1988 aa25.16■■□□□ 1.62
RNF38-205ENST00000377877 MAGEB6P1A0A0J9YX57 407 aa25.15■■□□□ 1.62
RNF38-205ENST00000377877 BECN1Q14457 450 aa25.15■■□□□ 1.62
RNF38-205ENST00000377877 TBC1D22AQ8WUA7 517 aa25.14■■□□□ 1.62
RNF38-205ENST00000377877 UPF3BQ9BZI7 483 aaKnown RBP25.14■■□□□ 1.62
RNF38-205ENST00000377877 PATL2C9JE40 543 aaKnown RBP25.14■■□□□ 1.61
RNF38-205ENST00000377877 APPP05067 770 aa25.14■■□□□ 1.61
RNF38-205ENST00000377877 GSG1L2A8MUP6 293 aa25.13■■□□□ 1.61
RNF38-205ENST00000377877 ZKSCAN1P17029 563 aaPredicted RBP25.13■■□□□ 1.61
RNF38-205ENST00000377877 NEK4P51957 841 aa25.13■■□□□ 1.61
RNF38-205ENST00000377877 SOGA3Q5TF21 947 aa25.13■■□□□ 1.61
RNF38-205ENST00000377877 YDJCA8MPS7 323 aa25.13■■□□□ 1.61
RNF38-205ENST00000377877 CPA1P15085 419 aa25.13■■□□□ 1.61
RNF38-205ENST00000377877 AATFQ9NY61 560 aaKnown RBP eCLIP25.13■■□□□ 1.61
RNF38-205ENST00000377877 SLC4A4Q9Y6R1 1079 aa25.13■■□□□ 1.61
RNF38-205ENST00000377877 TSGA10IPQ3SY00 556 aa25.12■■□□□ 1.61
RNF38-205ENST00000377877 RNF20Q5VTR2 975 aa25.12■■□□□ 1.61
RNF38-205ENST00000377877 FHDC1Q9C0D6 1143 aaPredicted RBP25.12■■□□□ 1.61
RNF38-205ENST00000377877 EPB41L4AQ9HCS5 686 aaPredicted RBP25.12■■□□□ 1.61
RNF38-205ENST00000377877 IFNL3Q8IZI9 196 aa25.11■■□□□ 1.61
RNF38-205ENST00000377877 SNX21Q969T3 373 aa25.11■■□□□ 1.61
RNF38-205ENST00000377877 JAKMIP1Q96N16 626 aaKnown RBP25.11■■□□□ 1.61
RNF38-205ENST00000377877 COL4A5P29400 1685 aa25.11■■□□□ 1.61
RNF38-205ENST00000377877 MYH2Q9UKX2 1941 aa25.11■■□□□ 1.61
RNF38-205ENST00000377877 SDR42E1Q8WUS8 393 aa25.11■■□□□ 1.61
RNF38-205ENST00000377877 F8W031 263 aaPredicted RBP25.1■■□□□ 1.61
RNF38-205ENST00000377877 NFKBIEO00221 500 aa25.1■■□□□ 1.61
RNF38-205ENST00000377877 HAND2P61296 217 aa25.1■■□□□ 1.61
RNF38-205ENST00000377877 DACT2Q5SW24 774 aa25.1■■□□□ 1.61
RNF38-205ENST00000377877 STOX1Q6ZVD7 989 aa25.1■■□□□ 1.61
RNF38-205ENST00000377877 LARGE2Q8N3Y3 721 aa25.1■■□□□ 1.61
RNF38-205ENST00000377877 FER1L6Q2WGJ9 1857 aa25.1■■□□□ 1.61
RNF38-205ENST00000377877 GSE1Q14687 1217 aa25.09■■□□□ 1.61
RNF38-205ENST00000377877 STRIP1Q5VSL9 837 aa25.09■■□□□ 1.61
RNF38-205ENST00000377877 CTNNA3Q9UI47 895 aa25.09■■□□□ 1.61
RNF38-205ENST00000377877 MAST2Q6P0Q8 1798 aa25.09■■□□□ 1.61
RNF38-205ENST00000377877 IGSF3O75054 1194 aa25.09■■□□□ 1.61
RNF38-205ENST00000377877 CASTP20810 708 aaKnown RBP25.09■■□□□ 1.61
RNF38-205ENST00000377877 GSTO1P78417 241 aa25.09■■□□□ 1.61
RNF38-205ENST00000377877 ALX1Q15699 326 aa25.09■■□□□ 1.61
RNF38-205ENST00000377877 UTRNP46939 3433 aa25.08■■□□□ 1.61
RNF38-205ENST00000377877 USP17L3A6NCW0 530 aa25.08■■□□□ 1.61
RNF38-205ENST00000377877 USP17L4A6NCW7 530 aa25.08■■□□□ 1.61
RNF38-205ENST00000377877 GNAT2P19087 354 aa25.08■■□□□ 1.61
RNF38-205ENST00000377877 TMED8Q6PL24 325 aaPredicted RBP25.08■■□□□ 1.61
RNF38-205ENST00000377877 USP17L1Q7RTZ2 530 aa25.08■■□□□ 1.61
RNF38-205ENST00000377877 ZSWIM6Q9HCJ5 1215 aa25.08■■□□□ 1.61
RNF38-205ENST00000377877 TM6SF1Q9BZW5 370 aa25.07■■□□□ 1.6
RNF38-205ENST00000377877 LDHCP07864 332 aa25.07■■□□□ 1.6
RNF38-205ENST00000377877 IARSP41252 1262 aaKnown RBP25.07■■□□□ 1.6
RNF38-205ENST00000377877 TAOK3Q9H2K8 898 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms